FFCP PHASE1:Mm9::chr2:24331085..24331100,-: Difference between revisions
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{{FFCP|EntrezGene=18510|HGNC=|MCL_coexpression_id=514|UniProt=A2AIU7,Q00288|association_with_transcript=0bp_to_ENSMUST00000136228,ENSMUST00000152614,NM_011040,uc008ipb.1_5end|description=CAGE_peak_1_at_Pax8_5end|id=chr2:24331085..24331100,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!5.49e-17!21;UBERON:0003133!8.81e-14!24;UBERON:0005156!1.04e-13!26;UBERON:0000990!1.04e-13!26;UBERON:0002113!1.48e-13!14;UBERON:0003918!1.48e-13!14;UBERON:0005095!1.48e-13!14;UBERON:0007687!1.48e-13!14;UBERON:0001008!7.78e-12!17;UBERON:0006554!4.29e-11!16;UBERON:0000991!1.54e-10!18;UBERON:0005564!1.54e-10!18;UBERON:0004176!9.74e-10!17;UBERON:0009196!9.74e-10!17;UBERON:0009117!9.74e-10!17;UBERON:0003135!2.10e-08!15;UBERON:0003101!1.39e-07!16;UBERON:0000079!1.39e-07!16;UBERON:0000473!1.62e-07!14;UBERON:0000474!8.94e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.27e-24,21;UBERON:0002113,8.07e-19,14;UBERON:0003918,8.07e-19,14;UBERON:0011143,8.07e-19,14;UBERON:0005095,8.07e-19,14;UBERON:0007687,8.07e-19,14;UBERON:0001008,8.34e-17,19;UBERON:0006554,9.65e-16,18;UBERON:0005156,1.72e-15,26;UBERON:0000990,1.72e-15,26;UBERON:0003133,3.28e-15,24;UBERON:0000991,1.84e-10,18;UBERON:0005564,1.84e-10,18;UBERON:0004176,2.07e-09,17;UBERON:0009196,2.07e-09,17;UBERON:0009117,2.07e-09,17;UBERON:0000474,2.29e-09,9;UBERON:0004175,5.33e-09,9;UBERON:0003103,2.08e-08,43;UBERON:0003134,3.59e-08,8;UBERON:0002240,3.90e-08,6;UBERON:0005174,3.90e-08,6;UBERON:0001137,3.90e-08,6;UBERON:0003135,1.17e-07,15;UBERON:0003100,2.69e-07,11;UBERON:0001948,3.84e-07,5;UBERON:0002315,3.84e-07,5;UBERON:0003101,5.16e-07,16;UBERON:0000079,5.16e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2872727453797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41654801007919,3.4997381833371,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,5.14171771926846,6.62605622854841,0,0,0,1.10115880999389,0.383062014255563,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,10.9012576625257,10.5355043791336,16.5895506784518,0.075726193333184,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,10.6191008138726,0,0,0.173485326766136,0,1.61430848079241,0.150722640552623,0.352766121407114,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,9.3692214742291,16.2973131499222,70.2569268445616,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0,14.3304672109315,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,29.9675283505869,31.5325894802852,39.4477074855781,31.9732584717143,36.4630675875136,55.477433533242,43.1273183187435,50.0398401650851,46.1576259853642,49.8524542244074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,9.36804562374573,9.25941139069727,9.44744364250741,26.8901300445233,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0.164549020602121,0,0,7.41412248023371,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,1.34564891439581,1.48912641411388,2.52786544847262,2.71235629303235,0.844780627453891,3.52071715937262,2.0832701575032,0.838874755405687,0.483168241652012,2.01621004380506,0,1.62180172232131,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,62.873629276146,29.6705631312969,5.57357785605571,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.03787347584177,4.38927360741134,2.21953687480374,0,0.838452650511929,0.367687016900028,1.11123363900808,1.03017528619447,0.64183841918363,1.76888048234658,1.01391719956096,1.50901073108861,2.1537546718073,1.02440243847791,1.83793500657962,1.90517476513229,2.0859178670074,0.578727661391115,2.47251540481984,1.32479028120958,0.685738504770831,2.48466128623072,2.62279808942053,1.16277133305863,1.31753132581463,1.4384483341585,0.182927972872773,1.05227884575137,1.49384525230448,1.12228454331548,1.54225523561426,2.1670986122624,0.818462086339379,2.16911577660352,0.385813221962283,0.749431733813838,0.467863216890817,1.71896843238639,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p1@Pax8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18510 | |||
|HGNC= | |||
|MCL_coexpression_id=514 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AIU7,uniprot:Q00288 | |||
|association_with_transcript=0bp_to_ENSMUST00000136228,ENSMUST00000152614,NM_011040,uc008ipb.1_5end | |||
|cluster_id=chr2:24331085..24331100,- | |||
|description=CAGE_peak_1_at_Pax8_5end | |||
