FFCP PHASE1:Mm9::chr12:114665034..114665093,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114665034..114665093,- | |||
|description=CAGE_peak_at_chr12:114665034..114665093,- | |description=CAGE_peak_at_chr12:114665034..114665093,- | ||
|id=chr12:114665034..114665093,- | |id=chr12:114665034..114665093,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.20e-07,32;CL:0002032,3.20e-07,32;CL:0000037,3.20e-07,32;CL:0000837,3.20e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.63e-09!48;UBERON:0004177!7.22e-09!29;UBERON:0002390!7.91e-08!45;UBERON:0003061!7.91e-08!45;UBERON:0000077!5.17e-07!97;UBERON:0002405!8.50e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!4.63e-09!48;UBERON:0004177!7.22e-09!29;UBERON:0002390!7.91e-08!45;UBERON:0003061!7.91e-08!45;UBERON:0000077!5.17e-07!97;UBERON:0002405!8.50e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.37e-13,48;UBERON:0002405,6.37e-13,48;UBERON:0002390,2.65e-11,45;UBERON:0003061,2.65e-11,45;UBERON:0004177,1.39e-10,29;UBERON:0005057,1.39e-10,29;UBERON:0000077,3.27e-10,35;UBERON:0003408,1.12e-07,24;UBERON:0006562,1.65e-07,24;UBERON:0001557,1.65e-07,24;UBERON:0001042,1.65e-07,24;UBERON:0008814,1.65e-07,24;UBERON:0009145,1.65e-07,24;UBERON:0002370,3.52e-07,23;UBERON:0000974,3.52e-07,23;UBERON:0004807,3.52e-07,23;UBERON:0005058,3.52e-07,23;UBERON:0003351,3.52e-07,23;UBERON:0009113,3.52e-07,23;UBERON:0003295,3.52e-07,23;UBERON:0009722,3.52e-07,23;UBERON:0005562,3.52e-07,23;UBERON:0007690,3.52e-07,23 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.29123323441576,20.5551534341433,0.70219357896598,7.70480857014772,0.638177271962691,31.1585328474794,0.34968160967599,11.9919514253639,11.9460407759997,2.09868563438444,110.254026792704,115.176124228821,85.7267096632021,0.680346321208558,154.596011019778,130.599894569468,5.43974237497583,4.5881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3440060335714,1.57057123192139,2.94115744015507,2.73218193983378,1.45653105909346,0,0,0,0,0,0,0,0,0,129.360389270515,26.8383992544197,56.7998520550764,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.856952953211411,0.883474163806454,0.489963196859816,0,0,2.20231761998777,1.0214987046815,0.307213066512487,0.263772575460388,0.731901148819277,0,0.279182999001381,0,1.06958773443767,0.883885756421003,0,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.59857431606684,201.971549244794,1.33597925158342,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0.376999773989026,0,11.1341504828332,12.3845477272982,1.94120219936891,9.27534377533653,9.69750506270444,1.86391761218122,0.878342391034642,0.209446706813455,4.59822699375465,31.511377745057,20.9965955847693,27.8283797290012,1.19832511523858,2.28750301409313,0.376963056338593,1.73824320192276,1.79000820131231,1.0389402227978,0.973447578406546,0.611036183101898,10.9478134136882,1.0108910337347,0.210441855886474,1.17108398666433,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.384341160854549,0.0937017245597288,1.81092359517311,0.431135985865684,0.378212160335639,0.527853372491847,1.09597866213787,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,14.0442637462647,7.72043721344146,13.0715209721973,0,0.234526059981096,0,0.946978942340841,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0.656669856316381,0.405344047729279,0.877199924551994,3.29325172936576,3.48936688776967,1.26173969138476,0.823236899034275,3.96502539580558,0.264450566663544,1.06644125267617,0.232236671860439,0.902072229254653,0.403367049246685,1.11189021922435,1.33157938278791,2.84717436926707,0.658795818896044,1.75934646160189,2.58643413653496,2.9244613067868,2.69645822596266,3.8904848977445,3.58454291857861,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.210407459670956,0.569128834118316,0.738050739898011,1.255989822731,1.48076596706161,0,0.667380422864376,0.589676985339609,1.57403478669398,1.42002084971952,2.894125917029,2.80088436959562,2.30156909960649,3.56697498905078,1.64736847912849,1.43768206527355,4.09355042435354,1.87222603868736,1.01031551178845,0.717589654087649,0,12.9327233116623,0.37898282354097,0.651859905768103,0.339490171550376,0.234690248288502,1.00503754465089,0.476087281772027,0.195133647857799,1.89162172927429,1.99318220683897,2.39182152986231,6.882259218061,10.3610989119537,3.32