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FFCP PHASE1:Mm9::chr7:26472500..26472559,+: Difference between revisions

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{{FFCP|EntrezGene=21803|HGNC=|MCL_coexpression_id=1376|UniProt=P04202,Q3UNK5|association_with_transcript=479bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end|description=CAGE_peak_3_at_Tgfb1_5end|id=chr7:26472500..26472559,+|ontology_enrichment_celltype=CL:0000988!1.01e-14!32;CL:0002032!1.01e-14!32;CL:0000037!1.01e-14!32;CL:0000566!1.01e-14!32;CL:0000837!1.01e-14!32;CL:0002320!2.30e-13!46;CL:0000134!2.30e-13!46;CL:0002031!2.51e-12!25;CL:0000049!4.75e-11!19;CL:0000219!7.47e-10!54;CL:0000763!1.76e-09!16;CL:0000839!7.47e-08!13;CL:0000738!2.10e-07!17;CL:0002087!2.10e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,7.67e-15,32;CL:0002032,7.67e-15,32;CL:0000037,7.67e-15,32;CL:0000837,7.67e-15,32;CL:0002320,7.31e-14,46;CL:0000134,7.31e-14,46;CL:0002031,2.01e-12,25;CL:0000049,3.90e-11,19;CL:0000219,1.58e-10,54;CL:0000763,1.49e-09,16;CL:0000839,6.56e-08,13;CL:0000738,1.86e-07,17;CL:0002087,1.86e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.99e-18!70;UBERON:0002193!9.39e-17!48;UBERON:0002390!1.24e-16!45;UBERON:0003061!1.24e-16!45;UBERON:0003081!3.08e-15!88;UBERON:0002384!2.30e-13!46;UBERON:0000926!6.98e-12!193;UBERON:0004120!6.98e-12!193;UBERON:0006603!6.98e-12!193;UBERON:0005057!7.50e-10!51;UBERON:0002371!1.01e-09!16;UBERON:0001474!5.10e-09!22;UBERON:0004765!5.10e-09!22;UBERON:0001434!5.10e-09!22;UBERON:0004177!2.58e-08!29;UBERON:0002204!4.16e-08!32;UBERON:0003104!8.22e-07!131;UBERON:0009142!8.22e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.54e-17,48;UBERON:0002405,3.54e-17,48;UBERON:0002390,4.62e-17,45;UBERON:0003061,4.62e-17,45;UBERON:0003081,6.89e-15,87;UBERON:0002384,7.31e-14,46;UBERON:0000926,1.40e-11,120;UBERON:0004120,1.40e-11,120;UBERON:0006603,1.40e-11,120;UBERON:0002371,8.52e-10,16;UBERON:0001474,2.24e-09,22;UBERON:0004765,2.24e-09,22;UBERON:0001434,2.24e-09,22;UBERON:0000077,2.37e-09,35;UBERON:0001041,9.81e-09,80;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0002204,2.15e-08,32|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,10.8463591690924,45.8971234214434,49.6216795802626,16.7793608860995,19.5441789538574,7.36163138704185,8.47977903464275,9.32707333083856,15.1856450542369,17.4890469532037,10.7257136221801,11.9289557236993,7.21462408056651,2.29616883407888,10.2269679736912,4.70159620450084,3.19984845586813,2.98232065387321,0,0,0,0.760093677825496,1.51218077855958,0.886922042621219,69.2183434070998,93.4898477128547,15.8481681015439,0,0.166234645358492,0.204169356262369,3.76678467663217,5.4693474116666,2.09409497589519,4.1176204162171,4.09827290975067,1.94204141212461,2.01434908760924,3.54819259268301,1.28482726513177,7.82391344348039,0.218025156380447,0,0.194429899074283,5.31948402176378,0,11.5769998179838,10.1550699881588,9.07453257684653,8.7468208252222,9.16907007804022,6.70373719960675,0.202316460859598,0.528990979272033,2.53532561402472,5.76035704517525,3.55717918444456,100.788768335517,129.541493496274,94.4938552878313,21.8708080678435,20.7477884873639,1.14058573539325,0.675029691658453,0.630974884054146,0.856952953211411,1.54607978666129,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0.791317726381163,0.457438218012048,0.52091337055676,0,0.56276261003168,1.06958773443767,0.883885756421003,0.854230084794618,0.931997229126503,2.80186915332781,2.72057616384428,9.27566363845369,3.44169550792555,0,0,0,0.448026887097336,5.89866564553358,11.930122580464,9.35229616570328,8.83348936275851,0,0,2.54805239706646,0,3.030874574157,3.04031838570118,4.04419556011827,3.08296475241462,27.188477782953,7.27366481417641,3.29622120855658,7.61163695780353,5.99600292865752,2.41156224884196,6.11461277105665,2.13633205260448,11.1237735480468,6.65157041831594,17.6922110389975,11.9707468961083,16.7839554029899,31.5168914537894,1.86391761218122,0.878342391034642,1.04723353406728,4.85368404896324,22.4054282826071,12.5979573508616,18.6793233797405,0.299581278809645,0.915001205637253,0.502617408451458,1.21677024134594,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,24.7569871