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FFCP PHASE1:Mm9::chr5:93327079..93327101,+: Difference between revisions

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{{FFCP|EntrezGene=27428|HGNC=|MCL_coexpression_id=2433|UniProt=Q9QXN0|association_with_transcript=55bp_to_NM_001077596,uc008ydv.1_5end|description=CAGE_peak_5_at_Shroom3_5end|id=chr5:93327079..93327101,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.61e-07,9;CL:0002251,1.61e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.10e-16!59;UBERON:0000160!1.23e-14!43;UBERON:0000344!1.88e-07!15;UBERON:0000468!3.09e-07!333;UBERON:0000922!5.23e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.75e-24,47;UBERON:0000160,3.26e-22,31;UBERON:0000344,4.24e-09,15;UBERON:0001242,4.33e-08,13;UBERON:0001262,4.33e-08,13;UBERON:0004786,4.33e-08,13;UBERON:0003350,1.61e-07,9;UBERON:0004808,1.61e-07,9;UBERON:0001277,1.61e-07,9;UBERON:0004923,2.74e-07,24;UBERON:0001007,7.17e-07,116;UBERON:0001555,7.17e-07,116;UBERON:0007026,7.17e-07,116;UBERON:0004119,8.25e-07,118;UBERON:0000925,8.25e-07,118;UBERON:0006595,8.25e-07,118|phase1_expression=0,3.48975407639361,4.54999239389536,11.1911758183527,13.5241847085514,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.23989391910769,3.44113921600755,2.29692785646008,0.86152399231815,1.72376986148711,1.90023419456374,1.76421090831952,0.443461021310609,0,0,0,8.95440021228951,8.14549762256613,9.59595974433135,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0.219686182734472,1.74986909166855,0.279972843250725,1.43752564364972,0,0,0,1.54355661621568,0.573066879877513,3.6097046459421,0,0,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.731901148819277,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0,4.16494063332512,3.92972112555285,1.15945795480671,0,1.3599426674155,0,0,0,0.140444420131752,0,0.259786004602869,0,0.704217098883403,0,0,0,0.865964164044856,0.253359865475099,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.301445281105245,0.470354828542819,0.251333182659351,13.1013332899218,0.433798070759735,0,0.161766849947409,0.220841518460394,0,7.45567044872489,0,0.209446706813455,12.0064815948038,0,0,0,0.149790639404823,0,0.125654352112864,0,0,1.24672826735736,0.162241263067758,0.916554274652847,0,0.505445516867349,0.420883711772948,1.04096354370163,0.459804208866946,0.720248519221397,0.452114453507145,1.49680298132921,3.07472928683639,3.09215691047105,5.17406741478031,0.646703978798527,1.51284864134255,1.23165786914764,0,0.556094498451196,0,0,1.39323986772945,0,0,0,5.59239585845855,3.51789089971644,3.42117916775928,6.15536312521547,5.3126342571799,5.86215028972037,4.41814495025775,4.02410102099429,3.61972561338225,1.97471819896177,1.47750717671186,1.62137619091711,0.584799949701329,0.658650345873152,0,0.210289948564127,0.308713837137853,26.7639214216876,2.3800550999719,1.70630600428187,3.71578674976702,4.51036114627327,8.0673409849337,7.11609740303585,8.3699275489526,17.0830462156024,6.25856027951241,6.03204501120647,8.55512829776949,5.26403035221624,8.08937467788799,11.8875927431082,14.5373129475688,3.22435431620239,3.31320686568214,5.63538678365402,1.22190796707189,2.71533482034676,1.8936671370386,0.569128834118316,0.295220295959204,0.31399745568275,0,0,0.333690211432188,0,0.674586337154561,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.324270453550071,1.09824565275233,0,0.372140947668503,0,0,0,0,1.47802552133284,0.189491411770485,0.977789858652155,1.01847051465113,1.17345124144251,1.67506257441816,1.42826184531608,1.36593553500459,0.945810864637146,0.664394068946325,0.478364305972461,1.63863314715738,0.863424909329478,1.15719246865209,0,0,3.93411418415229,1.93155722413313,0,0.468846746368813,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,0,0.321321316421807,0.567760340833074,0,0.162886959353576,0.989820737835213,1.32745138339963,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,0,2.32585463851399,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,1.44048875225048,0.776152102696527,1.50035924522115,1.24138163549592,1.07021290561242,1.31639216481697,2.13125464380