FFCP PHASE1:Mm9::chr4:119311395..119311417,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=424|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119311395..119311417,-|id=chr4:119311395..119311417,-|ontology_enrichment_celltype=CL:0000239!6.80e-16!6;CL:0000677!6.80e-16!6;CL:0000212!6.80e-16!6;CL:0000584!6.80e-16!6;CL:0000075!1.57e-13!7;CL:0002563!2.24e-10!9;CL:0002251!2.24e-10!9;CL:0000473!3.25e-09!3;CL:0000627!3.25e-09!3;CL:0000682!3.25e-09!3;CL:0000066!2.03e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,7.84e-18,3;CL:0000239,2.51e-09,6;CL:0000677,2.51e-09,6;CL:0000584,2.51e-09,6;CL:0000075,4.55e-08,7;CL:0000066,5.21e-08,25;CL:0000473,5.69e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.14e-28!43;UBERON:0005409!1.73e-21!59;UBERON:0000344!4.84e-21!15;UBERON:0001242!4.01e-16!13;UBERON:0000060!4.01e-16!13;UBERON:0001262!4.01e-16!13;UBERON:0004786!4.01e-16!13;UBERON:0004923!1.39e-14!24;UBERON:0003350!2.24e-10!9;UBERON:0004808!2.24e-10!9;UBERON:0001277!2.24e-10!9;UBERON:0004119!9.52e-10!130;UBERON:0000925!9.52e-10!130;UBERON:0006595!9.52e-10!130;UBERON:0000331!9.67e-10!3;UBERON:0002116!9.67e-10!3;UBERON:0001204!9.67e-10!3;UBERON:0001168!9.67e-10!3;UBERON:0001007!5.10e-09!128;UBERON:0001555!5.10e-09!128;UBERON:0007026!5.10e-09!128;UBERON:0000485!2.29e-08!11;UBERON:0004921!2.85e-07!126;UBERON:0004185!2.85e-07!126;UBERON:0001962!4.85e-07!2;UBERON:0001961!4.85e-07!2;UBERON:0001744!4.85e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-25,15;UBERON:0000331,5.95e-19,3;UBERON:0002116,5.95e-19,3;UBERON:0001204,5.95e-19,3;UBERON:0001168,5.95e-19,3;UBERON:0001242,3.30e-16,13;UBERON:0001262,3.30e-16,13;UBERON:0004786,3.30e-16,13;UBERON:0004923,3.21e-15,24;UBERON:0000160,2.10e-14,31;UBERON:0002108,2.28e-14,4;UBERON:0001962,3.20e-13,2;UBERON:0001961,3.20e-13,2;UBERON:0001744,3.20e-13,2;UBERON:0005409,1.91e-11,47;UBERON:0002465,4.11e-09,3;UBERON:0003199,1.59e-07,1;UBERON:0001153,3.67e-07,1;UBERON:0001045,3.67e-07,1|phase1_expression=0,2.09385244583617,1.81999695755814,0.30246421130683,0.500895729946347,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,3.21172993494038,1.14846392823004,1.29228598847722,3.01659725760245,4.75058548640935,2.01624103807945,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,0,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0.898819408654221,1.29682829924817,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40690909192096,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr4:119311395..119311417,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:119311395..119311417,- | |||
|description=CAGE_peak_at_chr4:119311395..119311417,- | |||
|id=chr4:119311395..119311417,- | |||
