FFCP PHASE1:Mm9::chr16:96583356..96583408,+: Difference between revisions
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{{FFCP|EntrezGene=72058|HGNC=|MCL_coexpression_id=12|UniProt=Q7TSN7,D3YXH0,D3YXH1|association_with_transcript=0bp_to_ENSMUST00000000163,ENSMUST00000081093,ENSMUST00000113795,NM_001177886,NM_001177887,NM_028078,uc008acx.2,uc008acy.2,uc008acz.2,uc008ada.2_5end|description=CAGE_peak_1_at_Igsf5_5end|id=chr16:96583356..96583408,+|ontology_enrichment_celltype=CL:0000066!2.54e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,4.05e-08,25;CL:0000223,1.90e-07,20;CL:0002563,4.35e-07,9;CL:0002251,4.35e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.66e-23!130;UBERON:0000925!2.66e-23!130;UBERON:0006595!2.66e-23!130;UBERON:0001007!2.97e-23!128;UBERON:0001555!2.97e-23!128;UBERON:0007026!2.97e-23!128;UBERON:0004921!6.19e-22!126;UBERON:0004185!6.19e-22!126;UBERON:0000160!3.88e-21!43;UBERON:0005409!9.85e-21!59;UBERON:0005177!4.93e-14!85;UBERON:0009569!4.08e-12!66;UBERON:0000466!5.59e-12!79;UBERON:0000344!2.03e-10!15;UBERON:0002100!5.64e-10!98;UBERON:0001242!3.59e-09!13;UBERON:0000060!3.59e-09!13;UBERON:0001262!3.59e-09!13;UBERON:0004786!3.59e-09!13;UBERON:0005172!3.56e-08!49;UBERON:0005173!3.56e-08!49;UBERON:0002417!3.56e-08!49;UBERON:0000916!3.56e-08!49;UBERON:0002365!3.67e-08!25;UBERON:0002330!3.67e-08!25;UBERON:0000481!5.91e-08!230;UBERON:0009854!9.45e-08!23;UBERON:0009856!9.45e-08!23;UBERON:0000077!2.35e-07!97;UBERON:0002107!3.06e-07!22;UBERON:0007499!3.06e-07!22;UBERON:0006925!3.06e-07!22;UBERON:0009497!3.06e-07!22;UBERON:0000015!3.06e-07!22;UBERON:0002423!3.06e-07!22;UBERON:0006235!3.06e-07!22;UBERON:0008835!3.06e-07!22;UBERON:0003894!3.06e-07!22;UBERON:0004161!3.06e-07!22;UBERON:0008836!3.06e-07!22;UBERON:0006554!5.54e-07!16;UBERON:0002108!6.46e-07!16;UBERON:0001008!6.82e-07!17;UBERON:0003104!9.48e-07!131;UBERON:0009142!9.48e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.01e-21,116;UBERON:0001555,1.01e-21,116;UBERON:0007026,1.01e-21,116;UBERON:0004119,2.71e-21,118;UBERON:0000925,2.71e-21,118;UBERON:0006595,2.71e-21,118;UBERON:0004921,2.42e-20,114;UBERON:0000160,3.02e-20,31;UBERON:0005409,6.90e-19,47;UBERON:0005177,1.04e-15,79;UBERON:0002100,2.46e-12,90;UBERON:0000344,1.13e-11,15;UBERON:0009569,2.88e-11,66;UBERON:0001242,2.99e-10,13;UBERON:0001262,2.99e-10,13;UBERON:0004786,2.99e-10,13;UBERON:0002365,1.54e-08,25;UBERON:0002330,1.54e-08,25;UBERON:0009854,4.55e-08,23;UBERON:0009856,4.55e-08,23;UBERON:0002107,1.69e-07,22;UBERON:0007499,1.69e-07,22;UBERON:0006925,1.69e-07,22;UBERON:0009497,1.69e-07,22;UBERON:0000015,1.69e-07,22;UBERON:0002423,1.69e-07,22;UBERON:0006235,1.69e-07,22;UBERON:0008835,1.69e-07,22;UBERON:0003894,1.69e-07,22;UBERON:0004161,1.69e-07,22;UBERON:0008836,1.69e-07,22;UBERON:0003350,4.35e-07,9;UBERON:0004808,4.35e-07,9;UBERON:0001277,4.35e-07,9;UBERON:0005172,4.78e-07,49;UBERON:0005173,4.78e-07,49;UBERON:0002417,4.78e-07,49;UBERON:0000916,4.78e-07,49;UBERON:0006554,7.88e-07,18;UBERON:0001008,8.81e-07,19;UBERON:0002113,9.90e-07,14;UBERON:0003918,9.90e-07,14;UBERON:0011143,9.90e-07,14;UBERON:0005095,9.90e-07,14;UBERON:0007687,9.90e-07,14|phase1_expression=0.160148847104794,182.863113603025,160.614731504506,164.540530950916,163.792903692456,70.6771734749056,73.8215944281861,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5629220976458,0,0,85.9159310400594,93.140168113271,153.894166382825,113.290404989837,121.09483276947,125.22543342175,99.8039313849326,121.286589328452,0,0,0,31.4848265528889,26.9300125480758,31.0337421518801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0,0,8.69593466105033,29.2544118173671,51.677821361789,46.9541