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FFCP PHASE1:Mm9::chr4:130374681..130374703,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1087
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:130374681..130374703,+
|description=CAGE_peak_at_chr4:130374681..130374703,+
|description=CAGE_peak_at_chr4:130374681..130374703,+
|id=chr4:130374681..130374703,+
|id=chr4:130374681..130374703,+
|ontology_enrichment_celltype=CL:0000055!4.82e-12!50;CL:0000393!2.04e-11!39;CL:0000211!2.04e-11!39;CL:0002319!6.99e-11!43;CL:0000221!7.91e-11!44;CL:0000133!7.91e-11!44;CL:0000540!9.24e-11!33;CL:0000047!9.24e-11!33;CL:0000031!9.24e-11!33;CL:0000404!9.24e-11!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23
|ontology_enrichment_celltype=CL:0000055!4.82e-12!50;CL:0000393!2.04e-11!39;CL:0000211!2.04e-11!39;CL:0002319!6.99e-11!43;CL:0000221!7.91e-11!44;CL:0000133!7.91e-11!44;CL:0000540!9.24e-11!33;CL:0000047!9.24e-11!33;CL:0000031!9.24e-11!33;CL:0000404!9.24e-11!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000393,9.04e-24,39;CL:0000211,9.04e-24,39;CL:0000117,3.62e-23,23;CL:0000337,3.62e-23,23;CL:0000540,2.53e-22,33;CL:0000047,2.53e-22,33;CL:0000031,2.53e-22,33;CL:0000404,2.53e-22,33;CL:0002319,2.77e-21,43;CL:0000221,1.22e-20,44;CL:0000133,1.22e-20,44;CL:0002321,7.68e-14,70;CL:0000723,1.26e-13,91;CL:0000048,1.26e-13,91;CL:0000034,2.95e-12,97;CL:0002194,1.10e-08,4;CL:0000766,1.10e-08,4;CL:0000234,1.10e-08,4;CL:0000576,1.10e-08,4;CL:0000235,1.10e-08,4;CL:0000864,1.10e-08,4;CL:0002009,1.10e-08,4;CL:0000040,1.10e-08,4;CL:0000559,1.10e-08,4;CL:0002092,3.12e-07,3;CL:0002540,3.12e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.29e-16!75;UBERON:0001016!1.29e-16!75;UBERON:0001017!4.06e-16!73;UBERON:0005743!4.06e-16!73;UBERON:0004121!4.02e-15!102;UBERON:0000924!4.02e-15!102;UBERON:0006601!4.02e-15!102;UBERON:0002346!2.22e-11!71;UBERON:0003075!2.22e-11!71;UBERON:0007284!2.22e-11!71;UBERON:0001049!8.18e-10!52;UBERON:0005068!8.18e-10!52;UBERON:0006241!8.18e-10!52;UBERON:0007135!8.18e-10!52;UBERON:0002020!1.48e-09!34;UBERON:0000955!1.87e-08!50;UBERON:0006238!1.87e-08!50;UBERON:0002616!4.28e-08!49;UBERON:0002791!7.73e-07!29;UBERON:0003528!7.73e-07!29;UBERON:0001893!7.73e-07!29;UBERON:0000033!8.38e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-22,73;UBERON:0001016,1.49e-21,75;UBERON:0002020,6.98e-16,34;UBERON:0004121,4.35e-15,95;UBERON:0000924,4.35e-15,95;UBERON:0006601,4.35e-15,95;UBERON:0000073,9.07e-14,54;UBERON:0001049,4.63e-12,52;UBERON:0005068,4.63e-12,52;UBERON:0006241,4.63e-12,52;UBERON:0007135,4.63e-12,52;UBERON:0002240,3.98e-11,6;UBERON:0005174,3.98e-11,6;UBERON:0001137,3.98e-11,6;UBERON:0002346,9.72e-11,64;UBERON:0003075,9.72e-11,64;UBERON:0007284,9.72e-11,64;UBERON:0003528,8.80e-10,29;UBERON:0002791,8.80e-10,29;UBERON:0001893,8.80e-10,29;UBERON:0001948,1.08e-09,5;UBERON:0002315,1.08e-09,5;UBERON:0010314,1.45e-09,92;UBERON:0002420,2.61e-09,8;UBERON:0007245,2.61e-09,8;UBERON:0010009,2.61e-09,8;UBERON:0010011,2.61e-09,8;UBERON:0000454,2.61e-09,8;UBERON:0010371,1.18e-08,73;UBERON:0003080,4.59e-07,40;UBERON:0003076,8.20e-07,12;UBERON:0003057,8.20e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,1.28629718017973,2.0057340795713,1.54701627683233,1.41621522601718,4.7609188134483,1.26766280701236,0.338844532069132,0.889294796111139,10.7987966073768,17.7995945262055,9.2362414942993,6.2916023208865,3.84218305321555,1.65903379693564,2.43010688997043,0,2.85650984403804,4.8591079009355,0.734944795289724,0.479227355091182,0,1.10115880999389,1.65993539510744,1.22885226604995,2.37395317914349,3.01909223887952,1.04182674111352,1.3959149950069,1.12552522006336,2.59757021220577,7.36571463684169,4.27115042397309,1.3047961207771,0.681535739998656,0.453429360640713,0,0.860423876981386,0,0.539703191637817,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,7.25026074212081,1.48442139064825,0.520455980298408,0.913396434936424,0.922461989024234,2.11011696773672,0.823120949949934,0.628332956648377,0,1.01219549843938,0.884610551949874,0.323533699894818,0.441683036920787,1.45462575940567,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,1.04853447583376,0.457500602818626,1.00523481690292,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.816437989815934,0.640568601424249,0.655912071918102,0,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0.834141747676794,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.583826711835847,0.16455984991348,0.32833492815819,0.162137619091711,0,0.878200461164203,0,0.420579897128254,0.720332286654991,0,0.264450566663544,0,0,0.515469845288373,0.403367049246685,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0,0,1.1858105083486,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0,0,7.18841032636773,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.157635144106191,0.664394068946325,0,0.327726629431476,0.345369963731791,0.144649058581512,13.5712155545345,5.98296252200581,0.491764273019036,0,0.80275294993896,0.820481806145422,0,0,0,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,0,2.42886421004937,1.16902343164525,0.790575555893047,0.963963949265421,