FFCP PHASE1:Mm9::chr11:8564046..8564067,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:8564046..8564067,- | |||
|description=CAGE_peak_at_chr11:8564046..8564067,- | |description=CAGE_peak_at_chr11:8564046..8564067,- | ||
|id=chr11:8564046..8564067,- | |id=chr11:8564046..8564067,- | ||
|ontology_enrichment_celltype=CL:0002563!2.21e-07!9;CL:0002251!2.21e-07!9 | |ontology_enrichment_celltype=CL:0002563!2.21e-07!9;CL:0002251!2.21e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.55e-14,9;CL:0002251,8.55e-14,9;CL:0000239,2.66e-10,6;CL:0000677,2.66e-10,6;CL:0000584,2.66e-10,6;CL:0000066,2.03e-09,25;CL:0002076,5.27e-09,15;CL:0000075,1.17e-08,7;CL:0000223,2.99e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.07e-23!59;UBERON:0000160!3.59e-20!43;UBERON:0001007!2.53e-13!128;UBERON:0001555!2.53e-13!128;UBERON:0007026!2.53e-13!128;UBERON:0004119!2.88e-13!130;UBERON:0000925!2.88e-13!130;UBERON:0006595!2.88e-13!130;UBERON:0004921!3.20e-12!126;UBERON:0004185!3.20e-12!126;UBERON:0000344!3.14e-11!15;UBERON:0001242!9.46e-10!13;UBERON:0000060!9.46e-10!13;UBERON:0001262!9.46e-10!13;UBERON:0004786!9.46e-10!13;UBERON:0004923!2.73e-08!24;UBERON:0003350!2.21e-07!9;UBERON:0004808!2.21e-07!9;UBERON:0001277!2.21e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!3.07e-23!59;UBERON:0000160!3.59e-20!43;UBERON:0001007!2.53e-13!128;UBERON:0001555!2.53e-13!128;UBERON:0007026!2.53e-13!128;UBERON:0004119!2.88e-13!130;UBERON:0000925!2.88e-13!130;UBERON:0006595!2.88e-13!130;UBERON:0004921!3.20e-12!126;UBERON:0004185!3.20e-12!126;UBERON:0000344!3.14e-11!15;UBERON:0001242!9.46e-10!13;UBERON:0000060!9.46e-10!13;UBERON:0001262!9.46e-10!13;UBERON:0004786!9.46e-10!13;UBERON:0004923!2.73e-08!24;UBERON:0003350!2.21e-07!9;UBERON:0004808!2.21e-07!9;UBERON:0001277!2.21e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.77e-40,47;UBERON:0000160,1.52e-36,31;UBERON:0000344,7.14e-22,15;UBERON:0001242,9.25e-19,13;UBERON:0001262,9.25e-19,13;UBERON:0004786,9.25e-19,13;UBERON:0004923,2.09e-15,24;UBERON:0001007,4.90e-15,116;UBERON:0001555,4.90e-15,116;UBERON:0007026,4.90e-15,116;UBERON:0004119,1.42e-14,118;UBERON:0000925,1.42e-14,118;UBERON:0006595,1.42e-14,118;UBERON:0003350,8.55e-14,9;UBERON:0004808,8.55e-14,9;UBERON:0001277,8.55e-14,9;UBERON:0004921,2.86e-13,114;UBERON:0000485,7.32e-11,11 | |||
|phase1_expression=0,10.1202868215415,11.3749809847384,6.35174843744343,4.50806156951712,6.21153306073992,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0.297872853602656,0,8.95957567643077,8.25873411841812,10.9104073181854,5.1691439539089,6.89507944594845,3.42042155021473,2.77233142735924,3.99114919179548,0,0,0,4.62162591602039,2.1610503896604,3.67504841272264,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,2.2497492932035,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0,0.869593466105033,2.58127163094416,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,2.54805239706646,0,0.432982082022428,0,0.505524445014783,2.05530983494308,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,2.96633961281249,0.144599356919912,0,0,0.883366073841574,0,9.31958806090611,0,0,4.85368404896324,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0.162241263067758,0.712875546952214,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.210289948564127,0,5.61711931072457,1.58670339998127,0.639864751605702,0.928946687441754,2.19074684247559,2.01683524623343,2.89091456998331,3.04361001780095,6.16887780007865,2.63518327558417,4.27269854960458,3.58121649674071,4.28920991662064,5.39291645192533,7.3486936957396,5.57595565112228,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,1.35766741017338,1.05203729835478,3.16182685621286,3.69025369949005,3.767969468193,2.09775178667061,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.549122826376163,0,1.11642284300551,0,0.757736633841335,0.538192240565737,0,0.184753190166605,0.568474235311454,0.651859905768103,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.659880491890142,1.32745138339963,0.485561272309963,0,1.13163047853539,0.590603785761546,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,4.08073171281791,0.18542530201051,0.341741761595705,1.44470807574256,0.370389054739423,0,0,0,0,0,0,5.72802370809068,0.949007980743406,1.21991680276109,1.08005340821801,2.09088296014469,1.52853794622324,1.34864346384821,1.48776220305605,3.14107130380836,3.11075935900303,0,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,1.18269287843545,0.58678619322877,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,0.179427713218951,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0,0.962757628775446,0.758091635291392,0,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.25384382367503,0,0,0.543216455383447,1.12228454331548,0,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,0,0.935726433781634,0.644613162144895,0,0,0 | |phase1_expression=0,10.1202868215415,11.3749809847384,6.35174843744343,4.50806156951712,6.21153306073992,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0.297872853602656,0,8.95957567643077,8.25873411841812,10.9104073181854,5.1691439539089,6.89507944594845,3.42042155021473,2.77233142735924,3.99114919179548,0,0,0,4.62162591602039,2.1610503896604,3.67504841272264,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,2.2497492932035,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0,0.869593466105033,2.58127163094416,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,2.54805239706646,0,0.432982082022428,0,0.505524445014783,2.05530983494308,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,2.96633961281249,0.144599356919912,0,0,0.883366073841574,0,9.31958806090611,0,0,4.85368404896324,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0.162241263067758,0.712875546952214,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.210289948564127,0,5.61711931072457,1.58670339998127,0.639864751605702,0.928946687441754,2.19074684247559,2.01683524623343,2.89091456998331,3.04361001780095,6.16887780007865,2.63518327558417,4.27269854960458,3.58121649674071,4.28920991662064,5.39291645192533,7.3486936957396,5.57595565112228,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,1.35766741017338,1.05203729835478,3.16182685621286,3.69025369949005,3.767969468193,2.09775178667061,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.549122826376163,0,1.11642284300551,0,0.757736633841335,0.538192240565737,0,0.184753190166605,0.568474235311454,0.651859905768103,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.659880491890142,1.32745138339963,0.485561272309963,0,1.13163047853539,0.590603785761546,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,4.08073171281791,0.18542530201051,0.341741761595705,1.44470807574256,0.370389054739423,0,0,0,0,0,0,5.72802370809068,0.949007980743406,1.21991680276109,1.08005340821801,2.09088296014469,1.52853794622324,1.34864346384821,1.48776220305605,3.14107130380836,3.11075935900303,0,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,1.18269287843545,0.58678619322877,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,0.179427713218951,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0,0.962757628775446,0.758091635291392,0,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.25384382367503,0,0,0.543216455383447,1.12228454331548,0,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,0,0.935726433781634,0.644613162144895,0,0,0 | ||
|short_description=p@chr11:8564046..8564067,- | |short_description=p@chr11:8564046..8564067,- | ||
}} | }} |
Latest revision as of 05:50, 4 August 2015
Short description: | p@chr11:8564046..8564067, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:8564046..8564067, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.55e-14 | 9 |
epithelial cell of alimentary canal | 8.55e-14 | 9 |
brush border epithelial cell | 2.66e-10 | 6 |
gut absorptive cell | 2.66e-10 | 6 |
enterocyte | 2.66e-10 | 6 |
epithelial cell | 2.03e-09 | 25 |
endo-epithelial cell | 5.27e-09 | 15 |
columnar/cuboidal epithelial cell | 1.17e-08 | 7 |
endodermal cell | 2.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.77e-40 | 47 |
intestine | 1.52e-36 | 31 |
mucosa | 7.14e-22 | 15 |
intestinal mucosa | 9.25e-19 | 13 |
wall of intestine | 9.25e-19 | 13 |
gastrointestinal system mucosa | 9.25e-19 | 13 |
organ component layer | 2.09e-15 | 24 |
digestive system | 4.90e-15 | 116 |
digestive tract | 4.90e-15 | 116 |
primitive gut | 4.90e-15 | 116 |
endoderm-derived structure | 1.42e-14 | 118 |
endoderm | 1.42e-14 | 118 |
presumptive endoderm | 1.42e-14 | 118 |
epithelium of mucosa | 8.55e-14 | 9 |
gastrointestinal system epithelium | 8.55e-14 | 9 |
intestinal epithelium | 8.55e-14 | 9 |
subdivision of digestive tract | 2.86e-13 | 114 |
simple columnar epithelium | 7.32e-11 | 11 |