FFCP PHASE1:Mm9::chr2:152933438..152933445,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=331|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:152933438..152933445,+|id=chr2:152933438..152933445,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.01e-11,9;CL:0002251,1.01e-11,9;CL:0000239,1.75e-08,6;CL:0000677,1.75e-08,6;CL:0000584,1.75e-08,6;CL:0000066,1.94e-07,25;CL:0000075,2.13e-07,7;CL:0002076,2.78e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.43e-09!15;UBERON:0001242!9.46e-07!13;UBERON:0000060!9.46e-07!13;UBERON:0001262!9.46e-07!13;UBERON:0004786!9.46e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.86e-26,15;UBERON:0001962,5.10e-23,2;UBERON:0001961,5.10e-23,2;UBERON:0001744,5.10e-23,2;UBERON:0004923,1.29e-16,24;UBERON:0002465,1.04e-15,3;UBERON:0001242,5.65e-14,13;UBERON:0001262,5.65e-14,13;UBERON:0004786,5.65e-14,13;UBERON:0003199,2.59e-12,1;UBERON:0003350,1.01e-11,9;UBERON:0004808,1.01e-11,9;UBERON:0001277,1.01e-11,9;UBERON:0000485,1.04e-09,11;UBERON:0000160,4.73e-09,31|phase1_expression=0,0,0,0,0,4.70061961353291,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,3.21172993494038,0,2.15380998079537,0.430942465371778,0,0,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.241251699712623,0.119372344003136,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr2:152933438..152933445,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:152933438..152933445,+ | |||
|description=CAGE_peak_at_chr2:152933438..152933445,+ | |||
|id=chr2:152933438..152933445,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.01e-11,9;CL:0002251,1.01e-11,9;CL:0000239,1.75e-08,6;CL:0000677,1.75e-08,6;CL:0000584,1.75e-08,6;CL:0000066,1.94e-07,25;CL:0000075,2.13e-07,7;CL:0002076,2.78e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.43e-09!15;UBERON:0001242!9.46e-07!13;UBERON:0000060!9.46e-07!13;UBERON:0001262!9.46e-07!13;UBERON:0004786!9.46e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.86e-26,15;UBERON:0001962,5.10e-23,2;UBERON:0001961,5.10e-23,2;UBERON:0001744,5.10e-23,2;UBERON:0004923,1.29e-16,24;UBERON:0002465,1.04e-15,3;UBERON:0001242,5.65e-14,13;UBERON:0001262,5.65e-14,13;UBERON:0004786,5.65e-14,13;UBERON:0003199,2.59e-12,1;UBERON:0003350,1.01e-11,9;UBERON:0004808,1.01e-11,9;UBERON:0001277,1.01e-11,9;UBERON:0000485,1.04e-09,11;UBERON:0000160,4.73e-09,31 | |||
|phase1_expression=0,0,0,0,0,4.70061961353291,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,3.21172993494038,0,2.15380998079537,0.430942465371778,0,0,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.241251699712623,0.119372344003136,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr2:152933438..152933445,+ | |||
}} |
Latest revision as of 07:12, 4 August 2015
Short description: | p@chr2:152933438..152933445, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:152933438..152933445, + |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.01e-11 | 9 |
epithelial cell of alimentary canal | 1.01e-11 | 9 |
brush border epithelial cell | 1.75e-08 | 6 |
gut absorptive cell | 1.75e-08 | 6 |
enterocyte | 1.75e-08 | 6 |
epithelial cell | 1.94e-07 | 25 |
columnar/cuboidal epithelial cell | 2.13e-07 | 7 |
endo-epithelial cell | 2.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.86e-26 | 15 |
gut-associated lymphoid tissue | 5.10e-23 | 2 |
mucosa-associated lymphoid tissue | 5.10e-23 | 2 |
lymphoid tissue | 5.10e-23 | 2 |
organ component layer | 1.29e-16 | 24 |
lymphoid system | 1.04e-15 | 3 |
intestinal mucosa | 5.65e-14 | 13 |
wall of intestine | 5.65e-14 | 13 |
gastrointestinal system mucosa | 5.65e-14 | 13 |
egg chamber | 2.59e-12 | 1 |
epithelium of mucosa | 1.01e-11 | 9 |
gastrointestinal system epithelium | 1.01e-11 | 9 |
intestinal epithelium | 1.01e-11 | 9 |
simple columnar epithelium | 1.04e-09 | 11 |
intestine | 4.73e-09 | 31 |