514085,8.08712826987759,1.47309299120532,1.17108398666433,0.459804208866946,0.720248519221397,1.80845781402858,1.02054748726992,0.640568601424249,1.21812241927647,2.58703370739016,1.29340795759705,0.378212160335639,0.879755620819744,1.7535658594206,3.33656699070717,5.57203466435466,4.32142486456681,2.9855140022774,19.6619692447706,17.4996576838006,17.9023004619223,3.72826390563903,3.75241695969754,2.34080679899319,2.3674473558521,1.57411385397923,2.77680803197281,3.0229412817553,2.95100741539581,2.80236821681207,1.6455984991348,3.2833492815819,3.72916523910936,3.07019973593198,5.92785311285837,3.08674763148855,0,0.720332286654991,1.32167513193519,0.793351699990633,1.2797295032114,1.39342003116263,1.54640953586512,2.21851877085677,2.66853652613844,1.90225626112559,3.32170343081158,2.30578536613615,2.76468729680296,3.78017296878187,3.11942539390592,7.19055526923377,2.1613804987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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21803
|HGNC=
|MCL_coexpression_id=1376
|TSSclassifier=NA
|UniProt=uniprot:P04202,uniprot:Q3UNK5
|association_with_transcript=479bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end
|cluster_id=chr7:26472500..26472559,+
|description=CAGE_peak_3_at_Tgfb1_5end
|id=chr7:26472500..26472559,+
|ontology_enrichment_celltype=CL:0000988!1.01e-14!32;CL:0002032!1.01e-14!32;CL:0000037!1.01e-14!32;CL:0000566!1.01e-14!32;CL:0000837!1.01e-14!32;CL:0002320!2.30e-13!46;CL:0000134!2.30e-13!46;CL:0002031!2.51e-12!25;CL:0000049!4.75e-11!19;CL:0000219!7.47e-10!54;CL:0000763!1.76e-09!16;CL:0000839!7.47e-08!13;CL:0000738!2.10e-07!17;CL:0002087!2.10e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000988,7.67e-15,32;CL:0002032,7.67e-15,32;CL:0000037,7.67e-15,32;CL:0000837,7.67e-15,32;CL:0002320,7.31e-14,46;CL:0000134,7.31e-14,46;CL:0002031,2.01e-12,25;CL:0000049,3.90e-11,19;CL:0000219,1.58e-10,54;CL:0000763,1.49e-09,16;CL:0000839,6.56e-08,13;CL:0000738,1.86e-07,17;CL:0002087,1.86e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.99e-18!70;UBERON:0002193!9.39e-17!48;UBERON:0002390!1.24e-16!45;UBERON:0003061!1.24e-16!45;UBERON:0003081!3.08e-15!88;UBERON:0002384!2.30e-13!46;UBERON:0000926!6.98e-12!193;UBERON:0004120!6.98e-12!193;UBERON:0006603!6.98e-12!193;UBERON:0005057!7.50e-10!51;UBERON:0002371!1.01e-09!16;UBERON:0001474!5.10e-09!22;UBERON:0004765!5.10e-09!22;UBERON:0001434!5.10e-09!22;UBERON:0004177!2.58e-08!29;UBERON:0002204!4.16e-08!32;UBERON:0003104!8.22e-07!131;UBERON:0009142!8.22e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.54e-17,48;UBERON:0002405,3.54e-17,48;UBERON:0002390,4.62e-17,45;UBERON:0003061,4.62e-17,45;UBERON:0003081,6.89e-15,87;UBERON:0002384,7.31e-14,46;UBERON:0000926,1.40e-11,120;UBERON:0004120,1.40e-11,120;UBERON:0006603,1.40e-11,120;UBERON:0002371,8.52e-10,16;UBERON:0001474,2.24e-09,22;UBERON:0004765,2.24e-09,22;UBERON:0001434,2.24e-09,22;UBERON:0000077,2.37e-09,35;UBERON:0001041,9.81e-09,80;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0002204,2.15e-08,32
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,10.8463591690924,45.8971234214434,49.6216795802626,16.7793608860995,19.5441789538574,7.36163138704185,8.47977903464275,9.32707333083856,15.1856450542369,17.4890469532037,10.7257136221801,11.9289557236993,7.21462408056651,2.29616883407888,10.2269679736912,4.70159620450084,3.19984845586813,2.98232065387321,0,0,0,0.760093677825496,1.51218077855958,0.886922042621219,69.2183434070998,93.4898477128547,15.8481681015439,0,0.166234645358492,0.204169356262369,3.76678467663217,5.4693474116666,2.09409497589519,4.1176204162171,4.09827290975067,1.94204141212461,2.01434908760924,3.54819259268301,1.28482726513177,7.82391344348039,0.218025156380447,0,0.194429899074283,5.31948402176378,0,11.5769998179838,10.1550699881588,9.07453257684653,8.7468208252222,9.16907007804022,6.70373719960675,0.202316460859598,0.528990979272033,2.53532561402472,5.76035704517525,3.55717918444456,100.788768335517,129.541493496274,94.4938552878313,21.8708080678435,20.7477884873639,1.14058573539325,0.675029691658453,0.630974884054146,0.856952953211411,1.54607978666129,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0