692834737477,0,0,7.86822836830458,8.00216564283724,0.963303539926752,1.17211686592203,0,3.7870639080656,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,1.24645922567079,0.162886959353576,8.57844639457184,5.30980553359851,1.45668381692989,0.604647113929502,0.377210159511796,0.885905678642318,1.22974059177571,0.516856586336442,2.90826983582004,1.78248689192361,4.42451461110142,3.16255825724996,6.18813259489121,1.36175842301515,0.720244376125241,1.16422815404479,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0,3.28540391289194,0.21183207086382,1.10264199027481,5.7710188529518,0.484393280087717,0.904693873922338,0.954978752025092,1.47726809770555,4.37221254944776,1.48340241608408,38.6168190603147,3.30218988741156,5.55583582109135,14.1276342753518,23.6481013957374,29.2836061704349,13.2583175395207,15.3946597556024,15.4783970660955,0.954670618015114,0.949007980743406,1.01659733563424,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,1.57041565878138,0,4.66613903850454,9.32008969630389,0,0,0.496375471371293,1.36115831840833,2.0665571756437,0.337912250981556,0.234714477291508,0,0.209718688851422,0.241584120826006,1.72818003754719,20.5407228408316,2.63542779877213,4.00572732942826,25.7243229496034,23.9895772194425,23.4443998641893,16.4667765842357,17.8704327881238,17.3662293910814,21.414112670055,20.4677155827786,21.7331074049648,20.1082749028289,27.3491951104871,3.17422537061296,0,0,0,4.82973985080476,7.88266396894964,2.56412273974171,1.71494703263253,1.00314420807073,1.6942555278512,1.84130094602871,2.29158205375759,1.3748254587495,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0.419226325255965,1.10306105070008,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0.50695859978048,0.377252682772152,0.842773567228942,0.512201219238954,0.631790158511746,0.476293691283074,0.695305955669133,0.964546102318525,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.761531471025089,0.182927972872773,0.789209134313529,0.543216455383447,0,0.355905054372522,0.0985044823755635,1.22769312950907,0.309873682371932,0.578719832943424,0.749431733813838,2.10538447600868,1.71896843238639,1.3390183244819,3.30887128679273,4.40548887678801 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,1.29123323441576,20.5551534341433,0.70219357896598,7.70480857014772,0.638177271962691,31.1585328474794,0.34968160967599,11.9919514253639,11.9460407759997,2.09868563438444,110.254026792704,115.176124228821,85.7267096632021,0.680346321208558,154.596011019778,130.599894569468,5.43974237497583,4.5881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3440060335714,1.57057123192139,2.94115744015507,2.73218193983378,1.45653105909346,0,0,0,0,0,0,0,0,0,129.360389270515,26.8383992544197,56.7998520550764,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.856952953211411,0.883474163806454,0.489963196859816,0,0,2.20231761998777,1.0214987046815,0.307213066512487,0.263772575460388,0.731901148819277,0,0.279182999001381,0,1.06958773443767,0.883885756421003,0,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.59857431606684,201.971549244794,1.33597925158342,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0.376999773989026,0,11.1341504828332,12.3845477272982,1.94120219936891,9.27534377533653,9.69750506270444,1.86391761218122,0.878342391034642,0.209446706813455,4.59822699375465,31.511377745057,20.9965955847693,27.8283797290012,1.19832511523858,2.28750301409313,0.376963056338593,1.73824320192276,1.79000820131231,1.0389402227978,0.973447578406546,0.611036183101898,10.9478134136882,1.0108910337347,0.210441855886474,1.17108398666433,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.384341160854549,0.0937017245597288,1.81092359517311,0.431135985865684,0.378212160335639,0.527853372491847,1.09597866213787,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,14.0442637462647,7.72043721344146,13.0715209721973,0,0.234526059981096,0,0.946978942340841,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0.656669856316381,0.405344047729279,0.877199924551994,3.29325172936576,3.48936688776967,1.26173969138476,0.823236899034275,3.96502539580558,0.264450566663544,1.06644125267617,0.232236671860439,0.902072229254653,0.403367049246685,1.11189021922435,1.33157938278791,2.84717436926707,0.658795818896044,1.75934646160189,