FFCP PHASE1:Mm9::chr10:59813443..59813453,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:59813443..59813453,+ | |||
|description=CAGE_peak_at_chr10:59813443..59813453,+ | |description=CAGE_peak_at_chr10:59813443..59813453,+ | ||
|id=chr10:59813443..59813453,+ | |id=chr10:59813443..59813453,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.23e-47!9;CL:0000789!1.23e-47!9;CL:0002420!1.23e-47!9;CL:0002419!1.23e-47!9;CL:0000790!1.23e-47!9;CL:0000838!1.02e-43!12;CL:0000624!2.17e-42!8;CL:0000542!2.88e-40!13;CL:0000051!2.88e-40!13;CL:0000084!8.43e-39!11;CL:0000827!8.43e-39!11;CL:0000893!2.73e-32!6;CL:0002489!2.73e-32!6;CL:0000898!2.73e-32!6;CL:0000809!2.73e-32!6;CL:0000810!2.73e-32!6;CL:0000895!2.73e-32!6;CL:0000808!2.73e-32!6;CL:0000894!2.73e-32!6;CL:0000806!2.73e-32!6;CL:0000807!2.73e-32!6;CL:0000805!2.73e-32!6;CL:0002425!2.73e-32!6;CL:0002436!2.73e-32!6;CL:0002427!2.73e-32!6;CL:0002428!2.73e-32!6;CL:0002429!2.73e-32!6;CL:0002433!2.73e-32!6;CL:0002431!2.73e-32!6;CL:0002432!2.73e-32!6;CL:0000738!1.64e-30!17;CL:0002087!1.64e-30!17;CL:0000988!3.09e-26!32;CL:0002032!3.09e-26!32;CL:0000037!3.09e-26!32;CL:0000566!3.09e-26!32;CL:0000837!3.09e-26!32;CL:0002320!1.19e-20!46;CL:0000134!1.19e-20!46;CL:0002031!2.41e-20!25;CL:0000219!2.60e-17!54;CL:0000063!8.19e-14!66;CL:0000034!1.42e-13!97;CL:0000144!1.88e-10!121;CL:0000012!1.88e-10!121;CL:0000723!1.81e-09!91;CL:0000048!1.81e-09!91;CL:0000548!4.68e-07!115;CL:0000004!4.68e-07!115;CL:0000255!4.68e-07!115;CL:0000815!7.38e-07!1;CL:0000792!7.38e-07!1;CL:0002371!8.02e-07!118;CL:0000625!8.36e-07!1 | |ontology_enrichment_celltype=CL:0000791!1.23e-47!9;CL:0000789!1.23e-47!9;CL:0002420!1.23e-47!9;CL:0002419!1.23e-47!9;CL:0000790!1.23e-47!9;CL:0000838!1.02e-43!12;CL:0000624!2.17e-42!8;CL:0000542!2.88e-40!13;CL:0000051!2.88e-40!13;CL:0000084!8.43e-39!11;CL:0000827!8.43e-39!11;CL:0000893!2.73e-32!6;CL:0002489!2.73e-32!6;CL:0000898!2.73e-32!6;CL:0000809!2.73e-32!6;CL:0000810!2.73e-32!6;CL:0000895!2.73e-32!6;CL:0000808!2.73e-32!6;CL:0000894!2.73e-32!6;CL:0000806!2.73e-32!6;CL:0000807!2.73e-32!6;CL:0000805!2.73e-32!6;CL:0002425!2.73e-32!6;CL:0002436!2.73e-32!6;CL:0002427!2.73e-32!6;CL:0002428!2.73e-32!6;CL:0002429!2.73e-32!6;CL:0002433!2.73e-32!6;CL:0002431!2.73e-32!6;CL:0002432!2.73e-32!6;CL:0000738!1.64e-30!17;CL:0002087!1.64e-30!17;CL:0000988!3.09e-26!32;CL:0002032!3.09e-26!32;CL:0000037!3.09e-26!32;CL:0000566!3.09e-26!32;CL:0000837!3.09e-26!32;CL:0002320!1.19e-20!46;CL:0000134!1.19e-20!46;CL:0002031!2.41e-20!25;CL:0000219!2.60e-17!54;CL:0000063!8.19e-14!66;CL:0000034!1.42e-13!97;CL:0000144!1.88e-10!121;CL:0000012!1.88e-10!121;CL:0000723!1.81e-09!91;CL:0000048!1.81e-09!91;CL:0000548!4.68e-07!115;CL:0000004!4.68e-07!115;CL:0000255!4.68e-07!115;CL:0000815!7.38e-07!1;CL:0000792!7.38e-07!1;CL:0002371!8.02e-07!118;CL:0000625!8.36e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000624,3.17e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000893,1.19e-45,6;CL:0002489,1.19e-45,6;CL:0000898,1.19e-45,6;CL:0000809,1.19e-45,6;CL:0000810,1.19e-45,6;CL:0000895,1.19e-45,6;CL:0000808,1.19e-45,6;CL:0000894,1.19e-45,6;CL:0000806,1.19e-45,6;CL:0000807,1.19e-45,6;CL:0000805,1.19e-45,6;CL:0002425,1.19e-45,6;CL:0002436,1.19e-45,6;CL:0002427,1.19e-45,6;CL:0002428,1.19e-45,6;CL:0002429,1.19e-45,6;CL:0002433,1.19e-45,6;CL:0002431,1.19e-45,6;CL:0002432,1.19e-45,6;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