FFCP PHASE1:Mm9::chr12:115596467..115596481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2773 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENSMUST00000125484_5end | |association_with_transcript=-38bp_to_ENSMUST00000125484_5end | ||
|cluster_id=chr12:115596467..115596481,- | |||
|description=CAGE_peak_1_at_ENSMUST00000125484_5end | |description=CAGE_peak_1_at_ENSMUST00000125484_5end | ||
|id=chr12:115596467..115596481,- | |id=chr12:115596467..115596481,- | ||
|ontology_enrichment_celltype=CL:0000553!3.61e-09!6;CL:0000556!3.61e-09!6 | |ontology_enrichment_celltype=CL:0000553!3.61e-09!6;CL:0000556!3.61e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.35e-19,6;CL:0000556,2.35e-19,6;CL:0000050,1.12e-12,9;CL:0002027,3.46e-10,3;CL:0002006,3.46e-10,3;CL:0002024,3.46e-10,3;CL:0000839,1.46e-08,13;CL:0000763,8.01e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-10!51;UBERON:0003887!3.30e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.16e-12,48;UBERON:0002405,8.16e-12,48;UBERON:0002465,2.61e-10,3;UBERON:0002106,1.25e-08,6;UBERON:0004457,1.25e-08,6;UBERON:0000042,1.25e-08,6;UBERON:0004854,1.25e-08,6;UBERON:0009034,1.25e-08,6;UBERON:0002095,1.25e-08,6;UBERON:0004782,1.25e-08,6;UBERON:0003281,1.25e-08,6;UBERON:0009664,1.25e-08,6;UBERON:0002296,1.25e-08,6;UBERON:0005602,1.25e-08,6;UBERON:0001179,1.25e-08,6;UBERON:0006293,1.25e-08,6;UBERON:0001474,5.45e-08,22;UBERON:0004765,5.45e-08,22;UBERON:0001434,5.45e-08,22;UBERON:0002390,8.69e-08,45;UBERON:0003061,8.69e-08,45;UBERON:0003887,1.51e-07,10;UBERON:0001155,2.73e-07,2;UBERON:0000059,2.73e-07,2;UBERON:0001962,3.38e-07,2;UBERON:0001961,3.38e-07,2;UBERON:0001744,3.38e-07,2;UBERON:0002371,8.01e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9879271380458,6.88415909125408,3.49780939064073,68.4552898827376,22.8981104121584,15.7024171165271,0.595303031057488,0,0,6.23970448894286,4.81759490241057,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89917375740644,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,43.760502336372,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0.884610551949874,0,1.76673214768315,1.45462575940567,3.72783522436244,0,0,10.4737392635522,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,2.90895623329899,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,3.45820879799511,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.797273843287435,1.14704320301017,0.690739927463582,1.15719246865209,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,5.30980553359851,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0.291480836629851,0,29.048049735635,0,0.185194527369712,3.01389531207506,7.38148829693536,5.26189798375002,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,1.55932609183604,0.481059208201647,3.27255326108393,0,0,0,0,3.47741269257943,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9879271380458,6.88415909125408,3.49780939064073,68.4552898827376,22.8981104121584,15.7024171165271,0.595303031057488,0,0,6.23970448894286,4.81759490241057,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89917375740644,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,43.760502336372,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0.884610551949874,0,1.76673214768315,1.45462575940567,3.72783522436244,0,0,10.4737392635522,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,2.90895623329899,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,3.45820879799511,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.797273843287435,1.14704320301017,0.690739927463582,1.15719246865209,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,5.30980553359851,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0.291480836629851,0,29.048049735635,0,0.185194527369712,3.01389531207506,7.38148829693536,5.26189798375002,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,1.55932609183604,0.481059208201647,3.27255326108393,0,0,0,0,3.47741269257943,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p1@ENSMUST00000125484 | |short_description=p1@ENSMUST00000125484 | ||
}} | }} |
Latest revision as of 20:13, 4 August 2015
Short description: | p1@ENSMUST00000125484 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000125484_5end |
Coexpression cluster: | MCL_coexpression_mm9:2773 |
Association with transcript: | -38bp_to_ENSMUST00000125484_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.35e-19 | 6 |
megakaryocyte | 2.35e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 1.12e-12 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.46e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.46e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.46e-10 | 3 |
myeloid lineage restricted progenitor cell | 1.46e-08 | 13 |
myeloid cell | 8.01e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.16e-12 | 48 |
immune system | 8.16e-12 | 48 |
lymphoid system | 2.61e-10 | 3 |
spleen | 1.25e-08 | 6 |
cavity lining | 1.25e-08 | 6 |
serous membrane | 1.25e-08 | 6 |
gastrointestinal system mesentery | 1.25e-08 | 6 |
stomach region | 1.25e-08 | 6 |
mesentery | 1.25e-08 | 6 |
gastrointestinal system serosa | 1.25e-08 | 6 |
mesentery of stomach | 1.25e-08 | 6 |
gut mesentery | 1.25e-08 | 6 |
dorsal mesentery | 1.25e-08 | 6 |
dorsal mesogastrium | 1.25e-08 | 6 |
peritoneal cavity | 1.25e-08 | 6 |
spleen primordium | 1.25e-08 | 6 |
bone element | 5.45e-08 | 22 |
skeletal element | 5.45e-08 | 22 |
skeletal system | 5.45e-08 | 22 |
hematopoietic system | 8.69e-08 | 45 |
blood island | 8.69e-08 | 45 |
intraembryonic coelom | 1.51e-07 | 10 |
colon | 2.73e-07 | 2 |
large intestine | 2.73e-07 | 2 |
gut-associated lymphoid tissue | 3.38e-07 | 2 |
mucosa-associated lymphoid tissue | 3.38e-07 | 2 |
lymphoid tissue | 3.38e-07 | 2 |
bone marrow | 8.01e-07 | 16 |