.791317726381163,0.457438218012048,0.52091337055676,0,0.56276261003168,1.06958773443767,0.883885756421003,0.854230084794618,0.931997229126503,2.80186915332781,2.72057616384428,9.27566363845369,3.44169550792555,0,0,0,0.448026887097336,5.89866564553358,11.930122580464,9.35229616570328,8.83348936275851,0,0,2.54805239706646,0,3.030874574157,3.04031838570118,4.04419556011827,3.08296475241462,27.188477782953,7.27366481417641,3.29622120855658,7.61163695780353,5.99600292865752,2.41156224884196,6.11461277105665,2.13633205260448,11.1237735480468,6.65157041831594,17.6922110389975,11.9707468961083,16.7839554029899,31.5168914537894,1.86391761218122,0.878342391034642,1.04723353406728,4.85368404896324,22.4054282826071,12.5979573508616,18.6793233797405,0.299581278809645,0.915001205637253,0.502617408451458,1.21677024134594,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,24.7569871514085,8.08712826987759,1.47309299120532,1.17108398666433,0.459804208866946,0.720248519221397,1.80845781402858,1.02054748726992,0.640568601424249,1.21812241927647,2.58703370739016,1.29340795759705,0.378212160335639,0.879755620819744,1.7535658594206,3.33656699070717,5.57203466435466,4.32142486456681,2.9855140022774,19.6619692447706,17.4996576838006,17.9023004619223,3.72826390563903,3.75241695969754,2.34080679899319,2.3674473558521,1.57411385397923,2.77680803197281,3.0229412817553,2.95100741539581,2.80236821681207,1.6455984991348,3.2833492815819,3.72916523910936,3.07019973593198,5.92785311285837,3.08674763148855,0,0.720332286654991,1.32167513193519,0.793351699990633,1.2797295032114,1.39342003116263,1.54640953586512,2.21851877085677,2.66853652613844,1.90225626112559,3.32170343081158,2.30578536613615,2.76468729680296,3.78017296878187,3.11942539390592,7.19055526923377,2.16138049874694,3.98282546508734,5.12103332573321,2.39921876480431,6.76246414038483,2.44381593414377,1.55161989734101,3.36651935473529,3.41477300470989,0.738050739898011,2.66897837330337,2.34454611451421,2.96452627087149,14.3486790915841,11.596980711679,17.3143826536337,14.2002084971952,14.9529839046498,7.63877555344259,12.6586300478357,19.4562272130042,10.4333337011471,14.3768206527355,16.3742016974142,9.98520553966594,6.31447194867779,2.51156378930677,5.78932225636041,14.041242452662,1.13694847062291,0.977789858652155,1.35796068620151,2.11221223459652,2.68010011906905,6.9032655856944,8.19561321002755,9.93101407869003,5.97954662051692,6.05928120898451,7.04612253277673,6.21665934717224,8.24499633914616,52.7769493787453,53.8466626980522,4.42587845717133,4.96686143348518,0.642202359951168,0.586058432961016,1.63934945376675,5.55436039849621,0.631016438832513,1.95219372148319,0.646270193198397,1.19484398976276,4.23317480756549,1.69845918473299,0.809621403349789,2.92255857911312,3.16230222357219,2.89189184779626,8.23252494207958,2.13678724400706,2.11753047159649,3.62934270539578,1.32745138339963,1.69946445308487,0.302323556964751,1.88605079755898,2.65771703592696,3.68922177532713,2.32585463851399,1.81766864738753,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,0.340439605753788,1.62054984628179,2.97524972700335,2.14337035031592,3.19212420556092,2.49716344642899,2.30368628842969,4.26250928760439,8.68285319835728,5.50763384245932,1.54369878638473,5.93590510589328,7.10443477461984,5.1869115438214,3.9392873521035,3.61109979439135,5.24665505933731,0.370850604021019,32.6363382323899,16.5109494370578,16.1119238811649,20.1554248995019,23.6481013957374,18.5310320297283,33.4857507087895,31.2091738681757,36.3465931105635,0,2.37251995185852,2.23651413839534,2.80813886136683,3.13632444021703,2.83871332870031,1.88810084938749,4.87655388779482,2.35580347785627,2.72191443912765,3.72803587852155,1.69107881605257,2.0932316446157,2.15096037594227,1.36115831840833,1.54991788173277,2.87225413334323,1.87771581833206,1.0416350787516,2.41176492179135,1.69108884578204,1.72818003754719,15.4845449107807,9.93353554921804,7.29247795870273,7.40548690973432,7.51912121803422,8.14593554603186,7.21172697119813,9.30444021199837,7.57248374611107,7.62068066549998,6.85618058930516,10.0381617161945,8.94770127255064,8.2982600548914,4.0811469050738,0.221985953374065,1.16628013592318,3.52557694364565