776724901,44.8345728038892,37.1862316290789,25.4204400438471,0,0,0,0.14084341977668,0,0,0,22.2985772241551,23.5624674891842,20.7265022456061,53.323871828801,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,1.05829836422134,0,34.6072954828123,0.144599356919912,0,0.161766849947409,0,0,70.8288692628864,1.17112318804619,1.25668024088073,107.802877298026,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,4.9901288286655,15.4264643556515,70.5096496029952,10.9429765060966,0,0,0,0.150704817835715,0,0,0,4.39795730256327,0,0.189106080167819,0,0,0.278047249225598,0,0,2.7864797354589,0,0,0,0,0,0,0,0,0,0.232533944750408,0.804820204198858,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,248.144506020832,108.689182898717,1.49301775374664,3.94802342162745,15.206360436007,36.3030344322017,52.9259744350791,61.8233284865817,87.3133473241901,101.619255064715,78.9192555632846,80.3784147046249,77.0108144120525,98.8701349519644,92.9393614461185,98.9732128074205,6.06937283049861,10.0538691096561,20.2873924211545,20.9760867680674,27.9291581521381,37.5927994612107,48.5656605114296,74.8383450256583,82.2673333888804,84.2802629585898,42.3927256734623,1.00107063429656,0.982794975566015,2.02375901146368,2.84004169943904,3.13530307678142,7.89340140522401,14.0971107350897,31.2920987675818,37.3403521935791,43.1304619582064,58.7982697316235,49.3019523521006,43.4435670069032,48.4373016509163,35.2183770595258,25.6806934331581,1.32643988239339,2.93336957595647,4.92260748748046,11.0304416695596,14.0705256251125,17.139142143793,24.1965723343671,17.1822307075748,18.6030339304971,11.9591076493115,24.0879072632135,22.2763626607005,40.7910345199863,0,0,19.1788066477424,19.591508987636,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,10.6455063906201,1.24645922567079,2.28041743095006,19.7964147567043,38.4960901185892,5.82673526771955,9.06970670894253,23.3870298897314,16.832207894204,17.8312385807478,41.0900986137472,20.7214225802178,17.4683715408513,26.5470876666085,36.8965130012496,21.6584640821192,0,0,0,0,0,0,0,0,0.704015124191131,1.27099242518292,61.7479514553893,0,0,0,0,0.328281799490123,90.0675785186239,0.556275906031529,0,1.03193433981611,0.370389054739423,0.188368457004691,0,0,0,0,0,42.9601778106801,1.73984796469624,12.1991680276109,21.9250841868257,25.0905955217362,29.9156712332263,21.9828884607258,26.8623731107342,36.1223199937961,79.453978627869,47.8431271076933,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.821500670520278,1.5624526181274,0,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,2.72076460338254,0,0,0,37.2855916482128,20.4573898241788,25.2749241488826,2.78678892802786,69.7185224609155,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0.341467211508268,1.94485373654635,0.419226325255965,1.65459157605013,5.55616819504038,6.38708677440572,8.3438994493872,6.82282471762253,8.36481689637791,5.28153755881013,6.64854703036165,6.6586158501064,6.20303064720623,5.23923060411381,5.79421629724277,4.43691207066522,4.94503080963968,5.2991611248383,7.88599280486455,6.56660482789549,6.91464950847231,6.1045494985578,7.15231291156513,7.1922416707925,6.0366231048015,7.62902163169744,7.19761803383067,3.36685362994643,5.93175090620871,4.62971067165148,10.6400071224119,7.7468420592983,4.05103883060397,0.499621155875892,5.6143586026898,9.88406848622172,0.191288332068843,0.882365676478062,0|short_description=p1@Igsf5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72058 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TSN7,uniprot:D3YXH0,uniprot:D3YXH1 | |||
|association_with_transcript=0bp_to_ENSMUST00000000163,ENSMUST00000081093,ENSMUST00000113795,NM_001177886,NM_001177887,NM_028078,uc008acx.2,uc008acy.2,uc008acz.2,uc008ada.2_5end | |||
