FFCP PHASE1:Mm9::chr1:132748293..132748311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:132748293..132748311,+ | |||
|description=CAGE_peak_at_chr1:132748293..132748311,+ | |description=CAGE_peak_at_chr1:132748293..132748311,+ | ||
|id=chr1:132748293..132748311,+ | |id=chr1:132748293..132748311,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.84e-12!9;CL:0002251!7.84e-12!9;CL:0000066!4.14e-11!25;CL:0000223!1.20e-09!20;CL:0000239!1.20e-08!6;CL:0000677!1.20e-08!6;CL:0000212!1.20e-08!6;CL:0000584!1.20e-08!6;CL:0000075!2.90e-07!7 | |ontology_enrichment_celltype=CL:0002563!7.84e-12!9;CL:0002251!7.84e-12!9;CL:0000066!4.14e-11!25;CL:0000223!1.20e-09!20;CL:0000239!1.20e-08!6;CL:0000677!1.20e-08!6;CL:0000212!1.20e-08!6;CL:0000584!1.20e-08!6;CL:0000075!2.90e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-16,25;CL:0002563,3.18e-16,9;CL:0002251,3.18e-16,9;CL:0000223,4.22e-14,20;CL:0000239,1.11e-11,6;CL:0000677,1.11e-11,6;CL:0000584,1.11e-11,6;CL:0000075,6.59e-10,7;CL:0002076,4.70e-09,15;CL:0000182,7.36e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.80e-20!15;UBERON:0001242!2.43e-17!13;UBERON:0000060!2.43e-17!13;UBERON:0001262!2.43e-17!13;UBERON:0004786!2.43e-17!13;UBERON:0001007!1.08e-16!128;UBERON:0001555!1.08e-16!128;UBERON:0007026!1.08e-16!128;UBERON:0004119!3.19e-16!130;UBERON:0000925!3.19e-16!130;UBERON:0006595!3.19e-16!130;UBERON:0000160!4.65e-16!43;UBERON:0004921!5.98e-15!126;UBERON:0004185!5.98e-15!126;UBERON:0005409!9.31e-15!59;UBERON:0003350!7.84e-12!9;UBERON:0004808!7.84e-12!9;UBERON:0001277!7.84e-12!9;UBERON:0004923!6.67e-11!24;UBERON:0000485!2.74e-09!11;UBERON:0003929!2.46e-07!55;UBERON:0002365!6.87e-07!25;UBERON:0002330!6.87e-07!25 | |ontology_enrichment_uberon=UBERON:0000344!3.80e-20!15;UBERON:0001242!2.43e-17!13;UBERON:0000060!2.43e-17!13;UBERON:0001262!2.43e-17!13;UBERON:0004786!2.43e-17!13;UBERON:0001007!1.08e-16!128;UBERON:0001555!1.08e-16!128;UBERON:0007026!1.08e-16!128;UBERON:0004119!3.19e-16!130;UBERON:0000925!3.19e-16!130;UBERON:0006595!3.19e-16!130;UBERON:0000160!4.65e-16!43;UBERON:0004921!5.98e-15!126;UBERON:0004185!5.98e-15!126;UBERON:0005409!9.31e-15!59;UBERON:0003350!7.84e-12!9;UBERON:0004808!7.84e-12!9;UBERON:0001277!7.84e-12!9;UBERON:0004923!6.67e-11!24;UBERON:0000485!2.74e-09!11;UBERON:0003929!2.46e-07!55;UBERON:0002365!6.87e-07!25;UBERON:0002330!6.87e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.27e-34,31;UBERON:0000344,4.05e-28,15;UBERON:0001242,4.22e-24,13;UBERON:0001262,4.22e-24,13;UBERON:0004786,4.22e-24,13;UBERON:0005409,1.44e-22,47;UBERON:0001007,4.58e-18,116;UBERON:0001555,4.58e-18,116;UBERON:0007026,4.58e-18,116;UBERON:0004119,1.31e-17,118;UBERON:0000925,1.31e-17,118;UBERON:0006595,1.31e-17,118;UBERON:0003350,3.18e-16,9;UBERON:0004808,3.18e-16,9;UBERON:0001277,3.18e-16,9;UBERON:0004923,3.66e-16,24;UBERON:0004921,7.65e-16,114;UBERON:0000485,5.82e-13,11;UBERON:0002108,3.34e-09,4;UBERON:0002365,5.94e-09,25;UBERON:0002330,5.94e-09,25;UBERON:0003929,1.98e-07,55;UBERON:0000331,3.34e-07,3;UBERON:0002116,3.34e-07,3;UBERON:0001204,3.34e-07,3;UBERON:0001168,3.34e-07,3 | |||
