FFCP PHASE1:Mm9::chr4:119330693..119330713,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:119330693..119330713,- | |||
|description=CAGE_peak_at_chr4:119330693..119330713,- | |description=CAGE_peak_at_chr4:119330693..119330713,- | ||
|id=chr4:119330693..119330713,- | |id=chr4:119330693..119330713,- | ||
|ontology_enrichment_celltype=CL:0000239!5.31e-16!6;CL:0000677!5.31e-16!6;CL:0000212!5.31e-16!6;CL:0000584!5.31e-16!6;CL:0000075!1.33e-13!7;CL:0002563!2.10e-10!9;CL:0002251!2.10e-10!9;CL:0000473!2.48e-09!3;CL:0000627!2.48e-09!3;CL:0000682!2.48e-09!3;CL:0000066!2.22e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.03e-24,6;CL:0000677,1.03e-24,6;CL:0000584,1.03e-24,6;CL:0000075,4.01e-21,7;CL:0002563,2.51e-16,9;CL:0002251,2.51e-16,9;CL:0000682,5.18e-14,3;CL:0000066,1.58e-12,25;CL:0002076,1.37e-09,15;CL:0000223,4.69e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.95e-23!15;UBERON:0000160!3.25e-19!43;UBERON:0001242!1.12e-18!13;UBERON:0000060!1.12e-18!13;UBERON:0001262!1.12e-18!13;UBERON:0004786!1.12e-18!13;UBERON:0004923!1.97e-18!24;UBERON:0005409!1.00e-12!59;UBERON:0003350!2.10e-10!9;UBERON:0004808!2.10e-10!9;UBERON:0001277!2.10e-10!9;UBERON:0005795!2.29e-09!4;UBERON:0000995!2.29e-09!4;UBERON:0000485!2.28e-08!11;UBERON:0000331!3.28e-08!3;UBERON:0002116!3.28e-08!3;UBERON:0001204!3.28e-08!3;UBERON:0001168!3.28e-08!3;UBERON:0003975!1.66e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.09e-37,15;UBERON:0000160,2.12e-30,31;UBERON:0001242,1.04e-29,13;UBERON:0001262,1.04e-29,13;UBERON:0004786,1.04e-29,13;UBERON:0004923,1.22e-22,24;UBERON:0005409,3.88e-19,47;UBERON:0003350,2.51e-16,9;UBERON:0004808,2.51e-16,9;UBERON:0001277,2.51e-16,9;UBERON:0000485,2.87e-13,11;UBERON:0000331,3.22e-12,3;UBERON:0002116,3.22e-12,3;UBERON:0001204,3.22e-12,3;UBERON:0001168,3.22e-12,3;UBERON:0001962,1.25e-09,2;UBERON:0001961,1.25e-09,2;UBERON:0001744,1.25e-09,2;UBERON:0002108,2.70e-09,4;UBERON:0001007,2.77e-08,116;UBERON:0001555,2.77e-08,116;UBERON:0007026,2.77e-08,116;UBERON:0004119,4.33e-08,118;UBERON:0000925,4.33e-08,118;UBERON:0006595,4.33e-08,118 | |||
|phase1_expression=0,18.4956966048861,12.739978702907,3.93203474698879,4.50806156951712,4.36486106970913,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,14.7193028969934,13.535147582963,21.2465826722557,21.1073378117947,16.8067561494993,1.90023419456374,1.00812051903972,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.55346189993443,0,0,0,0,0,0,1.89811624617805,0.658795818896044,0.251335208800269,0,0.38992817423824,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0,0,0.0701358198903186,0,0,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,18.4956966048861,12.739978702907,3.93203474698879,4.50806156951712,4.36486106970913,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,14.7193028969934,13.535147582963,21.2465826722557,21.1073378117947,16.8067561494993,1.90023419456374,1.00812051903972,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.55346189993443,0,0,0,0,0,0,1.89811624617805,0.658795818896044,0.251335208800269,0,0.38992817423824,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0,0,0.0701358198903186,0,0,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:119330693..119330713,- | |short_description=p@chr4:119330693..119330713,- | ||
}} | }} |
Latest revision as of 16:17, 4 August 2015
Short description: | p@chr4:119330693..119330713, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119330693..119330713, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.03e-24 | 6 |
gut absorptive cell | 1.03e-24 | 6 |
enterocyte | 1.03e-24 | 6 |
columnar/cuboidal epithelial cell | 4.01e-21 | 7 |
intestinal epithelial cell | 2.51e-16 | 9 |
epithelial cell of alimentary canal | 2.51e-16 | 9 |
M cell of gut | 5.18e-14 | 3 |
epithelial cell | 1.58e-12 | 25 |
endo-epithelial cell | 1.37e-09 | 15 |
endodermal cell | 4.69e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.09e-37 | 15 |
intestine | 2.12e-30 | 31 |
intestinal mucosa | 1.04e-29 | 13 |
wall of intestine | 1.04e-29 | 13 |
gastrointestinal system mucosa | 1.04e-29 | 13 |
organ component layer | 1.22e-22 | 24 |
gastrointestinal system | 3.88e-19 | 47 |
epithelium of mucosa | 2.51e-16 | 9 |
gastrointestinal system epithelium | 2.51e-16 | 9 |
intestinal epithelium | 2.51e-16 | 9 |
simple columnar epithelium | 2.87e-13 | 11 |
ileal mucosa | 3.22e-12 | 3 |
ileum | 3.22e-12 | 3 |
mucosa of small intestine | 3.22e-12 | 3 |
wall of small intestine | 3.22e-12 | 3 |
gut-associated lymphoid tissue | 1.25e-09 | 2 |
mucosa-associated lymphoid tissue | 1.25e-09 | 2 |
lymphoid tissue | 1.25e-09 | 2 |
small intestine | 2.70e-09 | 4 |
digestive system | 2.77e-08 | 116 |
digestive tract | 2.77e-08 | 116 |
primitive gut | 2.77e-08 | 116 |
endoderm-derived structure | 4.33e-08 | 118 |
endoderm | 4.33e-08 | 118 |
presumptive endoderm | 4.33e-08 | 118 |