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,1.8542530201051,0.512612642393558,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,0.686334519619568,0,0,0,1.90934123603023,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.523511883968059,0.129614973291793,0,1.12738587736838,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.209718688851422,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.487289403698762,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0,0,3.95326289831947,0.920650473014354,3.43737308063638,2.06223818812425,0,1.5107877947794,0,0.45032120322422,1.35942722695261,1.03552062350364,0.103787347584177,0.798049746802062,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,0,0.842773567228942,0.320125762024346,0.229741875822453,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0,0,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,1.28629718017973,2.0057340795713,1.54701627683233,1.41621522601718,4.7609188134483,1.26766280701236,0.338844532069132,0.889294796111139,10.7987966073768,17.7995945262055,9.2362414942993,6.2916023208865,3.84218305321555,1.65903379693564,2.43010688997043,0,2.85650984403804,4.8591079009355,0.734944795289724,0.479227355091182,0,1.10115880999389,1.65993539510744,1.22885226604995,2.37395317914349,3.01909223887952,1.04182674111352,1.3959149950069,1.12552522006336,2.59757021220577,7.36571463684169,4.27115042397309,1.3047961207771,0.681535739998656,0.453429360640713,0,0.860423876981386,0,0.539703191637817,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,7.25026074212081,1.48442139064825,0.520455980298408,0.913396434936424,0.922461989024234,2.11011696773672,0.823120949949934,0.628332956648377,0,1.01219549843938,0.884610551949874,0.323533699894818,0.441683036920787,1.45462575940567,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,1.04853447583376,0.457500602818626,1.00523481690292,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.816437989815934,0.640568601424249,0.655912071918102,0,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0.834141747676794,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.583826711835847,0.16455984991348,0.32833492815819,0.162137619091711,0,0.878200461164203,0,0.420579897128254,0.720332286654991,0,0.264450566663544,0,0,0.515469845288373,0.403367049246685,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0,0,1.1858105083486,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0,0,7.18841032636773,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.157635144106191,0.664394068946325,0,0.327726629431476,0.345369963731791,0.144649058581512,13.5712155545345,5.98296252200581,0.491764273019036,0,0.80275294993896,0.820481806145422,0,0,0,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,0,2.42886421004937,1.16902343164525,0.790575555893047,0.963963949265421,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,1.8542530201051,0.512612642393558,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,0.686334519619568,0,0,0,1.90934123603023,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.523511883968059,0.129614973291793,0,1.12738587736838,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.209718688851422,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.487289403698762,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0,0,3.95326289831947,0.920650473014354,3.43737308063638,2.06223818812425,0,1.5107877947794,0,0.45032120322422,1.35942722695261,1.03552062350364,0.103787347584177,0.798049746802062,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,0,0.842773567228942,0.320125762024346,0.229741875822453,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0,0,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p@chr4:130374681..130374703,+
|short_description=p@chr4:130374681..130374703,+
}}
}}

Latest revision as of 20:19, 4 August 2015

Short description:p@chr4:130374681..130374703, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:130374681..130374703, +
Coexpression cluster:MCL_coexpression_mm9:1087
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:130374681..130374703+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.13e-2273
nervous system1.49e-2175
gray matter6.98e-1634
ectoderm-derived structure4.35e-1595
ectoderm4.35e-1595
presumptive ectoderm4.35e-1595
regional part of nervous system9.07e-1454
neural tube4.63e-1252
neural rod4.63e-1252
future spinal cord4.63e-1252
neural keel4.63e-1252
spinal cord3.98e-116
dorsal region element3.98e-116
dorsum3.98e-116
neurectoderm9.72e-1164
neural plate9.72e-1164
presumptive neural plate9.72e-1164
brain grey matter8.80e-1029
regional part of telencephalon8.80e-1029
telencephalon8.80e-1029
regional part of spinal cord1.08e-095
gray matter of spinal cord1.08e-095
structure with developmental contribution from neural crest1.45e-0992
basal ganglion2.61e-098
nuclear complex of neuraxis2.61e-098
aggregate regional part of brain2.61e-098
collection of basal ganglia2.61e-098
cerebral subcortex2.61e-098
ecto-epithelium1.18e-0873
anterior neural tube4.59e-0740
posterior neural tube8.20e-0712
chordal neural plate8.20e-0712
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