FFCP PHASE1:Mm9::chr10:62501849..62501865,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:62501849..62501865,+
|short_description=p@chr10:62501849..62501865,+
|description=CAGE_peak_at_chr10:62501849..62501865,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:62501849..62501865,+ | |||
|description=CAGE_peak_at_chr10:62501849..62501865,+ | |||
|id=chr10:62501849..62501865,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.14e-07!9;CL:0002251!1.14e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.24e-09,25;CL:0000239,2.51e-09,6;CL:0000677,2.51e-09,6;CL:0000584,2.51e-09,6;CL:0000075,7.54e-08,7;CL:0000223,1.34e-07,20;CL:0002563,1.63e-07,9;CL:0002251,1.63e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.78e-23!43;UBERON:0001007!5.26e-22!128;UBERON:0001555!5.26e-22!128;UBERON:0007026!5.26e-22!128;UBERON:0005409!8.29e-22!59;UBERON:0004119!2.91e-21!130;UBERON:0000925!2.91e-21!130;UBERON:0006595!2.91e-21!130;UBERON:0004921!1.61e-20!126;UBERON:0004185!1.61e-20!126;UBERON:0000344!6.56e-12!15;UBERON:0009854!8.94e-12!23;UBERON:0009856!8.94e-12!23;UBERON:0002107!4.49e-11!22;UBERON:0007499!4.49e-11!22;UBERON:0006925!4.49e-11!22;UBERON:0009497!4.49e-11!22;UBERON:0000015!4.49e-11!22;UBERON:0002423!4.49e-11!22;UBERON:0006235!4.49e-11!22;UBERON:0008835!4.49e-11!22;UBERON:0003894!4.49e-11!22;UBERON:0004161!4.49e-11!22;UBERON:0008836!4.49e-11!22;UBERON:0001242!2.65e-10!13;UBERON:0000060!2.65e-10!13;UBERON:0001262!2.65e-10!13;UBERON:0004786!2.65e-10!13;UBERON:0002365!5.99e-09!25;UBERON:0002330!5.99e-09!25;UBERON:0005177!3.69e-08!85;UBERON:0003350!1.14e-07!9;UBERON:0004808!1.14e-07!9;UBERON:0001277!1.14e-07!9;UBERON:0002108!2.09e-07!16;UBERON:0005911!3.07e-07!69;UBERON:0004923!4.57e-07!24;UBERON:0005172!6.47e-07!49;UBERON:0005173!6.47e-07!49;UBERON:0002417!6.47e-07!49;UBERON:0000916!6.47e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.07e-22,31;UBERON:0005409,5.13e-19,47;UBERON:0001007,6.30e-17,116;UBERON:0001555,6.30e-17,116;UBERON:0007026,6.30e-17,116;UBERON:0004119,1.98e-16,118;UBERON:0000925,1.98e-16,118;UBERON:0006595,1.98e-16,118;UBERON:0004921,3.16e-15,114;UBERON:0009854,7.26e-13,23;UBERON:0009856,7.26e-13,23;UBERON:0000344,2.00e-12,15;UBERON:0002107,7.69e-12,22;UBERON:0007499,7.69e-12,22;UBERON:0006925,7.69e-12,22;UBERON:0009497,7.69e-12,22;UBERON:0000015,7.69e-12,22;UBERON:0002423,7.69e-12,22;UBERON:0006235,7.69e-12,22;UBERON:0008835,7.69e-12,22;UBERON:0003894,7.69e-12,22;UBERON:0004161,7.69e-12,22;UBERON:0008836,7.69e-12,22;UBERON:0001242,4.95e-10,13;UBERON:0001262,4.95e-10,13;UBERON:0004786,4.95e-10,13;UBERON:0002365,6.03e-10,25;UBERON:0002330,6.03e-10,25;UBERON:0003929,1.40e-07,55;UBERON:0003350,1.63e-07,9;UBERON:0004808,1.63e-07,9;UBERON:0001277,1.63e-07,9 | |||
|phase1_expression=0,8.37540978334467,8.18998630901165,26.3143863836942,32.0573267165662,1.84667199103079,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,8.95957567643077,6.8822784320151,5.16808767703518,7.75371593086335,7.11055067863434,15.3918969759663,1.00812051903972,0.443461021310609,0,0,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,14.2793980078628,38.8586297979228,35.0879265421741,23.7454250161588,5.47733238513832,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,6.87571473325215,0,0,0.257734922644187,0.605050573870028,1.11189021922435,2.28270751335071,7.11793592316767,3.95277491337626,6.53471542880701,6.96347652144028,2.53453313254856,12.5834717211591,12.752144942607,18.5201384126561,0,0.114248512609729,0,0.814605311381257,0.387904974335251,0.771494018793504,2.97211724484009,4.87113488332687,5.49495547444812,6.91024117962083,37.3530310129808,0,0,0,0.608580364165509,0.72353147925725,1.52775511068852,0.863088412352432,0.486405680325106,4.11842119782122,5.75072826109418,6.69853705803306,10.2972432127805,23.9949934049756,25.6538301336334,25.5695066322585,0,0,0,0,0,0.167506257441816,0.714130922658041,0.975668239288994,0.472905432318573,1.10732344824387,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