|cluster_id=chr16:96583356..96583408,+ | |||
|description=CAGE_peak_1_at_Igsf5_5end | |||
|id=chr16:96583356..96583408,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.54e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.05e-08,25;CL:0000223,1.90e-07,20;CL:0002563,4.35e-07,9;CL:0002251,4.35e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.66e-23!130;UBERON:0000925!2.66e-23!130;UBERON:0006595!2.66e-23!130;UBERON:0001007!2.97e-23!128;UBERON:0001555!2.97e-23!128;UBERON:0007026!2.97e-23!128;UBERON:0004921!6.19e-22!126;UBERON:0004185!6.19e-22!126;UBERON:0000160!3.88e-21!43;UBERON:0005409!9.85e-21!59;UBERON:0005177!4.93e-14!85;UBERON:0009569!4.08e-12!66;UBERON:0000466!5.59e-12!79;UBERON:0000344!2.03e-10!15;UBERON:0002100!5.64e-10!98;UBERON:0001242!3.59e-09!13;UBERON:0000060!3.59e-09!13;UBERON:0001262!3.59e-09!13;UBERON:0004786!3.59e-09!13;UBERON:0005172!3.56e-08!49;UBERON:0005173!3.56e-08!49;UBERON:0002417!3.56e-08!49;UBERON:0000916!3.56e-08!49;UBERON:0002365!3.67e-08!25;UBERON:0002330!3.67e-08!25;UBERON:0000481!5.91e-08!230;UBERON:0009854!9.45e-08!23;UBERON:0009856!9.45e-08!23;UBERON:0000077!2.35e-07!97;UBERON:0002107!3.06e-07!22;UBERON:0007499!3.06e-07!22;UBERON:0006925!3.06e-07!22;UBERON:0009497!3.06e-07!22;UBERON:0000015!3.06e-07!22;UBERON:0002423!3.06e-07!22;UBERON:0006235!3.06e-07!22;UBERON:0008835!3.06e-07!22;UBERON:0003894!3.06e-07!22;UBERON:0004161!3.06e-07!22;UBERON:0008836!3.06e-07!22;UBERON:0006554!5.54e-07!16;UBERON:0002108!6.46e-07!16;UBERON:0001008!6.82e-07!17;UBERON:0003104!9.48e-07!131;UBERON:0009142!9.48e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.01e-21,116;UBERON:0001555,1.01e-21,116;UBERON:0007026,1.01e-21,116;UBERON:0004119,2.71e-21,118;UBERON:0000925,2.71e-21,118;UBERON:0006595,2.71e-21,118;UBERON:0004921,2.42e-20,114;UBERON:0000160,3.02e-20,31;UBERON:0005409,6.90e-19,47;UBERON:0005177,1.04e-15,79;UBERON:0002100,2.46e-12,90;UBERON:0000344,1.13e-11,15;UBERON:0009569,2.88e-11,66;UBERON:0001242,2.99e-10,13;UBERON:0001262,2.99e-10,13;UBERON:0004786,2.99e-10,13;UBERON:0002365,1.54e-08,25;UBERON:0002330,1.54e-08,25;UBERON:0009854,4.55e-08,23;UBERON:0009856,4.55e-08,23;UBERON:0002107,1.69e-07,22;UBERON:0007499,1.69e-07,22;UBERON:0006925,1.69e-07,22;UBERON:0009497,1.69e-07,22;UBERON:0000015,1.69e-07,22;UBERON:0002423,1.69e-07,22;UBERON:0006235,1.69e-07,22;UBERON:0008835,1.69e-07,22;UBERON:0003894,1.69e-07,22;UBERON:0004161,1.69e-07,22;UBERON:0008836,1.69e-07,22;UBERON:0003350,4.35e-07,9;UBERON:0004808,4.35e-07,9;UBERON:0001277,4.35e-07,9;UBERON:0005172,4.78e-07,49;UBERON:0005173,4.78e-07,49;UBERON:0002417,4.78e-07,49;UBERON:0000916,4.78e-07,49;UBERON:0006554,7.88e-07,18;UBERON:0001008,8.81e-07,19;UBERON:0002113,9.90e-07,14;UBERON:0003918,9.90e-07,14;UBERON:0011143,9.90e-07,14;UBERON:0005095,9.90e-07,14;UBERON:0007687,9.90e-07,14 | |||
|phase1_expression=0.160148847104794,182.863113603025,160.614731504506,164.540530950916,163.792903692456,70.6771734749056,73.8215944281861,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5629220976458,0,0,85.9159310400594,93.140168113271,153.894166382825,113.290404989837,121.09483276947,125.22543342175,99.8039313849326,121.286589328452,0,0,0,31.4848265528889,26.9300125480758,31.0337421518801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0,0,8.69593466105033,29.2544118173671,51.677821361789,46.9541776724901,44.8345728038892,37.1862316290789,25.4204400438471,0,0,0,0.14084341977668,0,0,0,22.2985772241551,23.5624674891842,20.7265022456061,53.323871828801,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,1.05829836422134,0,34.6072954828123,0.144599356919912,0,0