2.58643413653496,2.9244613067868,2.69645822596266,3.8904848977445,3.58454291857861,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.210407459670956,0.569128834118316,0.738050739898011,1.255989822731,1.48076596706161,0,0.667380422864376,0.589676985339609,1.57403478669398,1.42002084971952,2.894125917029,2.80088436959562,2.30156909960649,3.56697498905078,1.64736847912849,1.43768206527355,4.09355042435354,1.87222603868736,1.01031551178845,0.717589654087649,0,12.9327233116623,0.37898282354097,0.651859905768103,0.339490171550376,0.234690248288502,1.00503754465089,0.476087281772027,0.195133647857799,1.89162172927429,1.99318220683897,2.39182152986231,6.882259218061,10.3610989119537,3.32692834737477,0,0,7.86822836830458,8.00216564283724,0.963303539926752,1.17211686592203,0,3.7870639080656,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,1.24645922567079,0.162886959353576,8.57844639457184,5.30980553359851,1.45668381692989,0.604647113929502,0.377210159511796,0.885905678642318,1.22974059177571,0.516856586336442,2.90826983582004,1.78248689192361,4.42451461110142,3.16255825724996,6.18813259489121,1.36175842301515,0.720244376125241,1.16422815404479,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0,3.28540391289194,0.21183207086382,1.10264199027481,5.7710188529518,0.484393280087717,0.904693873922338,0.954978752025092,1.47726809770555,4.37221254944776,1.48340241608408,38.6168190603147,3.30218988741156,5.55583582109135,14.1276342753518,23.6481013957374,29.2836061704349,13.2583175395207,15.3946597556024,15.4783970660955,0.954670618015114,0.949007980743406,1.01659733563424,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,1.57041565878138,0,4.66613903850454,9.32008969630389,0,0,0.496375471371293,1.36115831840833,2.0665571756437,0.337912250981556,0.234714477291508,0,0.209718688851422,0.241584120826006,1.72818003754719,20.5407228408316,2.63542779877213,4.00572732942826,25.7243229496034,23.9895772194425,23.4443998641893,16.4667765842357,17.8704327881238,17.3662293910814,21.414112670055,20.4677155827786,21.7331074049648,20.1082749028289,27.3491951104871,3.17422537061296,0,0,0,4.82973985080476,7.88266396894964,2.56412273974171,1.71494703263253,1.00314420807073,1.6942555278512,1.84130094602871,2.29158205375759,1.3748254587495,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0.419226325255965,1.10306105070008,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0.50695859978048,0.377252682772152,0.842773567228942,0.512201219238954,0.631790158511746,0.476293691283074,0.695305955669133,0.964546102318525,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.761531471025089,0.182927972872773,0.789209134313529,0.543216455383447,0,0.355905054372522,0.0985044823755635,1.22769312950907,0.309873682371932,0.578719832943424,0.749431733813838,2.10538447600868,1.71896843238639,1.3390183244819,3.30887128679273,4.40548887678801 | ||
|short_description=p@chr12:114665034..114665093,- | |short_description=p@chr12:114665034..114665093,- | ||
}} | }} |
Latest revision as of 19:54, 4 August 2015
Short description: | p@chr12:114665034..114665093, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114665034..114665093, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.20e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.20e-07 | 32 |
hematopoietic stem cell | 3.20e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.20e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.37e-13 | 48 |
immune system | 6.37e-13 | 48 |
hematopoietic system | 2.65e-11 | 45 |
blood island | 2.65e-11 | 45 |
hemopoietic organ | 1.39e-10 | 29 |
immune organ | 1.39e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 3.27e-10 | 35 |
gland of gut | 1.12e-07 | 24 |
pharynx | 1.65e-07 | 24 |
upper respiratory tract | 1.65e-07 | 24 |
chordate pharynx | 1.65e-07 | 24 |
pharyngeal arch system | 1.65e-07 | 24 |
pharyngeal region of foregut | 1.65e-07 | 24 |
thymus | 3.52e-07 | 23 |
neck | 3.52e-07 | 23 |
respiratory system epithelium | 3.52e-07 | 23 |
hemolymphoid system gland | 3.52e-07 | 23 |
pharyngeal epithelium | 3.52e-07 | 23 |
thymic region | 3.52e-07 | 23 |
pharyngeal gland | 3.52e-07 | 23 |
entire pharyngeal arch endoderm | 3.52e-07 | 23 |
thymus primordium | 3.52e-07 | 23 |
early pharyngeal endoderm | 3.52e-07 | 23 |