219,0.469343416127421,1.0591603543191,5.07215315526412,0.32977250588296,1.13025098687134,0.301564624640779,0.596861720015682,0.164140899745061,9.61886760878507,0.370850604021019,0,2.27025554759545,2.59272338317596,0.376736914009382,0,0,0,0,0,0.954670618015114,2.84702394223022,1.62655573701479,2.16010681643603,2.92723614420256,4.36725127492355,3.50647300600534,4.46328660916814,3.92633912976044,10.628427809927,3.10669656543463,0,1.64468200648377,0.496375471371293,0.583353565032143,0.645799117388655,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.810900861160657,0.924398614483445,0.51968329191118,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0.443971906748129,0.538283139656854,0.167884616364078,0.965947970160952,0,0.915758121336325,0,2.50786052017682,0.564751842617067,0,0,0,0,0,0,0,0,0,1.3492355185943,2.39414924040619,1.53660245178721,0.729320151204882,0.209613162627982,1.47074806760011,0.888986911206461,1.44224540067226,2.56735367673452,0.758091635291392,1.52087579934144,0.943131706930381,1.40462261204824,1.47257850531199,0.976402972245426,2.38146845641537,1.15884325944855,0.964546102318525,1.64834360321323,1.61918812147837,1.02860775715625,1.24233064311536,2.14592570952589,0.872078499793971,1.12931256498397,1.18460451048347,1.09756783723664,0.789209134313529,0.543216455383447,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.929621047115796,1.15743966588685,1.49886346762768,1.87145286756327,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p5@Shroom3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27428
|HGNC=
|MCL_coexpression_id=2433
|TSSclassifier=NA
|UniProt=uniprot:Q9QXN0
|association_with_transcript=55bp_to_NM_001077596,uc008ydv.1_5end
|cluster_id=chr5:93327079..93327101,+
|description=CAGE_peak_5_at_Shroom3_5end
|id=chr5:93327079..93327101,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,1.61e-07,9;CL:0002251,1.61e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.10e-16!59;UBERON:0000160!1.23e-14!43;UBERON:0000344!1.88e-07!15;UBERON:0000468!3.09e-07!333;UBERON:0000922!5.23e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.75e-24,47;UBERON:0000160,3.26e-22,31;UBERON:0000344,4.24e-09,15;UBERON:0001242,4.33e-08,13;UBERON:0001262,4.33e-08,13;UBERON:0004786,4.33e-08,13;UBERON:0003350,1.61e-07,9;UBERON:0004808,1.61e-07,9;UBERON:0001277,1.61e-07,9;UBERON:0004923,2.74e-07,24;UBERON:0001007,7.17e-07,116;UBERON:0001555,7.17e-07,116;UBERON:0007026,7.17e-07,116;UBERON:0004119,8.25e-07,118;UBERON:0000925,8.25e-07,118;UBERON:0006595,8.25e-07,118
|phase1_expression=0,3.48975407639361,4.54999239389536,11.1911758183527,13.5241847085514,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.23989391910769,3.44113921600755,2.29692785646008,0.86152399231815,1.72376986148711,1.90023419456374,1.76421090831952,0.443461021310609,0,0,0,8.95440021228951,8.14549762256613,9.59595974433135,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0.219686182734472,1.74986909166855,0.279972843250725,1.43752564364972,0,0,0,1.54355661621568,0.573066879877513,3.6097046459421,0,0,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.731901148819277,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0,4.16494063332512,3.92972112555285,1.15945795480671,0,1.3599426674155,0,0,0,0.140444420131752,0,0.259786004602869,0,0.704217098883403,0,0,0,0.865964164044856,0.253359865475099,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.301445281105245,0.470354828542819,0.251333182659351,13.1013332899218,0.433798070759735,0,0.161766849947409,0.220841518460394,0,7.45567044872489,0,0.209446706813455,12.0064815948038,0,0,0,0.149790639404823,0,0.125654352112864,0,0,1.24672826735736,0.162241263067758,0.916554274652847,0,0.505445516867349,0.420883711772948,1.04096354370163,0.459804208866946,0.720248519221397,0.452114453507145,1.49680298132921,3.07472928683639,3.09215691047105,5.17406741478031,0.646703978798527,1.51284864134255,1.23165786914764,0,0.556094498451196,0,0,1.39323986772945,0,0,0,5.59239585845855,3.51789089971644,3.42117916775928,6.15536312521547,5.3126342571799,5.86215028972037,4.41814495025775,4.02410