.161766849947409,0,0,70.8288692628864,1.17112318804619,1.25668024088073,107.802877298026,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,4.9901288286655,15.4264643556515,70.5096496029952,10.9429765060966,0,0,0,0.150704817835715,0,0,0,4.39795730256327,0,0.189106080167819,0,0,0.278047249225598,0,0,2.7864797354589,0,0,0,0,0,0,0,0,0,0.232533944750408,0.804820204198858,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,248.144506020832,108.689182898717,1.49301775374664,3.94802342162745,15.206360436007,36.3030344322017,52.9259744350791,61.8233284865817,87.3133473241901,101.619255064715,78.9192555632846,80.3784147046249,77.0108144120525,98.8701349519644,92.9393614461185,98.9732128074205,6.06937283049861,10.0538691096561,20.2873924211545,20.9760867680674,27.9291581521381,37.5927994612107,48.5656605114296,74.8383450256583,82.2673333888804,84.2802629585898,42.3927256734623,1.00107063429656,0.982794975566015,2.02375901146368,2.84004169943904,3.13530307678142,7.89340140522401,14.0971107350897,31.2920987675818,37.3403521935791,43.1304619582064,58.7982697316235,49.3019523521006,43.4435670069032,48.4373016509163,35.2183770595258,25.6806934331581,1.32643988239339,2.93336957595647,4.92260748748046,11.0304416695596,14.0705256251125,17.139142143793,24.1965723343671,17.1822307075748,18.6030339304971,11.9591076493115,24.0879072632135,22.2763626607005,40.7910345199863,0,0,19.1788066477424,19.591508987636,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,10.6455063906201,1.24645922567079,2.28041743095006,19.7964147567043,38.4960901185892,5.82673526771955,9.06970670894253,23.3870298897314,16.832207894204,17.8312385807478,41.0900986137472,20.7214225802178,17.4683715408513,26.5470876666085,36.8965130012496,21.6584640821192,0,0,0,0,0,0,0,0,0.704015124191131,1.27099242518292,61.7479514553893,0,0,0,0,0.328281799490123,90.0675785186239,0.556275906031529,0,1.03193433981611,0.370389054739423,0.188368457004691,0,0,0,0,0,42.9601778106801,1.73984796469624,12.1991680276109,21.9250841868257,25.0905955217362,29.9156712332263,21.9828884607258,26.8623731107342,36.1223199937961,79.453978627869,47.8431271076933,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.821500670520278,1.5624526181274,0,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,2.72076460338254,0,0,0,37.2855916482128,20.4573898241788,25.2749241488826,2.78678892802786,69.7185224609155,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0.341467211508268,1.94485373654635,0.419226325255965,1.65459157605013,5.55616819504038,6.38708677440572,8.3438994493872,6.82282471762253,8.36481689637791,5.28153755881013,6.64854703036165,6.6586158501064,6.20303064720623,5.23923060411381,5.79421629724277,4.43691207066522,4.94503080963968,5.2991611248383,7.88599280486455,6.56660482789549,6.91464950847231,6.1045494985578,7.15231291156513,7.1922416707925,6.0366231048015,7.62902163169744,7.19761803383067,3.36685362994643,5.93175090620871,4.62971067165148,10.6400071224119,7.7468420592983,4.05103883060397,0.499621155875892,5.6143586026898,9.88406848622172,0.191288332068843,0.882365676478062,0 | |||
|short_description=p1@Igsf5 | |||
}} |
Revision as of 06:39, 4 August 2015
Short description: | p1@Igsf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Igsf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000000163, ENSMUST00000081093, ENSMUST00000113795, NM_001177886, NM_001177887, NM_028078, uc008acx.2, uc008acy.2, uc008acz.2, uc008ada.2_5end |
EntrezGene: | 72058 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.05e-08 | 25 |
endodermal cell | 1.90e-07 | 20 |
intestinal epithelial cell | 4.35e-07 | 9 |
epithelial cell of alimentary canal | 4.35e-07 | 9 |