,2.01e-12,1;CL:0000792,2.01e-12,1;CL:0000625,2.59e-12,1;CL:0000945,7.11e-12,1;CL:0000236,7.11e-12,1;CL:0000826,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.19e-20!46;UBERON:0002370!3.92e-08!23;UBERON:0000974!3.92e-08!23;UBERON:0004807!3.92e-08!23;UBERON:0005058!3.92e-08!23;UBERON:0003351!3.92e-08!23;UBERON:0009113!3.92e-08!23;UBERON:0003295!3.92e-08!23;UBERON:0009722!3.92e-08!23;UBERON:0005562!3.92e-08!23;UBERON:0007690!3.92e-08!23;UBERON:0006562!8.96e-08!24;UBERON:0003408!8.96e-08!24;UBERON:0001557!8.96e-08!24;UBERON:0001042!8.96e-08!24;UBERON:0008814!8.96e-08!24;UBERON:0009145!8.96e-08!24;UBERON:0000072!7.40e-07!27 | |ontology_enrichment_uberon=UBERON:0002384!1.19e-20!46;UBERON:0002370!3.92e-08!23;UBERON:0000974!3.92e-08!23;UBERON:0004807!3.92e-08!23;UBERON:0005058!3.92e-08!23;UBERON:0003351!3.92e-08!23;UBERON:0009113!3.92e-08!23;UBERON:0003295!3.92e-08!23;UBERON:0009722!3.92e-08!23;UBERON:0005562!3.92e-08!23;UBERON:0007690!3.92e-08!23;UBERON:0006562!8.96e-08!24;UBERON:0003408!8.96e-08!24;UBERON:0001557!8.96e-08!24;UBERON:0001042!8.96e-08!24;UBERON:0008814!8.96e-08!24;UBERON:0009145!8.96e-08!24;UBERON:0000072!7.40e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,3.56e-12,23;UBERON:0000974,3.56e-12,23;UBERON:0004807,3.56e-12,23;UBERON:0005058,3.56e-12,23;UBERON:0003351,3.56e-12,23;UBERON:0009113,3.56e-12,23;UBERON:0003295,3.56e-12,23;UBERON:0009722,3.56e-12,23;UBERON:0005562,3.56e-12,23;UBERON:0007690,3.56e-12,23;UBERON:0006562,1.12e-11,24;UBERON:0003408,1.12e-11,24;UBERON:0001557,1.12e-11,24;UBERON:0001042,1.12e-11,24;UBERON:0008814,1.12e-11,24;UBERON:0009145,1.12e-11,24;UBERON:0000072,2.10e-10,27;UBERON:0004177,1.06e-09,29;UBERON:0005057,1.06e-09,29;UBERON:0000077,4.57e-08,35;UBERON:0007811,7.59e-08,36;UBERON:0000065,6.64e-07,41;UBERON:0001004,9.64e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,6.58528949552039,9.85521055061667,10.0647746318457,2.22583358693156,0.957265907944037,1.54080656938085,1.74840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,6.58528949552039,9.85521055061667,10.0647746318457,2.22583358693156,0.957265907944037,1.54080656938085,1.74840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:59813443..59813453,+ | |short_description=p@chr10:59813443..59813453,+ | ||
}} | }} |
Latest revision as of 13:00, 4 August 2015
Short description: | p@chr10:59813443..59813453, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59813443..59813453, + |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.33e-15 | 46 |
thymus | 3.56e-12 | 23 |
neck | 3.56e-12 | 23 |
respiratory system epithelium | 3.56e-12 | 23 |
hemolymphoid system gland | 3.56e-12 | 23 |
pharyngeal epithelium | 3.56e-12 | 23 |
thymic region | 3.56e-12 | 23 |
pharyngeal gland | 3.56e-12 | 23 |
entire pharyngeal arch endoderm | 3.56e-12 | 23 |
thymus primordium | 3.56e-12 | 23 |
early pharyngeal endoderm | 3.56e-12 | 23 |
pharynx | 1.12e-11 | 24 |
gland of gut | 1.12e-11 | 24 |
upper respiratory tract | 1.12e-11 | 24 |
chordate pharynx | 1.12e-11 | 24 |
pharyngeal arch system | 1.12e-11 | 24 |
pharyngeal region of foregut | 1.12e-11 | 24 |
segment of respiratory tract | 2.10e-10 | 27 |
hemopoietic organ | 1.06e-09 | 29 |
immune organ | 1.06e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 4.57e-08 | 35 |
craniocervical region | 7.59e-08 | 36 |
respiratory tract | 6.64e-07 | 41 |
respiratory system | 9.64e-07 | 42 |