FFCP PHASE1:Mm9::chr10:74684870..74684903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=871 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:74684870..74684903,+ | |||
|description=CAGE_peak_at_chr10:74684870..74684903,+ | |description=CAGE_peak_at_chr10:74684870..74684903,+ | ||
|id=chr10:74684870..74684903,+ | |id=chr10:74684870..74684903,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.71e-08!6;CL:0000677!1.71e-08!6;CL:0000212!1.71e-08!6;CL:0000584!1.71e-08!6;CL:0000075!4.37e-07!7 | |ontology_enrichment_celltype=CL:0000239!1.71e-08!6;CL:0000677!1.71e-08!6;CL:0000212!1.71e-08!6;CL:0000584!1.71e-08!6;CL:0000075!4.37e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.78e-12,6;CL:0000677,2.78e-12,6;CL:0000584,2.78e-12,6;CL:0000075,1.78e-10,7;CL:0000682,2.45e-09,3;CL:0000066,4.44e-08,25;CL:0002563,4.62e-08,9;CL:0002251,4.62e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.34e-13!43;UBERON:0000344!3.33e-13!15;UBERON:0001242!5.31e-11!13;UBERON:0000060!5.31e-11!13;UBERON:0001262!5.31e-11!13;UBERON:0004786!5.31e-11!13;UBERON:0005409!3.92e-09!59;UBERON:0004923!6.03e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.57e-36,31;UBERON:0005409,3.84e-22,47;UBERON:0000344,4.15e-21,15;UBERON:0001242,1.48e-16,13;UBERON:0001262,1.48e-16,13;UBERON:0004786,1.48e-16,13;UBERON:0004923,2.40e-12,24;UBERON:0001007,3.30e-12,116;UBERON:0001555,3.30e-12,116;UBERON:0007026,3.30e-12,116;UBERON:0004119,6.64e-12,118;UBERON:0000925,6.64e-12,118;UBERON:0006595,6.64e-12,118;UBERON:0002108,2.64e-11,4;UBERON:0004921,3.40e-10,114;UBERON:0000331,1.41e-08,3;UBERON:0002116,1.41e-08,3;UBERON:0001204,1.41e-08,3;UBERON:0001168,1.41e-08,3;UBERON:0003350,4.62e-08,9;UBERON:0004808,4.62e-08,9;UBERON:0001277,4.62e-08,9 | |||
|phase1_expression=0,15.0059425284925,6.82498859084304,13.0059610861937,14.0250804384977,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,3.67982572424835,4.35877634027623,12.0588712464154,6.03066794622705,5.17130958446134,3.42042155021473,2.52030129759931,2.43903561720835,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,20.3991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,7.91916871146633,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8513579321737,7.1401652999157,0,0,0,0,0,0.190225626112559,6.16887780007865,2.30578536613615,2.5133520880027,1.1937388322469,3.50935356814416,9.88701349519644,6.48414149624083,3.98282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0.220528398054962,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.777689839750757,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,15.0059425284925,6.82498859084304,13.0059610861937,14.0250804384977,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,3.67982572424835,4.35877634027623,12.0588712464154,6.03066794622705,5.17130958446134,3.42042155021473,2.52030129759931,2.43903561720835,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,20.3991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,7.91916871146633,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8513579321737,7.1401652999157,0,0,0,0,0,0.190225626112559,6.16887780007865,2.30578536613615,2.5133520880027,1.1937388322469,3.50935356814416,9.88701349519644,6.48414149624083,3.98282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0.220528398054962,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.777689839750757,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:74684870..74684903,+ | |short_description=p@chr10:74684870..74684903,+ | ||
}} | }} |
Latest revision as of 16:30, 4 August 2015
Short description: | p@chr10:74684870..74684903, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:74684870..74684903, + |
Coexpression cluster: | MCL_coexpression_mm9:871 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.78e-12 | 6 |
gut absorptive cell | 2.78e-12 | 6 |
enterocyte | 2.78e-12 | 6 |
columnar/cuboidal epithelial cell | 1.78e-10 | 7 |
M cell of gut | 2.45e-09 | 3 |
epithelial cell | 4.44e-08 | 25 |
intestinal epithelial cell | 4.62e-08 | 9 |
epithelial cell of alimentary canal | 4.62e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.57e-36 | 31 |
gastrointestinal system | 3.84e-22 | 47 |
mucosa | 4.15e-21 | 15 |
intestinal mucosa | 1.48e-16 | 13 |
wall of intestine | 1.48e-16 | 13 |
gastrointestinal system mucosa | 1.48e-16 | 13 |
organ component layer | 2.40e-12 | 24 |
digestive system | 3.30e-12 | 116 |
digestive tract | 3.30e-12 | 116 |
primitive gut | 3.30e-12 | 116 |
endoderm-derived structure | 6.64e-12 | 118 |
endoderm | 6.64e-12 | 118 |
presumptive endoderm | 6.64e-12 | 118 |
small intestine | 2.64e-11 | 4 |
subdivision of digestive tract | 3.40e-10 | 114 |
ileal mucosa | 1.41e-08 | 3 |
ileum | 1.41e-08 | 3 |
mucosa of small intestine | 1.41e-08 | 3 |
wall of small intestine | 1.41e-08 | 3 |
epithelium of mucosa | 4.62e-08 | 9 |
gastrointestinal system epithelium | 4.62e-08 | 9 |
intestinal epithelium | 4.62e-08 | 9 |