,6.76163579112667,15.3899629869969,3.47988086107804,12.0046292284277,1.00314420807073,0,0,2.29158205375759,0.68741272937475,0.685082519770642,0.755393897389701,0,1.35096360967266,0.453142408984205,0,0.207574695168353,0.798049746802062,1.02440163452481,5.34834777550247,2.72497111416377,0.919217542250071,3.77819437262746,2.47242068686673,1.92551525755089,3.79045817645696,4.30914809813408,5.09291121742406,4.30750934361459,4.09760975391163,3.56099907524802,2.85776214769844,4.1718357340148,2.70072908649187,5.76920261124629,3.23837624295674,2.74295401908332,3.90446773550542,4.5302876089991,4.65108533223451,3.29382831453657,3.89227196301712,4.39027134894654,5.26139422875686,3.39510284614654,3.92799590160417,2.72860541685601,3.05363895364247,3.27384834535751,4.02835787083512,5.20847849649082,8.24374907195222,6.08222181958062,7.30561583764214,10.1382815996487,13.2354851471709,10.2021847672985
|short_description=p3@Tgfb1
}}

Revision as of 20:43, 4 August 2015

Short description:p3@Tgfb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tgfb1_5end
Coexpression cluster:MCL_coexpression_mm9:1376
Association with transcript: 479bp_to_ENSMUST00000002678, NM_011577, uc009ftq.1_5end
EntrezGene:21803
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tgfb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E745.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F249.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.78
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.19
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I369.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G693.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7100.79
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7129.54
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D294.49
Mouse Microglia, donor1.CNhs12629.11718-123C821.87
Mouse Microglia, donor2.CNhs12634.11736-123E820.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H927.19
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F511.97
bone (os femoris), neonate N16.CNhs11225.1525-43A616.78
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.41
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.68
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.76
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.50
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.90
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F814.35
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E117.31
liver, embryo E15.CNhs10520.433-16D714.20
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F419.46
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E59.93
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H28.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A153.85
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G232.64
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F216.11
spleen, neonate N10.CNhs11116.752-24D120.16
spleen, neonate N20.CNhs11112.824-19H123.65
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C633.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B515.48
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I27.29
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F87.21
thymus, neonate N03.CNhs11137.2104-43C79.30
thymus, neonate N06.CNhs11197.681-26C47.57
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G78.95
thymus, neonate N30.CNhs11132.1393-42G28.30
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F515.39
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D113.24
whole body, neonate N10.CNhs10518.761-6B410.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.54e-1748
immune system3.54e-1748
hematopoietic system4.62e-1745
blood island4.62e-1745
lateral plate mesoderm6.89e-1587
connective tissue7.31e-1446
mesoderm1.40e-11120
mesoderm-derived structure1.40e-11120
presumptive mesoderm1.40e-11120
bone marrow8.52e-1016
bone element2.24e-0922
skeletal element2.24e-0922
skeletal system2.24e-0922
mixed endoderm/mesoderm-derived structure2.37e-0935
foregut9.81e-0980
hemopoietic organ1.28e-0829
immune organ1.28e-0829
musculoskeletal system2.15e-0832
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