FFCP PHASE1:Mm9::chr10:74594429..74594450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:74594429..74594450,- | |||
|description=CAGE_peak_at_chr10:74594429..74594450,- | |description=CAGE_peak_at_chr10:74594429..74594450,- | ||
|id=chr10:74594429..74594450,- | |id=chr10:74594429..74594450,- | ||
|ontology_enrichment_celltype=CL:0000239!2.79e-16!6;CL:0000677!2.79e-16!6;CL:0000212!2.79e-16!6;CL:0000584!2.79e-16!6;CL:0000075!7.47e-14!7;CL:0002563!1.30e-10!9;CL:0002251!1.30e-10!9;CL:0000473!6.91e-09!3;CL:0000627!6.91e-09!3;CL:0000682!6.91e-09!3;CL:0000066!2.11e-07!25 | |ontology_enrichment_celltype=CL:0000239!2.79e-16!6;CL:0000677!2.79e-16!6;CL:0000212!2.79e-16!6;CL:0000584!2.79e-16!6;CL:0000075!7.47e-14!7;CL:0002563!1.30e-10!9;CL:0002251!1.30e-10!9;CL:0000473!6.91e-09!3;CL:0000627!6.91e-09!3;CL:0000682!6.91e-09!3;CL:0000066!2.11e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.16e-13,3;CL:0000239,1.99e-12,6;CL:0000677,1.99e-12,6;CL:0000584,1.99e-12,6;CL:0000075,1.15e-10,7;CL:0002563,2.58e-08,9;CL:0002251,2.58e-08,9;CL:0000066,6.98e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.86e-33!43;UBERON:0000344!5.05e-24!15;UBERON:0005409!7.03e-23!59;UBERON:0001242!3.02e-19!13;UBERON:0000060!3.02e-19!13;UBERON:0001262!3.02e-19!13;UBERON:0004786!3.02e-19!13;UBERON:0004923!5.02e-14!24;UBERON:0003350!1.30e-10!9;UBERON:0004808!1.30e-10!9;UBERON:0001277!1.30e-10!9;UBERON:0001007!1.70e-09!128;UBERON:0001555!1.70e-09!128;UBERON:0007026!1.70e-09!128;UBERON:0004119!2.94e-09!130;UBERON:0000925!2.94e-09!130;UBERON:0006595!2.94e-09!130;UBERON:0000485!1.51e-08!11;UBERON:0000331!3.42e-08!3;UBERON:0002116!3.42e-08!3;UBERON:0001204!3.42e-08!3;UBERON:0001168!3.42e-08!3;UBERON:0004921!9.03e-08!126;UBERON:0004185!9.03e-08!126 | |ontology_enrichment_uberon=UBERON:0000160!1.86e-33!43;UBERON:0000344!5.05e-24!15;UBERON:0005409!7.03e-23!59;UBERON:0001242!3.02e-19!13;UBERON:0000060!3.02e-19!13;UBERON:0001262!3.02e-19!13;UBERON:0004786!3.02e-19!13;UBERON:0004923!5.02e-14!24;UBERON:0003350!1.30e-10!9;UBERON:0004808!1.30e-10!9;UBERON:0001277!1.30e-10!9;UBERON:0001007!1.70e-09!128;UBERON:0001555!1.70e-09!128;UBERON:0007026!1.70e-09!128;UBERON:0004119!2.94e-09!130;UBERON:0000925!2.94e-09!130;UBERON:0006595!2.94e-09!130;UBERON:0000485!1.51e-08!11;UBERON:0000331!3.42e-08!3;UBERON:0002116!3.42e-08!3;UBERON:0001204!3.42e-08!3;UBERON:0001168!3.42e-08!3;UBERON:0004921!9.03e-08!126;UBERON:0004185!9.03e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.28e-33,31;UBERON:0000344,2.79e-22,15;UBERON:0005409,9.92e-21,47;UBERON:0001242,8.59e-16,13;UBERON:0001262,8.59e-16,13;UBERON:0004786,8.59e-16,13;UBERON:0004923,1.94e-13,24;UBERON:0001962,1.49e-09,2;UBERON:0001961,1.49e-09,2;UBERON:0001744,1.49e-09,2;UBERON:0002108,1.81e-09,4;UBERON:0001007,4.27e-09,116;UBERON:0001555,4.27e-09,116;UBERON:0007026,4.27e-09,116;UBERON:0004119,6.85e-09,118;UBERON:0000925,6.85e-09,118;UBERON:0006595,6.85e-09,118;UBERON:0003350,2.58e-08,9;UBERON:0004808,2.58e-08,9;UBERON:0001277,2.58e-08,9;UBERON:0004921,6.07e-07,114;UBERON:0000485,8.22e-07,11 | |||
|phase1_expression=0,7.67745896806594,5.91499011206397,4.23449895829562,6.51164448930251,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,2.75291137280604,3.44539178469012,1.7230479846363,3.44753972297422,0.760093677825496,1.26015064879965,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,5.02456076660734,0,0,0,0.403367049246685,0.22237804384487,0.380451252225118,1.89811624617805,1.31759163779209,0.754005626400808,1.59165177632921,0.58489226135736,3.59527763461689,3.02593269824572,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,5.91499011206397,4.23449895829562,6.51164448930251,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,2.75291137280604,3.44539178469012,1.7230479846363,3.44753972297422,0.760093677825496,1.26015064879965,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,5.02456076660734,0,0,0,0.403367049246685,0.22237804384487,0.380451252225118,1.89811624617805,1.31759163779209,0.754005626400808,1.59165177632921,0.58489226135736,3.59527763461689,3.02593269824572,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:74594429..74594450,- | |short_description=p@chr10:74594429..74594450,- | ||
}} | }} |
Latest revision as of 16:29, 4 August 2015
Short description: | p@chr10:74594429..74594450, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:74594429..74594450, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.16e-13 | 3 |
brush border epithelial cell | 1.99e-12 | 6 |
gut absorptive cell | 1.99e-12 | 6 |
enterocyte | 1.99e-12 | 6 |
columnar/cuboidal epithelial cell | 1.15e-10 | 7 |
intestinal epithelial cell | 2.58e-08 | 9 |
epithelial cell of alimentary canal | 2.58e-08 | 9 |
epithelial cell | 6.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.28e-33 | 31 |
mucosa | 2.79e-22 | 15 |
gastrointestinal system | 9.92e-21 | 47 |
intestinal mucosa | 8.59e-16 | 13 |
wall of intestine | 8.59e-16 | 13 |
gastrointestinal system mucosa | 8.59e-16 | 13 |
organ component layer | 1.94e-13 | 24 |
gut-associated lymphoid tissue | 1.49e-09 | 2 |
mucosa-associated lymphoid tissue | 1.49e-09 | 2 |
lymphoid tissue | 1.49e-09 | 2 |
small intestine | 1.81e-09 | 4 |
digestive system | 4.27e-09 | 116 |
digestive tract | 4.27e-09 | 116 |
primitive gut | 4.27e-09 | 116 |
endoderm-derived structure | 6.85e-09 | 118 |
endoderm | 6.85e-09 | 118 |
presumptive endoderm | 6.85e-09 | 118 |
epithelium of mucosa | 2.58e-08 | 9 |
gastrointestinal system epithelium | 2.58e-08 | 9 |
intestinal epithelium | 2.58e-08 | 9 |
subdivision of digestive tract | 6.07e-07 | 114 |
simple columnar epithelium | 8.22e-07 | 11 |