FFCP PHASE1:Mm9::chr5:35731576..35731581,+: Difference between revisions
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{{FFCP|EntrezGene=15371|HGNC=|MCL_coexpression_id=133|UniProt=O70218|association_with_transcript=69bp_to_ENSMUST00000087674_5end|description=CAGE_peak_4_at_Hmx1_5end|id=chr5:35731576..35731581,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!9.31e-21!9;UBERON:0000019!9.31e-21!9;UBERON:0000047!9.31e-21!9;UBERON:0004088!9.31e-21!9;UBERON:0002104!9.31e-21!9;UBERON:0001456!9.31e-21!9;UBERON:0003072!9.31e-21!9;UBERON:0003071!9.31e-21!9;UBERON:0004128!9.31e-21!9;UBERON:0001444!1.31e-16!11;UBERON:0000020!4.71e-15!12;UBERON:0001032!4.71e-15!12;UBERON:0004456!4.71e-15!12;UBERON:0005085!9.73e-14!13;UBERON:0002369!2.29e-07!7;UBERON:0006858!2.29e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.11e-68,9;UBERON:0000019,2.11e-68,9;UBERON:0000047,2.11e-68,9;UBERON:0010312,2.11e-68,9;UBERON:0004088,2.11e-68,9;UBERON:0002104,2.11e-68,9;UBERON:0001456,2.11e-68,9;UBERON:0003072,2.11e-68,9;UBERON:0004128,2.11e-68,9;UBERON:0003071,2.11e-68,9;UBERON:0001444,5.41e-56,11;UBERON:0000020,2.45e-51,12;UBERON:0001032,2.45e-51,12;UBERON:0004456,2.45e-51,12;UBERON:0000033,2.14e-47,13;UBERON:0005085,2.14e-47,13;UBERON:0007811,4.38e-17,36;UBERON:0000153,2.83e-14,43;UBERON:0003056,1.68e-12,49;UBERON:0002346,1.66e-09,64;UBERON:0003075,1.66e-09,64;UBERON:0007284,1.66e-09,64;UBERON:0010371,2.71e-08,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,1.30120442962704,3.90833577536904,1.44049703844279,2.26057226753573,1.83698547708585,1.5373646434182,1.21812241927647,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0.168956125490778,0,0,0,0.724752362478018,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p4@Hmx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15371 | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O70218 | |||
|association_with_transcript=69bp_to_ENSMUST00000087674_5end | |||
|cluster_id=chr5:35731576..35731581,+ | |||
|description=CAGE_peak_4_at_Hmx1_5end | |||
|id=chr5:35731576..35731581,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!9.31e-21!9;UBERON:0000019!9.31e-21!9;UBERON:0000047!9.31e-21!9;UBERON:0004088!9.31e-21!9;UBERON:0002104!9.31e-21!9;UBERON:0001456!9.31e-21!9;UBERON:0003072!9.31e-21!9;UBERON:0003071!9.31e-21!9;UBERON:0004128!9.31e-21!9;UBERON:0001444!1.31e-16!11;UBERON:0000020!4.71e-15!12;UBERON:0001032!4.71e-15!12;UBERON:0004456!4.71e-15!12;UBERON:0005085!9.73e-14!13;UBERON:0002369!2.29e-07!7;UBERON:0006858!2.29e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.11e-68,9;UBERON:0000019,2.11e-68,9;UBERON:0000047,2.11e-68,9;UBERON:0010312,2.11e-68,9;UBERON:0004088,2.11e-68,9;UBERON:0002104,2.11e-68,9;UBERON:0001456,2.11e-68,9;UBERON:0003072,2.11e-68,9;UBERON:0004128,2.11e-68,9;UBERON:0003071,2.11e-68,9;UBERON:0001444,5.41e-56,11;UBERON:0000020,2.45e-51,12;UBERON:0001032,2.45e-51,12;UBERON:0004456,2.45e-51,12;UBERON:0000033,2.14e-47,13;UBERON:0005085,2.14e-47,13;UBERON:0007811,4.38e-17,36;UBERON:0000153,2.83e-14,43;UBERON:0003056,1.68e-12,49;UBERON:0002346,1.66e-09,64;UBERON:0003075,1.66e-09,64;UBERON:0007284,1.66e-09,64;UBERON:0010371,2.71e-08,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,1.30120442962704,3.90833577536904,1.44049703844279,2.26057226753573,1.83698547708585,1.5373646434182,1.21812241927647,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0.168956125490778,0,0,0,0.724752362478018,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Hmx1 | |||
}} |
Revision as of 08:50, 4 August 2015
Short description: | p4@Hmx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hmx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 69bp_to_ENSMUST00000087674_5end |
EntrezGene: | 15371 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.11e-68 | 9 |
camera-type eye | 2.11e-68 | 9 |
simple eye | 2.11e-68 | 9 |
immature eye | 2.11e-68 | 9 |
ocular region | 2.11e-68 | 9 |
visual system | 2.11e-68 | 9 |
face | 2.11e-68 | 9 |
optic cup | 2.11e-68 | 9 |
optic vesicle | 2.11e-68 | 9 |
eye primordium | 2.11e-68 | 9 |
subdivision of head | 5.41e-56 | 11 |
sense organ | 2.45e-51 | 12 |
sensory system | 2.45e-51 | 12 |
entire sense organ system | 2.45e-51 | 12 |
head | 2.14e-47 | 13 |
ectodermal placode | 2.14e-47 | 13 |
craniocervical region | 4.38e-17 | 36 |
anterior region of body | 2.83e-14 | 43 |
pre-chordal neural plate | 1.68e-12 | 49 |
neurectoderm | 1.66e-09 | 64 |
neural plate | 1.66e-09 | 64 |
presumptive neural plate | 1.66e-09 | 64 |
ecto-epithelium | 2.71e-08 | 73 |