FFCP PHASE1:Mm9::chr11:88066855..88066881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:88066855..88066881,+ | |||
|description=CAGE_peak_at_chr11:88066855..88066881,+ | |description=CAGE_peak_at_chr11:88066855..88066881,+ | ||
|id=chr11:88066855..88066881,+ | |id=chr11:88066855..88066881,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.85e-12!43;CL:0000221!5.49e-12!44;CL:0000133!5.49e-12!44;CL:0000540!8.36e-12!33;CL:0000047!8.36e-12!33;CL:0000031!8.36e-12!33;CL:0000404!8.36e-12!33;CL:0000055!1.40e-09!50;CL:0000393!5.84e-09!39;CL:0000211!5.84e-09!39 | |ontology_enrichment_celltype=CL:0002319!1.85e-12!43;CL:0000221!5.49e-12!44;CL:0000133!5.49e-12!44;CL:0000540!8.36e-12!33;CL:0000047!8.36e-12!33;CL:0000031!8.36e-12!33;CL:0000404!8.36e-12!33;CL:0000055!1.40e-09!50;CL:0000393!5.84e-09!39;CL:0000211!5.84e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.82e-16,3;CL:0000540,2.00e-16,33;CL:0000047,2.00e-16,33;CL:0000031,2.00e-16,33;CL:0000404,2.00e-16,33;CL:0002613,5.59e-15,3;CL:0000393,1.17e-13,39;CL:0000211,1.17e-13,39;CL:0002319,3.07e-12,43;CL:0000221,6.33e-12,44;CL:0000133,6.33e-12,44;CL:0000117,5.64e-10,23;CL:0000337,5.64e-10,23;CL:0000107,1.08e-08,9;CL:0002321,6.85e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.77e-17!102;UBERON:0000924!4.77e-17!102;UBERON:0006601!4.77e-17!102;UBERON:0000073!4.47e-15!75;UBERON:0001016!4.47e-15!75;UBERON:0001017!5.24e-15!73;UBERON:0005743!5.24e-15!73;UBERON:0000033!1.69e-11!63;UBERON:0002346!1.83e-10!71;UBERON:0003075!1.83e-10!71;UBERON:0007284!1.83e-10!71;UBERON:0000970!2.36e-09!9;UBERON:0000019!2.36e-09!9;UBERON:0000047!2.36e-09!9;UBERON:0004088!2.36e-09!9;UBERON:0002104!2.36e-09!9;UBERON:0001456!2.36e-09!9;UBERON:0003072!2.36e-09!9;UBERON:0003071!2.36e-09!9;UBERON:0004128!2.36e-09!9;UBERON:0003056!1.30e-08!49;UBERON:0000020!3.86e-08!12;UBERON:0001032!3.86e-08!12;UBERON:0004456!3.86e-08!12;UBERON:0005085!2.60e-07!13;UBERON:0001444!3.10e-07!11;UBERON:0007811!6.42e-07!86 | |ontology_enrichment_uberon=UBERON:0004121!4.77e-17!102;UBERON:0000924!4.77e-17!102;UBERON:0006601!4.77e-17!102;UBERON:0000073!4.47e-15!75;UBERON:0001016!4.47e-15!75;UBERON:0001017!5.24e-15!73;UBERON:0005743!5.24e-15!73;UBERON:0000033!1.69e-11!63;UBERON:0002346!1.83e-10!71;UBERON:0003075!1.83e-10!71;UBERON:0007284!1.83e-10!71;UBERON:0000970!2.36e-09!9;UBERON:0000019!2.36e-09!9;UBERON:0000047!2.36e-09!9;UBERON:0004088!2.36e-09!9;UBERON:0002104!2.36e-09!9;UBERON:0001456!2.36e-09!9;UBERON:0003072!2.36e-09!9;UBERON:0003071!2.36e-09!9;UBERON:0004128!2.36e-09!9;UBERON:0003056!1.30e-08!49;UBERON:0000020!3.86e-08!12;UBERON:0001032!3.86e-08!12;UBERON:0004456!3.86e-08!12;UBERON:0005085!2.60e-07!13;UBERON:0001444!3.10e-07!11;UBERON:0007811!6.42e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.45e-27,9;UBERON:0000019,9.45e-27,9;UBERON:0000047,9.45e-27,9;UBERON:0010312,9.45e-27,9;UBERON:0004088,9.45e-27,9;UBERON:0002104,9.45e-27,9;UBERON:0001456,9.45e-27,9;UBERON:0003072,9.45e-27,9;UBERON:0004128,9.45e-27,9;UBERON:0003071,9.45e-27,9;UBERON:0001444,8.88e-22,11;UBERON:0000020,6.53e-20,12;UBERON:0001032,6.53e-20,12;UBERON:0004456,6.53e-20,12;UBERON:0000033,2.49e-18,13;UBERON:0005085,2.49e-18,13;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0000369,3.29e-09,5;UBERON:0002435,3.29e-09,5;UBERON:0000204,3.29e-09,5;UBERON:0010082,3.29e-09,5;UBERON:0003056,9.71e-09,49;UBERON:0002410,1.08e-08,9;UBERON:0000013,2.07e-07,3;UBERON:0000010,3.83e-