|id=chr2:24331085..24331100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!5.49e-17!21;UBERON:0003133!8.81e-14!24;UBERON:0005156!1.04e-13!26;UBERON:0000990!1.04e-13!26;UBERON:0002113!1.48e-13!14;UBERON:0003918!1.48e-13!14;UBERON:0005095!1.48e-13!14;UBERON:0007687!1.48e-13!14;UBERON:0001008!7.78e-12!17;UBERON:0006554!4.29e-11!16;UBERON:0000991!1.54e-10!18;UBERON:0005564!1.54e-10!18;UBERON:0004176!9.74e-10!17;UBERON:0009196!9.74e-10!17;UBERON:0009117!9.74e-10!17;UBERON:0003135!2.10e-08!15;UBERON:0003101!1.39e-07!16;UBERON:0000079!1.39e-07!16;UBERON:0000473!1.62e-07!14;UBERON:0000474!8.94e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.27e-24,21;UBERON:0002113,8.07e-19,14;UBERON:0003918,8.07e-19,14;UBERON:0011143,8.07e-19,14;UBERON:0005095,8.07e-19,14;UBERON:0007687,8.07e-19,14;UBERON:0001008,8.34e-17,19;UBERON:0006554,9.65e-16,18;UBERON:0005156,1.72e-15,26;UBERON:0000990,1.72e-15,26;UBERON:0003133,3.28e-15,24;UBERON:0000991,1.84e-10,18;UBERON:0005564,1.84e-10,18;UBERON:0004176,2.07e-09,17;UBERON:0009196,2.07e-09,17;UBERON:0009117,2.07e-09,17;UBERON:0000474,2.29e-09,9;UBERON:0004175,5.33e-09,9;UBERON:0003103,2.08e-08,43;UBERON:0003134,3.59e-08,8;UBERON:0002240,3.90e-08,6;UBERON:0005174,3.90e-08,6;UBERON:0001137,3.90e-08,6;UBERON:0003135,1.17e-07,15;UBERON:0003100,2.69e-07,11;UBERON:0001948,3.84e-07,5;UBERON:0002315,3.84e-07,5;UBERON:0003101,5.16e-07,16;UBERON:0000079,5.16e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2872727453797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41654801007919,3.4997381833371,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,5.14171771926846,6.62605622854841,0,0,0,1.10115880999389,0.383062014255563,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,10.9012576625257,10.5355043791336,16.5895506784518,0.075726193333184,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,10.6191008138726,0,0,0.173485326766136,0,1.61430848079241,0.150722640552623,0.352766121407114,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,9.3692214742291,16.2973131499222,70.2569268445616,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0,14.3304672109315,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,29.9675283505869,31.5325894802852,39.4477074855781,31.9732584717143,36.4630675875136,55.477433533242,43.1273183187435,50.0398401650851,46.1576259853642,49.8524542244074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,9.36804562374573,9.25941139069727,9.44744364250741,26.8901300445233,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0.164549020602121,0,0,7.41412248023371,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,1.34564891439581,1.48912641411388,2.52786544847262,2.71235629303235,0.844780627453891,3.52071715937262,2.0832701575032,0.838874755405687,0.483168241652012,2.01621004380506,0,1.62180172232131,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,62.873629276146,29.6705631312969,5.57357785605571,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.03787347584177,4.38927360741134,2.21953687480374,0,0.838452650511929,0.367687016900028,1.11123363900808,1.03017528619447,0.64183841918363,1.76888048234658,1.01391719956096,1.50901073108861,2.1537546718073,1.02440243847791,1.83793500657962,1.90517476513229,2.0859178670074,0.578727661391115,2.47251540481984,1.32479028120958,0.685738504770831,2.48466128623072,2.62279808942053,1.16277133305863,1.31753132581463,1.4384483341585,0.182927972872773,1.05227884575137,1.49384525230448,1.12228454331548,1.54225523561426,2.1670986122624,0.818462086339379,2.16911577660352,0.385813221962283,0.749431733813838,0.467863216890817,1.71896843238639,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Pax8 | |||
}} |
Revision as of 20:02, 4 August 2015
Short description: | p1@Pax8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pax8_5end |
Coexpression cluster: | MCL_coexpression_mm9:514 |
Association with transcript: | 0bp_to_ENSMUST00000136228, ENSMUST00000152614, NM_011040, uc008ipb.1_5end |
EntrezGene: | 18510 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 4.27e-24 | 21 |
kidney | 8.07e-19 | 14 |
kidney mesenchyme | 8.07e-19 | 14 |
upper urinary tract | 8.07e-19 | 14 |
kidney rudiment | 8.07e-19 | 14 |
kidney field | 8.07e-19 | 14 |
renal system | 8.34e-17 | 19 |
urinary system structure | 9.65e-16 | 18 |
reproductive structure | 1.72e-15 | 26 |
reproductive system | 1.72e-15 | 26 |
reproductive organ | 3.28e-15 | 24 |
gonad | 1.84e-10 | 18 |
gonad primordium | 1.84e-10 | 18 |
external genitalia | 2.07e-09 | 17 |
indifferent external genitalia | 2.07e-09 | 17 |
indifferent gonad | 2.07e-09 | 17 |
female reproductive system | 2.29e-09 | 9 |
internal genitalia | 5.33e-09 | 9 |
compound organ | 2.08e-08 | 43 |
female reproductive organ | 3.59e-08 | 8 |
spinal cord | 3.90e-08 | 6 |
dorsal region element | 3.90e-08 | 6 |
dorsum | 3.90e-08 | 6 |
male reproductive organ | 1.17e-07 | 15 |
female organism | 2.69e-07 | 11 |
regional part of spinal cord | 3.84e-07 | 5 |
gray matter of spinal cord | 3.84e-07 | 5 |
male organism | 5.16e-07 | 16 |
male reproductive system | 5.16e-07 | 16 |