|phase1_expression=0,2.09385244583617,3.18499467572675,14.5182821427278,8.01433167914156,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,13.1193786690593,7.79991555628378,1.14846392823004,1.29228598847722,3.01659725760245,21.0925995596575,9.8291750606373,2.21730510655305,0,0,0,2.59966457776147,2.1610503896604,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,11.873470216032,7.14754059192436,4.03224198387602,1.82577746171277,0,0,0,0,0,0,0,0,0,0,7.76450382089608,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,23.5020490791904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.379200775549,6.87571473325215,0,0,0,0,0,0.190225626112559,18.9811624617805,1.15289268306808,5.52937459360593,3.18330355265841,2.33956904542944,23.3693046250098,43.2276099749388,28.0789195288658,0,0,0,0,0,0,0,0.295220295959204,0.470996183524124,0,2.07516838961004,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.757736633841335,1.25578189465339,4.3419916922703,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,1.20879487306127,0,0,0,4.91764273019036,1.65562047782839,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.26175594198403,12.3134224627203,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,3.18499467572675,14.5182821427278,8.01433167914156,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,13.1193786690593,7.79991555628378,1.14846392823004,1.29228598847722,3.01659725760245,21.0925995596575,9.8291750606373,2.21730510655305,0,0,0,2.59966457776147,2.1610503896604,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,11.873470216032,7.14754059192436,4.03224198387602,1.82577746171277,0,0,0,0,0,0,0,0,0,0,7.76450382089608,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,23.5020490791904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.379200775549,6.87571473325215,0,0,0,0,0,0.190225626112559,18.9811624617805,1.15289268306808,5.52937459360593,3.18330355265841,2.33956904542944,23.3693046250098,43.2276099749388,28.0789195288658,0,0,0,0,0,0,0,0.295220295959204,0.470996183524124,0,2.07516838961004,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.757736633841335,1.25578189465339,4.3419916922703,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,1.20879487306127,0,0,0,4.91764273019036,1.65562047782839,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.26175594198403,12.3134224627203,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:132748293..132748311,+ | |short_description=p@chr1:132748293..132748311,+ | ||
}} | }} |
Latest revision as of 17:56, 4 August 2015
Short description: | p@chr1:132748293..132748311, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132748293..132748311, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-16 | 25 |
intestinal epithelial cell | 3.18e-16 | 9 |
epithelial cell of alimentary canal | 3.18e-16 | 9 |
endodermal cell | 4.22e-14 | 20 |
brush border epithelial cell | 1.11e-11 | 6 |
gut absorptive cell | 1.11e-11 | 6 |
enterocyte | 1.11e-11 | 6 |
columnar/cuboidal epithelial cell | 6.59e-10 | 7 |
endo-epithelial cell | 4.70e-09 | 15 |
hepatocyte | 7.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.27e-34 | 31 |
mucosa | 4.05e-28 | 15 |
intestinal mucosa | 4.22e-24 | 13 |
wall of intestine | 4.22e-24 | 13 |
gastrointestinal system mucosa | 4.22e-24 | 13 |
gastrointestinal system | 1.44e-22 | 47 |
digestive system | 4.58e-18 | 116 |
digestive tract | 4.58e-18 | 116 |
primitive gut | 4.58e-18 | 116 |
endoderm-derived structure | 1.31e-17 | 118 |
endoderm | 1.31e-17 | 118 |
presumptive endoderm | 1.31e-17 | 118 |
epithelium of mucosa | 3.18e-16 | 9 |
gastrointestinal system epithelium | 3.18e-16 | 9 |
intestinal epithelium | 3.18e-16 | 9 |
organ component layer | 3.66e-16 | 24 |
subdivision of digestive tract | 7.65e-16 | 114 |
simple columnar epithelium | 5.82e-13 | 11 |
small intestine | 3.34e-09 | 4 |
exocrine gland | 5.94e-09 | 25 |
exocrine system | 5.94e-09 | 25 |
gut epithelium | 1.98e-07 | 55 |
ileal mucosa | 3.34e-07 | 3 |
ileum | 3.34e-07 | 3 |
mucosa of small intestine | 3.34e-07 | 3 |
wall of small intestine | 3.34e-07 | 3 |