FFCP PHASE1:Mm9::chr1:135060428..135060498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135060428..135060498,+ | |||
|description=CAGE_peak_at_chr1:135060428..135060498,+ | |description=CAGE_peak_at_chr1:135060428..135060498,+ | ||
|id=chr1:135060428..135060498,+ | |id=chr1:135060428..135060498,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.64e-08!9;CL:0002251!5.64e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.23e-11,9;CL:0002251,9.23e-11,9;CL:0002076,9.49e-09,15;CL:0000239,1.08e-07,6;CL:0000677,1.08e-07,6;CL:0000584,1.08e-07,6;CL:0000066,1.91e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.86e-15!59;UBERON:0000160!4.16e-12!43;UBERON:0000344!1.13e-11!15;UBERON:0001242!1.59e-10!13;UBERON:0000060!1.59e-10!13;UBERON:0001262!1.59e-10!13;UBERON:0004786!1.59e-10!13;UBERON:0004923!5.16e-10!24;UBERON:0003350!5.64e-08!9;UBERON:0004808!5.64e-08!9;UBERON:0001277!5.64e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.63e-28,31;UBERON:0005409,1.25e-27,47;UBERON:0000344,4.67e-16,15;UBERON:0001242,2.07e-14,13;UBERON:0001262,2.07e-14,13;UBERON:0004786,2.07e-14,13;UBERON:0004923,1.61e-11,24;UBERON:0003350,9.23e-11,9;UBERON:0004808,9.23e-11,9;UBERON:0001277,9.23e-11,9;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0001007,1.22e-09,116;UBERON:0001555,1.22e-09,116;UBERON:0007026,1.22e-09,116;UBERON:0004921,1.20e-08,114;UBERON:0000485,3.35e-08,11 | |||
|phase1_expression=0,34.8975407639361,47.3199208965117,71.0790896571051,80.6442125213619,53.7213670118047,53.0300694151843,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0,0.680346321208558,3.27660138962921,2.87319768052829,23.8388709962176,23.1703373877842,31.5827580263261,30.1533397311352,28.2267314818515,33.0640749854091,36.7963989449499,18.4036323843903,0,0,0,51.4155883157269,41.7248959849816,64.5175165789086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,1.0214987046815,0.768032666281217,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0,1.73918693221007,0,0.679971333707751,0,0,0,1.82577746171277,0,0,0,0,0,0,0,3.24736561516821,2.53359865475099,2.02209778005913,5.25245846707676,0.258937883647172,0,0,0,0.461230994512117,0,0.352766121407114,0.125666591329675,9.88779870937496,0,0.884610551949874,0,0.441683036920787,0,31.6865994070808,0,0.41889341362691,35.2530736187856,0.958520996047362,1.79970819298022,0.508280908292259,1.19832511523858,0.457500602818626,0,0.347648640384553,0.255715457330331,1.0389402227978,0.324482526135515,0.101839363850316,0.622034853050465,5.05445516867349,16.2040229032585,0.260240885925407,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,7.50239775143145,0,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,0.630869845692382,0,41.3023478729747,34.3785736662608,0.213288250535234,2.78684006232526,13.788818361464,17.5464666422308,16.6783532883653,14.6473732106671,33.2170343081158,18.1168850196412,23.3741744184251,24.6706025331027,23.3956904542944,55.7268033365617,32.8529835809535,34.0531577264968,0,0.342745537829186,0,0.610953983535943,1.74557238450863,0.420814919341911,1.51767689098217,2.65698266363284,2.82597710114475,2.59134044235781,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.936113019343682,0.757736633841335,1.4351793081753,0.482443521363367,0.369506380333209,0.189491411770485,0,0.509235257325564,0,0,0,0,0.630540576424764,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,6.20227903603731,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,2.3467170806371,7.41412248023371,7.71849393192367,1.48397627647332,1.13025098687134,0.844380948994182,0.954978752025092,0.820704498725306,35.5606620688418,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,2.20971958992012,2.51912614182584,1.93479963326193,12.4107180341965,0.632671987162271,3.86306987541013,10.0444966964275,8.99079672862215,14.4119292072477,14.7002137559455,16.3653842336165,18.5846718808661,36.0329625751184,1.86401793926078,0,0,0,0.194451188344048,0.387479470433193,0,0,0,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,2.72076460338254,1.55390167361845,1.25599399253266,2.68615386182526,6.56844619709447,0.187682475451182,2.38097111547445,3.21552568618599,7.52358156053045,0,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0,1.03552062350364,0.103787347584177,0,0,1.21553358534147,0.419226325255965,0.919217542250071,1.33348036680969,1.64828045791115,0.64183841918363,2.27427490587418,2.02783439912192,0.943131706930381,0.842773567228942,1.08842759088278,1.66562859971278,1.42888107384922,2.31768651889711,1.15745532278223,0,0.883193520806384,2.40008476669791,0.70990322463735,2.38436189947321,1.88950341622027,1.41164070622996,0.846146078916765,2.19513567447327,1.57841826862706,1.7654534799962,1.68342681497322,1.77952527186261,1.18205378850676,1.22769312950907,1.39443157067369,0.964533054905707,0.499621155875892,0.701794825336225,2.14871054048298,0,0.220591419119515,0 | |phase1_expression=0,34.8975407639361,47.3199208965117,71.0790896571051,80.6442125213619,53.7213670118047,53.0300694151843,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0,0.680346321208558,3.27660138962921,2.87319768052829,23.8388709962176,23.1703373877842,31.5827580263261,30.1533397311352,28.2267314818515,33.0640749854091,36.7963989449499,18.4036323843903,0,0,0,51.4155883157269,41.7248959849816,64.5175165789086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,1.0214987046815,0.768032666281217,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0,1.73918693221007,0,0.679971333707751,0,0,0,1.82577746171277,0,0,0,0,0,0,0,3.24736561516821,2.53359865475099,2.02209778005913,5.25245846707676,0.258937883647172,0,0,0,0.461230994512117,0,0.352766121407114,0.125666591329675,9.88779870937496,0,0.884610551949874,0,0.441683036920787,0,31.6865994070808,0,0.41889341362691,35.2530736187856,0.958520996047362,1.79970819298022,0.508280908292259,1.19832511523858,0.457500602818626,0,0.347648640384553,0.255715457330331,1.0389402227978,0.324482526135515,0.101839363850316,0.622034853050465,5.05445516867349,16.2040229032585,0.260240885925407,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,7.50239775143145,0,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,0.630869845692382,0,41.3023478729747,34.3785736662608,0.213288250535234,2.78684006232526,13.788818361464,17.5464666422308,16.6783532883653,14.6473732106671,33.2170343081158,18.1168850196412,23.3741744184251,24.6706025331027,23.3956904542944,55.7268033365617,32.8529835809535,34.0531577264968,0,0.342745537829186,0,0.610953983535943,1.74557238450863,0.420814919341911,1.51767689098217,2.65698266363284,2.82597710114475,2.59134044235781,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.936113019343682,0.757736633841335,1.4351793081753,0.482443521363367,0.369506380333209,0.189491411770485,0,0.509235257325564,0,0,0,0,0.630540576424764,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,6.20227903603731,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,2.3467170806371,7.41412248023371,7.71849393192367,1.48397627647332,1.13025098687134,0.844380948994182,0.954978752025092,0.820704498725306,35.5606620688418,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,2.20971958992012,2.51912614182584,1.93479963326193,12.4107180341965,0.632671987162271,3.86306987541013,10.0444966964275,8.99079672862215,14.4119292072477,14.7002137559455,16.3653842336165,18.5846718808661,36.0329625751184,1.86401793926078,0,0,0,0.194451188344048,0.387479470433193,0,0,0,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,2.72076460338254,1.55390167361845,1.25599399253266,2.68615386182526,6.56844619709447,0.187682475451182,2.38097111547445,3.21552568618599,7.52358156053045,0,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0,1.03552062350364,0.103787347584177,0,0,1.21553358534147,0.419226325255965,0.919217542250071,1.33348036680969,1.64828045791115,0.64183841918363,2.27427490587418,2.02783439912192,0.943131706930381,0.842773567228942,1.08842759088278,1.66562859971278,1.42888107384922,2.31768651889711,1.15745532278223,0,0.883193520806384,2.40008476669791,0.70990322463735,2.38436189947321,1.88950341622027,1.41164070622996,0.846146078916765,2.19513567447327,1.57841826862706,1.7654534799962,1.68342681497322,1.77952527186261,1.18205378850676,1.22769312950907,1.39443157067369,0.964533054905707,0.499621155875892,0.701794825336225,2.14871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr1:135060428..135060498,+ | |short_description=p@chr1:135060428..135060498,+ | ||
}} | }} |
Latest revision as of 19:18, 4 August 2015
Short description: | p@chr1:135060428..135060498, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135060428..135060498, + |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.23e-11 | 9 |
epithelial cell of alimentary canal | 9.23e-11 | 9 |
endo-epithelial cell | 9.49e-09 | 15 |
brush border epithelial cell | 1.08e-07 | 6 |
gut absorptive cell | 1.08e-07 | 6 |
enterocyte | 1.08e-07 | 6 |
epithelial cell | 1.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.63e-28 | 31 |
gastrointestinal system | 1.25e-27 | 47 |
mucosa | 4.67e-16 | 15 |
intestinal mucosa | 2.07e-14 | 13 |
wall of intestine | 2.07e-14 | 13 |
gastrointestinal system mucosa | 2.07e-14 | 13 |
organ component layer | 1.61e-11 | 24 |
epithelium of mucosa | 9.23e-11 | 9 |
gastrointestinal system epithelium | 9.23e-11 | 9 |
intestinal epithelium | 9.23e-11 | 9 |
endoderm-derived structure | 1.80e-10 | 118 |
endoderm | 1.80e-10 | 118 |
presumptive endoderm | 1.80e-10 | 118 |
digestive system | 1.22e-09 | 116 |
digestive tract | 1.22e-09 | 116 |
primitive gut | 1.22e-09 | 116 |
subdivision of digestive tract | 1.20e-08 | 114 |
simple columnar epithelium | 3.35e-08 | 11 |