|ontology_enrichment_celltype=CL:0000239!6.80e-16!6;CL:0000677!6.80e-16!6;CL:0000212!6.80e-16!6;CL:0000584!6.80e-16!6;CL:0000075!1.57e-13!7;CL:0002563!2.24e-10!9;CL:0002251!2.24e-10!9;CL:0000473!3.25e-09!3;CL:0000627!3.25e-09!3;CL:0000682!3.25e-09!3;CL:0000066!2.03e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.84e-18,3;CL:0000239,2.51e-09,6;CL:0000677,2.51e-09,6;CL:0000584,2.51e-09,6;CL:0000075,4.55e-08,7;CL:0000066,5.21e-08,25;CL:0000473,5.69e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.14e-28!43;UBERON:0005409!1.73e-21!59;UBERON:0000344!4.84e-21!15;UBERON:0001242!4.01e-16!13;UBERON:0000060!4.01e-16!13;UBERON:0001262!4.01e-16!13;UBERON:0004786!4.01e-16!13;UBERON:0004923!1.39e-14!24;UBERON:0003350!2.24e-10!9;UBERON:0004808!2.24e-10!9;UBERON:0001277!2.24e-10!9;UBERON:0004119!9.52e-10!130;UBERON:0000925!9.52e-10!130;UBERON:0006595!9.52e-10!130;UBERON:0000331!9.67e-10!3;UBERON:0002116!9.67e-10!3;UBERON:0001204!9.67e-10!3;UBERON:0001168!9.67e-10!3;UBERON:0001007!5.10e-09!128;UBERON:0001555!5.10e-09!128;UBERON:0007026!5.10e-09!128;UBERON:0000485!2.29e-08!11;UBERON:0004921!2.85e-07!126;UBERON:0004185!2.85e-07!126;UBERON:0001962!4.85e-07!2;UBERON:0001961!4.85e-07!2;UBERON:0001744!4.85e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-25,15;UBERON:0000331,5.95e-19,3;UBERON:0002116,5.95e-19,3;UBERON:0001204,5.95e-19,3;UBERON:0001168,5.95e-19,3;UBERON:0001242,3.30e-16,13;UBERON:0001262,3.30e-16,13;UBERON:0004786,3.30e-16,13;UBERON:0004923,3.21e-15,24;UBERON:0000160,2.10e-14,31;UBERON:0002108,2.28e-14,4;UBERON:0001962,3.20e-13,2;UBERON:0001961,3.20e-13,2;UBERON:0001744,3.20e-13,2;UBERON:0005409,1.91e-11,47;UBERON:0002465,4.11e-09,3;UBERON:0003199,1.59e-07,1;UBERON:0001153,3.67e-07,1;UBERON:0001045,3.67e-07,1 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,0.30246421130683,0.500895729946347,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,3.21172993494038,1.14846392823004,1.29228598847722,3.01659725760245,4.75058548640935,2.01624103807945,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,0,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0.898819408654221,1.29682829924817,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40690909192096,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:119311395..119311417,- | |||
}} |
Latest revision as of 16:14, 4 August 2015
Short description: | p@chr4:119311395..119311417, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119311395..119311417, - |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.84e-18 | 3 |
brush border epithelial cell | 2.51e-09 | 6 |
gut absorptive cell | 2.51e-09 | 6 |
enterocyte | 2.51e-09 | 6 |
columnar/cuboidal epithelial cell | 4.55e-08 | 7 |
epithelial cell | 5.21e-08 | 25 |
defensive cell | 5.69e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.50e-25 | 15 |
ileal mucosa | 5.95e-19 | 3 |
ileum | 5.95e-19 | 3 |
mucosa of small intestine | 5.95e-19 | 3 |
wall of small intestine | 5.95e-19 | 3 |
intestinal mucosa | 3.30e-16 | 13 |
wall of intestine | 3.30e-16 | 13 |
gastrointestinal system mucosa | 3.30e-16 | 13 |
organ component layer | 3.21e-15 | 24 |
intestine | 2.10e-14 | 31 |
small intestine | 2.28e-14 | 4 |
gut-associated lymphoid tissue | 3.20e-13 | 2 |
mucosa-associated lymphoid tissue | 3.20e-13 | 2 |
lymphoid tissue | 3.20e-13 | 2 |
gastrointestinal system | 1.91e-11 | 47 |
lymphoid system | 4.11e-09 | 3 |
egg chamber | 1.59e-07 | 1 |
caecum | 3.67e-07 | 1 |
midgut | 3.67e-07 | 1 |