FFCP PHASE1:Mm9::chr10:20866292..20866300,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |MCL_coexpression_id=4 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:20866292..20866300,- | |||
|description=CAGE_peak_at_chr10:20866292..20866300,- | |description=CAGE_peak_at_chr10:20866292..20866300,- | ||
|id=chr10:20866292..20866300,- | |id=chr10:20866292..20866300,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.74e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.46e-15!29;UBERON:0002370!3.21e-12!23;UBERON:0000974!3.21e-12!23;UBERON:0004807!3.21e-12!23;UBERON:0005058!3.21e-12!23;UBERON:0003351!3.21e-12!23;UBERON:0009113!3.21e-12!23;UBERON:0003295!3.21e-12!23;UBERON:0009722!3.21e-12!23;UBERON:0005562!3.21e-12!23;UBERON:0007690!3.21e-12!23;UBERON:0006562!1.51e-11!24;UBERON:0003408!1.51e-11!24;UBERON:0001557!1.51e-11!24;UBERON:0001042!1.51e-11!24;UBERON:0008814!1.51e-11!24;UBERON:0009145!1.51e-11!24;UBERON:0000072!7.85e-10!27;UBERON:0000065!5.30e-09!41;UBERON:0001004!1.13e-08!42;UBERON:0002193!4.40e-08!48;UBERON:0002390!5.26e-08!45;UBERON:0003061!5.26e-08!45;UBERON:0005057!1.75e-07!51;UBERON:0000063!9.67e-07!35 | |ontology_enrichment_uberon=UBERON:0004177!3.46e-15!29;UBERON:0002370!3.21e-12!23;UBERON:0000974!3.21e-12!23;UBERON:0004807!3.21e-12!23;UBERON:0005058!3.21e-12!23;UBERON:0003351!3.21e-12!23;UBERON:0009113!3.21e-12!23;UBERON:0003295!3.21e-12!23;UBERON:0009722!3.21e-12!23;UBERON:0005562!3.21e-12!23;UBERON:0007690!3.21e-12!23;UBERON:0006562!1.51e-11!24;UBERON:0003408!1.51e-11!24;UBERON:0001557!1.51e-11!24;UBERON:0001042!1.51e-11!24;UBERON:0008814!1.51e-11!24;UBERON:0009145!1.51e-11!24;UBERON:0000072!7.85e-10!27;UBERON:0000065!5.30e-09!41;UBERON:0001004!1.13e-08!42;UBERON:0002193!4.40e-08!48;UBERON:0002390!5.26e-08!45;UBERON:0003061!5.26e-08!45;UBERON:0005057!1.75e-07!51;UBERON:0000063!9.67e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.07e-20,23;UBERON:0000974,4.07e-20,23;UBERON:0004807,4.07e-20,23;UBERON:0005058,4.07e-20,23;UBERON:0003351,4.07e-20,23;UBERON:0009113,4.07e-20,23;UBERON:0003295,4.07e-20,23;UBERON:0009722,4.07e-20,23;UBERON:0005562,4.07e-20,23;UBERON:0007690,4.07e-20,23;UBERON:0007811,1.30e-19,36;UBERON:0006562,2.94e-19,24;UBERON:0003408,2.94e-19,24;UBERON:0001557,2.94e-19,24;UBERON:0001042,2.94e-19,24;UBERON:0008814,2.94e-19,24;UBERON:0009145,2.94e-19,24;UBERON:0000072,4.64e-17,27;UBERON:0000153,2.71e-16,43;UBERON:0004177,7.60e-16,29;UBERON:0005057,7.60e-16,29;UBERON:0000077,4.97e-13,35;UBERON:0000065,4.93e-11,41;UBERON:0001004,9.35e-11,42;UBERON:0002390,5.38e-10,45;UBERON:0003061,5.38e-10,45;UBERON:0002193,2.49e-09,48;UBERON:0002405,2.49e-09,48;UBERON:0003929,4.69e-08,55;UBERON:0002368,2.52e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98757366614354,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.753524089178575,1.29269348387523,1.0249097622788,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.683471138605126,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.410843828659309,0.25984164595559,0.179026695667481,0.79472541912506,0.961563596159751,1.47689527174577,1.71642964911851,1.37172251979,2.21817607301049,2.82627854145282,2.11666051608725,3.03879945672079,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98757366614354,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.753524089178575,1.29269348387523,1.0249097622788,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.683471138605126,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.410843828659309,0.25984164595559,0.179026695667481,0.79472541912506,0.961563596159751,1.47689527174577,1.71642964911851,1.37172251979,2.21817607301049,2.82627854145282,2.11666051608725,3.03879945672079,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr10:20866292..20866300,- | |short_description=p@chr10:20866292..20866300,- | ||
}} | }} |
Latest revision as of 05:37, 4 August 2015
Short description: | p@chr10:20866292..20866300, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:20866292..20866300, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.74e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.07e-20 | 23 |
neck | 4.07e-20 | 23 |
respiratory system epithelium | 4.07e-20 | 23 |
hemolymphoid system gland | 4.07e-20 | 23 |
pharyngeal epithelium | 4.07e-20 | 23 |
thymic region | 4.07e-20 | 23 |
pharyngeal gland | 4.07e-20 | 23 |
entire pharyngeal arch endoderm | 4.07e-20 | 23 |
thymus primordium | 4.07e-20 | 23 |
early pharyngeal endoderm | 4.07e-20 | 23 |
craniocervical region | 1.30e-19 | 36 |
pharynx | 2.94e-19 | 24 |
gland of gut | 2.94e-19 | 24 |
upper respiratory tract | 2.94e-19 | 24 |
chordate pharynx | 2.94e-19 | 24 |
pharyngeal arch system | 2.94e-19 | 24 |
pharyngeal region of foregut | 2.94e-19 | 24 |
segment of respiratory tract | 4.64e-17 | 27 |
anterior region of body | 2.71e-16 | 43 |
hemopoietic organ | 7.60e-16 | 29 |
immune organ | 7.60e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 4.97e-13 | 35 |
respiratory tract | 4.93e-11 | 41 |
respiratory system | 9.35e-11 | 42 |
hematopoietic system | 5.38e-10 | 45 |
blood island | 5.38e-10 | 45 |
hemolymphoid system | 2.49e-09 | 48 |
immune system | 2.49e-09 | 48 |
gut epithelium | 4.69e-08 | 55 |
endocrine gland | 2.52e-07 | 60 |