FFCP PHASE1:Mm9::chr12:115752018..115752033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=192 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_ENSMUST00000103494_5end | |association_with_transcript=-184bp_to_ENSMUST00000103494_5end | ||
|cluster_id=chr12:115752018..115752033,- | |||
|description=CAGE_peak_1_at_ENSMUST00000103494_5end | |description=CAGE_peak_1_at_ENSMUST00000103494_5end | ||
|id=chr12:115752018..115752033,- | |id=chr12:115752018..115752033,- | ||
|ontology_enrichment_celltype=CL:0000553!5.77e-10!6;CL:0000556!5.77e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.47e-16,6;CL:0000556,8.47e-16,6;CL:0000050,2.83e-10,9;CL:0002027,1.24e-08,3;CL:0002006,1.24e-08,3;CL:0002024,1.24e-08,3;CL:0000839,7.15e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-13!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.11e-13,51;UBERON:0002465,2.48e-09,3;UBERON:0002193,9.12e-08,48;UBERON:0002405,9.12e-08,48;UBERON:0004923,5.64e-07,24;UBERON:0002106,6.91e-07,6;UBERON:0004457,6.91e-07,6;UBERON:0000042,6.91e-07,6;UBERON:0004854,6.91e-07,6;UBERON:0009034,6.91e-07,6;UBERON:0002095,6.91e-07,6;UBERON:0004782,6.91e-07,6;UBERON:0003281,6.91e-07,6;UBERON:0009664,6.91e-07,6;UBERON:0002296,6.91e-07,6;UBERON:0005602,6.91e-07,6;UBERON:0001179,6.91e-07,6;UBERON:0006293,6.91e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,26.648780945253,11.1361397064404,5.59649502502517,16.8772258466657,16.5908464662944,11.4585205985468,1.44573593256819,0,0,62.8770221578088,51.3876789590461,0,0,0,0.950117097281869,1.76421090831952,3.76941868114018,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7648693330808,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,5.36664234679582,93.2176381129818,0.148442139064825,0,0,0,0,0,0,0,1.01219549843938,3.5384422077995,0,0.662524555381181,1.45462575940567,11.1835056730873,0,0,30.654846625031,0,0,0,0,0,0,0,0,0.20778804455956,0,0,1.99051152976149,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,17.982638533121,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.648540907100142,0,0,0,0,0,0.179397413521912,0,4.24932337383191,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.690739927463582,0.433947175744535,0,0,1.47529281905711,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0.291480836629851,0,54.3369400937172,0,0,1.88368457004691,3.14396723758358,4.11800711771741,2.71965487990169,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,9.94142900939081,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0,0,0,0,0,0,0,0,0.100826185136841,0.38983152295901,0.769694733122636,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,26.648780945253,11.1361397064404,5.59649502502517,16.8772258466657,16.5908464662944,11.4585205985468,1.44573593256819,0,0,62.8770221578088,51.3876789590461,0,0,0,0.950117097281869,1.76421090831952,3.76941868114018,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7648693330808,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,5.36664234679582,93.2176381129818,0.148442139064825,0,0,0,0,0,0,0,1.01219549843938,3.5384422077995,0,0.662524555381181,1.45462575940567,11.1835056730873,0,0,30.654846625031,0,0,0,0,0,0,0,0,0.20778804455956,0,0,1.99051152976149,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,17.982638533121,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.648540907100142,0,0,0,0,0,0.179397413521912,0,4.24932337383191,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.690739927463582,0.433947175744535,0,0,1.47529281905711,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0.291480836629851,0,54.3369400937172,0,0,1.88368457004691,3.14396723758358,4.11800711771741,2.71965487990169,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,9.94142900939081,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0,0,0,0,0,0,0,0,0.100826185136841,0.38983152295901,0.769694733122636,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000103494 | |short_description=p1@ENSMUST00000103494 | ||
}} | }} |
Latest revision as of 20:16, 4 August 2015
Short description: | p1@ENSMUST00000103494 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103494_5end |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | -184bp_to_ENSMUST00000103494_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.47e-16 | 6 |
megakaryocyte | 8.47e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 2.83e-10 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.24e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.24e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.24e-08 | 3 |
myeloid lineage restricted progenitor cell | 7.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.11e-13 | 51 |
lymphoid system | 2.48e-09 | 3 |
hemolymphoid system | 9.12e-08 | 48 |
immune system | 9.12e-08 | 48 |
organ component layer | 5.64e-07 | 24 |
spleen | 6.91e-07 | 6 |
cavity lining | 6.91e-07 | 6 |
serous membrane | 6.91e-07 | 6 |
gastrointestinal system mesentery | 6.91e-07 | 6 |
stomach region | 6.91e-07 | 6 |
mesentery | 6.91e-07 | 6 |
gastrointestinal system serosa | 6.91e-07 | 6 |
mesentery of stomach | 6.91e-07 | 6 |
gut mesentery | 6.91e-07 | 6 |
dorsal mesentery | 6.91e-07 | 6 |
dorsal mesogastrium | 6.91e-07 | 6 |
peritoneal cavity | 6.91e-07 | 6 |
spleen primordium | 6.91e-07 | 6 |