07,11;UBERON:0000011,4.00e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,5.05791152148994,6.34789175126439,5.70448263155561,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,1.53224805702225,0.153606533256243,1.71452174049252,2.10421580285542,1.04182674111352,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.420883711772948,2.21204753036596,6.43725892413724,2.34080768746954,3.61691562805716,1.49680298132921,4.22775276940004,1.59292931751539,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.861693590931196,1.43381278771531,1.11399337041197,0.566153061577665,0.809621403349789,1.16902343164525,2.37172666767914,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.798049746802062,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0,0,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,5.05791152148994,6.34789175126439,5.70448263155561,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,1.53224805702225,0.153606533256243,1.71452174049252,2.10421580285542,1.04182674111352,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.420883711772948,2.21204753036596,6.43725892413724,2.34080768746954,3.61691562805716,1.49680298132921,4.22775276940004,1.59292931751539,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.861693590931196,1.43381278771531,1.11399337041197,0.566153061577665,0.809621403349789,1.16902343164525,2.37172666767914,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.798049746802062,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0,0,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr11:88066855..88066881,+ | |short_description=p@chr11:88066855..88066881,+ | ||
}} | }} |
Latest revision as of 07:18, 4 August 2015
Short description: | p@chr11:88066855..88066881, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:88066855..88066881, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.82e-16 | 3 |
neuron | 2.00e-16 | 33 |
neuronal stem cell | 2.00e-16 | 33 |
neuroblast | 2.00e-16 | 33 |
electrically signaling cell | 2.00e-16 | 33 |
striatum neuron | 5.59e-15 | 3 |
electrically responsive cell | 1.17e-13 | 39 |
electrically active cell | 1.17e-13 | 39 |
neural cell | 3.07e-12 | 43 |
ectodermal cell | 6.33e-12 | 44 |
neurectodermal cell | 6.33e-12 | 44 |
CNS neuron (sensu Vertebrata) | 5.64e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.64e-10 | 23 |
autonomic neuron | 1.08e-08 | 9 |
embryonic cell | 6.85e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
eye | 9.45e-27 | 9 |
camera-type eye | 9.45e-27 | 9 |
simple eye | 9.45e-27 | 9 |
immature eye | 9.45e-27 | 9 |
ocular region | 9.45e-27 | 9 |
visual system | 9.45e-27 | 9 |
face | 9.45e-27 | 9 |
optic cup | 9.45e-27 | 9 |
optic vesicle | 9.45e-27 | 9 |
eye primordium | 9.45e-27 | 9 |
subdivision of head | 8.88e-22 | 11 |
sense organ | 6.53e-20 | 12 |
sensory system | 6.53e-20 | 12 |
entire sense organ system | 6.53e-20 | 12 |
head | 2.49e-18 | 13 |
ectodermal placode | 2.49e-18 | 13 |
ectoderm-derived structure | 1.19e-14 | 95 |
ectoderm | 1.19e-14 | 95 |
presumptive ectoderm | 1.19e-14 | 95 |
corpus striatum | 3.29e-09 | 5 |
striatum | 3.29e-09 | 5 |
ventral part of telencephalon | 3.29e-09 | 5 |
future corpus striatum | 3.29e-09 | 5 |
pre-chordal neural plate | 9.71e-09 | 49 |
autonomic nervous system | 1.08e-08 | 9 |
sympathetic nervous system | 2.07e-07 | 3 |
peripheral nervous system | 3.83e-07 | 11 |
parasympathetic nervous system | 4.00e-07 | 3 |