,3.98235415019888,0,0,1.69744571780308,1.18120757152309,0.307435147943927,1.55056975900933,1.09060118843252,0.712994756769443,2.21225730555071,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03590593552537,0,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0,0,0.324016022465404,0,0.87345025498471,1.34864346384821,1.65306911450672,1.04702376793612,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,1.23625770240992,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,8.37540978334467,8.18998630901165,26.3143863836942,32.0573267165662,1.84667199103079,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,8.95957567643077,6.8822784320151,5.16808767703518,7.75371593086335,7.11055067863434,15.3918969759663,1.00812051903972,0.443461021310609,0,0,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,14.2793980078628,38.8586297979228,35.0879265421741,23.7454250161588,5.47733238513832,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,6.87571473325215,0,0,0.257734922644187,0.605050573870028,1.11189021922435,2.28270751335071,7.11793592316767,3.95277491337626,6.53471542880701,6.96347652144028,2.53453313254856,12.5834717211591,12.752144942607,18.5201384126561,0,0.114248512609729,0,0.814605311381257,0.387904974335251,0.771494018793504,2.97211724484009,4.87113488332687,5.49495547444812,6.91024117962083,37.3530310129808,0,0,0,0.608580364165509,0.72353147925725,1.52775511068852,0.863088412352432,0.486405680325106,4.11842119782122,5.75072826109418,6.69853705803306,10.2972432127805,23.9949934049756,25.6538301336334,25.5695066322585,0,0,0,0,0,0.167506257441816,0.714130922658041,0.975668239288994,0.472905432318573,1.10732344824387,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,3.98235415019888,0,0,1.69744571780308,1.18120757152309,0.307435147943927,1.55056975900933,1.09060118843252,0.712994756769443,2.21225730555071,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03590593552537,0,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0,0,0.324016022465404,0,0.87345025498471,1.34864346384821,1.65306911450672,1.04702376793612,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,1.23625770240992,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p@chr10:62501849..62501865,+ | |||
}} | }} |
Latest revision as of 14:21, 4 August 2015
Short description: | p@chr10:62501849..62501865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:62501849..62501865, + |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.24e-09 | 25 |
brush border epithelial cell | 2.51e-09 | 6 |
gut absorptive cell | 2.51e-09 | 6 |
enterocyte | 2.51e-09 | 6 |
columnar/cuboidal epithelial cell | 7.54e-08 | 7 |
endodermal cell | 1.34e-07 | 20 |
intestinal epithelial cell | 1.63e-07 | 9 |
epithelial cell of alimentary canal | 1.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.07e-22 | 31 |
gastrointestinal system | 5.13e-19 | 47 |
digestive system | 6.30e-17 | 116 |
digestive tract | 6.30e-17 | 116 |
primitive gut | 6.30e-17 | 116 |
endoderm-derived structure | 1.98e-16 | 118 |
endoderm | 1.98e-16 | 118 |
presumptive endoderm | 1.98e-16 | 118 |
subdivision of digestive tract | 3.16e-15 | 114 |
digestive tract diverticulum | 7.26e-13 | 23 |
sac | 7.26e-13 | 23 |
mucosa | 2.00e-12 | 15 |
liver | 7.69e-12 | 22 |
epithelial sac | 7.69e-12 | 22 |
digestive gland | 7.69e-12 | 22 |
epithelium of foregut-midgut junction | 7.69e-12 | 22 |
anatomical boundary | 7.69e-12 | 22 |
hepatobiliary system | 7.69e-12 | 22 |
foregut-midgut junction | 7.69e-12 | 22 |
hepatic diverticulum | 7.69e-12 | 22 |
liver primordium | 7.69e-12 | 22 |
septum transversum | 7.69e-12 | 22 |
liver bud | 7.69e-12 | 22 |
intestinal mucosa | 4.95e-10 | 13 |
wall of intestine | 4.95e-10 | 13 |
gastrointestinal system mucosa | 4.95e-10 | 13 |
exocrine gland | 6.03e-10 | 25 |
exocrine system | 6.03e-10 | 25 |
gut epithelium | 1.40e-07 | 55 |
epithelium of mucosa | 1.63e-07 | 9 |
gastrointestinal system epithelium | 1.63e-07 | 9 |
intestinal epithelium | 1.63e-07 | 9 |