102099429,3.61972561338225,1.97471819896177,1.47750717671186,1.62137619091711,0.584799949701329,0.658650345873152,0,0.210289948564127,0.308713837137853,26.7639214216876,2.3800550999719,1.70630600428187,3.71578674976702,4.51036114627327,8.0673409849337,7.11609740303585,8.3699275489526,17.0830462156024,6.25856027951241,6.03204501120647,8.55512829776949,5.26403035221624,8.08937467788799,11.8875927431082,14.5373129475688,3.22435431620239,3.31320686568214,5.63538678365402,1.22190796707189,2.71533482034676,1.8936671370386,0.569128834118316,0.295220295959204,0.31399745568275,0,0,0.333690211432188,0,0.674586337154561,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.324270453550071,1.09824565275233,0,0.372140947668503,0,0,0,0,1.47802552133284,0.189491411770485,0.977789858652155,1.01847051465113,1.17345124144251,1.67506257441816,1.42826184531608,1.36593553500459,0.945810864637146,0.664394068946325,0.478364305972461,1.63863314715738,0.863424909329478,1.15719246865209,0,0,3.93411418415229,1.93155722413313,0,0.468846746368813,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,0,0.321321316421807,0.567760340833074,0,0.162886959353576,0.989820737835213,1.32745138339963,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,0,2.32585463851399,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,1.44048875225048,0.776152102696527,1.50035924522115,1.24138163549592,1.07021290561242,1.31639216481697,2.13125464380219,0.469343416127421,1.0591603543191,5.07215315526412,0.32977250588296,1.13025098687134,0.301564624640779,0.596861720015682,0.164140899745061,9.61886760878507,0.370850604021019,0,2.27025554759545,2.59272338317596,0.376736914009382,0,0,0,0,0,0.954670618015114,2.84702394223022,1.62655573701479,2.16010681643603,2.92723614420256,4.36725127492355,3.50647300600534,4.46328660916814,3.92633912976044,10.628427809927,3.10669656543463,0,1.64468200648377,0.496375471371293,0.583353565032143,0.645799117388655,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.810900861160657,0.924398614483445,0.51968329191118,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0.443971906748129,0.538283139656854,0.167884616364078,0.965947970160952,0,0.915758121336325,0,2.50786052017682,0.564751842617067,0,0,0,0,0,0,0,0,0,1.3492355185943,2.39414924040619,1.53660245178721,0.729320151204882,0.209613162627982,1.47074806760011,0.888986911206461,1.44224540067226,2.56735367673452,0.758091635291392,1.52087579934144,0.943131706930381,1.40462261204824,1.47257850531199,0.976402972245426,2.38146845641537,1.15884325944855,0.964546102318525,1.64834360321323,1.61918812147837,1.02860775715625,1.24233064311536,2.14592570952589,0.872078499793971,1.12931256498397,1.18460451048347,1.09756783723664,0.789209134313529,0.543216455383447,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.929621047115796,1.15743966588685,1.49886346762768,1.87145286756327,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p5@Shroom3
}}

Revision as of 19:46, 4 August 2015

Short description:p5@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Shroom3_5end
Coexpression cluster:MCL_coexpression_mm9:2433
Association with transcript: 55bp_to_NM_001077596, uc008ydv.1_5end
EntrezGene:27428
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p5@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I326.76
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E311.89
intestine, neonate N30.CNhs11131.1384-42G114.54
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.61e-079
epithelial cell of alimentary canal1.61e-079

Uber anatomy
Ontology termp-valuen
gastrointestinal system4.75e-2447
intestine3.26e-2231
mucosa4.24e-0915
intestinal mucosa4.33e-0813
wall of intestine4.33e-0813
gastrointestinal system mucosa4.33e-0813
epithelium of mucosa1.61e-079
gastrointestinal system epithelium1.61e-079
intestinal epithelium1.61e-079
organ component layer2.74e-0724
digestive system7.17e-07116
digestive tract7.17e-07116
primitive gut7.17e-07116
endoderm-derived structure8.25e-07118
endoderm8.25e-07118
presumptive endoderm8.25e-07118
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