FFCP PHASE1:Mm9::chr4:128785016..128785038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:128785016..128785038,+ | |||
|description=CAGE_peak_at_chr4:128785016..128785038,+ | |description=CAGE_peak_at_chr4:128785016..128785038,+ | ||
|id=chr4:128785016..128785038,+ | |id=chr4:128785016..128785038,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.42e-10!9;CL:0002251!9.42e-10!9;CL:0000239!2.95e-08!6;CL:0000677!2.95e-08!6;CL:0000212!2.95e-08!6;CL:0000584!2.95e-08!6;CL:0000075!6.68e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.01e-13,6;CL:0000677,1.01e-13,6;CL:0000584,1.01e-13,6;CL:0000075,1.16e-11,7;CL:0002563,6.50e-09,9;CL:0002251,6.50e-09,9;CL:0000682,1.80e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.10e-20!43;UBERON:0000344!1.09e-16!15;UBERON:0005409!3.25e-15!59;UBERON:0001242!2.16e-14!13;UBERON:0000060!2.16e-14!13;UBERON:0001262!2.16e-14!13;UBERON:0004786!2.16e-14!13;UBERON:0003350!9.42e-10!9;UBERON:0004808!9.42e-10!9;UBERON:0001277!9.42e-10!9;UBERON:0004923!9.74e-09!24;UBERON:0000485!1.37e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.93e-41,31;UBERON:0005409,8.02e-30,47;UBERON:0000344,1.60e-20,15;UBERON:0001242,1.43e-16,13;UBERON:0001262,1.43e-16,13;UBERON:0004786,1.43e-16,13;UBERON:0004923,7.88e-12,24;UBERON:0001007,2.32e-10,116;UBERON:0001555,2.32e-10,116;UBERON:0007026,2.32e-10,116;UBERON:0004119,4.47e-10,118;UBERON:0000925,4.47e-10,118;UBERON:0006595,4.47e-10,118;UBERON:0002108,5.82e-10,4;UBERON:0003350,6.50e-09,9;UBERON:0004808,6.50e-09,9;UBERON:0001277,6.50e-09,9;UBERON:0004921,1.10e-08,114;UBERON:0000331,8.61e-08,3;UBERON:0002116,8.61e-08,3;UBERON:0001204,8.61e-08,3;UBERON:0001168,8.61e-08,3;UBERON:0000485,3.65e-07,11 | |||
|phase1_expression=0,3.14077866875425,2.27499619694768,9.67885476181856,9.5170188689806,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,2.98232065387321,2.8711598205751,4.73838195774982,1.50829862880122,6.65081968097309,4.03248207615889,2.66076612786366,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,9.52022039988759,0,0,0.128867461322093,6.85723983719365,9.11749979763968,16.7398550979052,4.2707615539006,20.0932724763293,25.1335208800269,25.4664284212673,21.4460495831032,6.29173586057955,3.6743468478698,1.39398891278057,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.505157755894224,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0,1.52853794622324,0,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,1.55572709461131,0.412070114477788,1.60459604795908,1.01078884705519,1.01391719956096,0.754505365544305,0.655490552289177,0.512201219238954,0.574354689556133,0.952587382566147,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.238436189947321,1.16277133305863,0.941093804153306,1.09998990259179,0.365855945745545,0.789209134313529,0.950628796921032,1.12228454331548,0.830445126869219,0.788035859004508,0.409231043169689,0.619747364743864,0.578719832943424,0,0.935726433781634,0.859484216193193,0,0,0 | |phase1_expression=0,3.14077866875425,2.27499619694768,9.67885476181856,9.5170188689806,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,2.98232065387321,2.8711598205751,4.73838195774982,1.50829862880122,6.65081968097309,4.03248207615889,2.66076612786366,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,9.52022039988759,0,0,0.128867461322093,6.85723983719365,9.11749979763968,16.7398550979052,4.2707615539006,20.0932724763293,25.1335208800269,25.4664284212673,21.4460495831032,6.29173586057955,3.6743468478698,1.39398891278057,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.505157755894224,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0,1.52853794622324,0,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,1.55572709461131,0.412070114477788,1.60459604795908,1.01078884705519,1.01391719956096,0.754505365544305,0.655490552289177,0.512201219238954,0.574354689556133,0.952587382566147,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.238436189947321,1.16277133305863,0.941093804153306,1.09998990259179,0.365855945745545,0.789209134313529,0.950628796921032,1.12228454331548,0.830445126869219,0.788035859004508,0.409231043169689,0.619747364743864,0.578719832943424,0,0.935726433781634,0.859484216193193,0,0,0 | ||
|short_description=p@chr4:128785016..128785038,+ | |short_description=p@chr4:128785016..128785038,+ | ||
}} | }} |
Latest revision as of 19:09, 4 August 2015
Short description: | p@chr4:128785016..128785038, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:128785016..128785038, + |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.01e-13 | 6 |
gut absorptive cell | 1.01e-13 | 6 |
enterocyte | 1.01e-13 | 6 |
columnar/cuboidal epithelial cell | 1.16e-11 | 7 |
intestinal epithelial cell | 6.50e-09 | 9 |
epithelial cell of alimentary canal | 6.50e-09 | 9 |
M cell of gut | 1.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.93e-41 | 31 |
gastrointestinal system | 8.02e-30 | 47 |
mucosa | 1.60e-20 | 15 |
intestinal mucosa | 1.43e-16 | 13 |
wall of intestine | 1.43e-16 | 13 |
gastrointestinal system mucosa | 1.43e-16 | 13 |
organ component layer | 7.88e-12 | 24 |
digestive system | 2.32e-10 | 116 |
digestive tract | 2.32e-10 | 116 |
primitive gut | 2.32e-10 | 116 |
endoderm-derived structure | 4.47e-10 | 118 |
endoderm | 4.47e-10 | 118 |
presumptive endoderm | 4.47e-10 | 118 |
small intestine | 5.82e-10 | 4 |
epithelium of mucosa | 6.50e-09 | 9 |
gastrointestinal system epithelium | 6.50e-09 | 9 |
intestinal epithelium | 6.50e-09 | 9 |
subdivision of digestive tract | 1.10e-08 | 114 |
ileal mucosa | 8.61e-08 | 3 |
ileum | 8.61e-08 | 3 |
mucosa of small intestine | 8.61e-08 | 3 |
wall of small intestine | 8.61e-08 | 3 |
simple columnar epithelium | 3.65e-07 | 11 |