FFCP PHASE1:Mm9::chr8:86423857..86423868,+: Difference between revisions
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{{FFCP|EntrezGene=330814|HGNC=|MCL_coexpression_id=13|UniProt=Q80TR1|association_with_transcript=-128bp_to_NM_181039,uc009mlg.2,uc009mlh.2_5end|description=CAGE_peak_7_at_Lphn1_5end|id=chr8:86423857..86423868,+|ontology_enrichment_celltype=CL:0000117!4.89e-16!23;CL:0000337!4.89e-16!23;CL:0000221!9.92e-13!44;CL:0000133!9.92e-13!44;CL:0002319!1.27e-12!43;CL:0000540!8.50e-12!33;CL:0000047!8.50e-12!33;CL:0000031!8.50e-12!33;CL:0000404!8.50e-12!33;CL:0000055!9.55e-11!50;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-38,23;CL:0000337,1.02e-38,23;CL:0000540,5.79e-25,33;CL:0000047,5.79e-25,33;CL:0000031,5.79e-25,33;CL:0000404,5.79e-25,33;CL:0002319,2.13e-23,43;CL:0000221,1.07e-22,44;CL:0000133,1.07e-22,44;CL:0000393,4.09e-20,39;CL:0000211,4.09e-20,39;CL:0002321,1.05e-12,70;CL:0002609,6.56e-10,6;CL:0002612,7.20e-07,3;CL:0002610,7.86e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.00e-25!73;UBERON:0005743!9.00e-25!73;UBERON:0000073!4.83e-24!75;UBERON:0001016!4.83e-24!75;UBERON:0001049!3.88e-22!52;UBERON:0005068!3.88e-22!52;UBERON:0006241!3.88e-22!52;UBERON:0007135!3.88e-22!52;UBERON:0002346!1.02e-21!71;UBERON:0003075!1.02e-21!71;UBERON:0007284!1.02e-21!71;UBERON:0000955!1.29e-20!50;UBERON:0006238!1.29e-20!50;UBERON:0002616!5.11e-20!49;UBERON:0004121!6.94e-20!102;UBERON:0000924!6.94e-20!102;UBERON:0006601!6.94e-20!102;UBERON:0002020!6.79e-19!34;UBERON:0000033!2.87e-18!63;UBERON:0002780!9.68e-17!39;UBERON:0001890!9.68e-17!39;UBERON:0006240!9.68e-17!39;UBERON:0003080!1.29e-16!40;UBERON:0003056!5.45e-16!49;UBERON:0002791!3.30e-15!29;UBERON:0003528!3.30e-15!29;UBERON:0001893!3.30e-15!29;UBERON:0000153!1.50e-11!94;UBERON:0007811!2.13e-11!86;UBERON:0000956!2.51e-10!21;UBERON:0001869!2.51e-10!21;UBERON:0000203!2.51e-10!21;UBERON:0002619!2.01e-08!17;UBERON:0000025!5.95e-08!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.73e-36,34;UBERON:0001017,1.17e-35,73;UBERON:0001016,1.99e-34,75;UBERON:0000073,1.07e-33,54;UBERON:0001049,3.59e-30,52;UBERON:0005068,3.59e-30,52;UBERON:0006241,3.59e-30,52;UBERON:0007135,3.59e-30,52;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0004121,5.84e-25,95;UBERON:0000924,5.84e-25,95;UBERON:0006601,5.84e-25,95;UBERON:0002780,1.90e-24,39;UBERON:0001890,1.90e-24,39;UBERON:0006240,1.90e-24,39;UBERON:0003080,1.17e-23,40;UBERON:0002346,7.42e-23,64;UBERON:0003075,7.42e-23,64;UBERON:0007284,7.42e-23,64;UBERON:0000955,1.71e-22,47;UBERON:0006238,1.71e-22,47;UBERON:0002616,2.78e-21,46;UBERON:0010371,5.86e-19,73;UBERON:0003056,5.11e-18,49;UBERON:0000956,1.33e-15,21;UBERON:0001869,1.33e-15,21;UBERON:0000203,1.33e-15,21;UBERON:0002420,1.53e-13,8;UBERON:0007245,1.53e-13,8;UBERON:0010009,1.53e-13,8;UBERON:0010011,1.53e-13,8;UBERON:0000454,1.53e-13,8;UBERON:0010314,2.89e-13,92;UBERON:0002619,5.82e-13,17;UBERON:0002240,8.94e-12,6;UBERON:0005174,8.94e-12,6;UBERON:0001137,8.94e-12,6;UBERON:0002021,9.64e-11,10;UBERON:0000411,9.64e-11,10;UBERON:0001950,9.64e-11,10;UBERON:0000025,1.20e-10,114;UBERON:0001948,1.62e-10,5;UBERON:0002315,1.62e-10,5;UBERON:0004111,2.21e-09,122;UBERON:0000369,8.06e-09,5;UBERON:0002435,8.06e-09,5;UBERON:0000204,8.06e-09,5;UBERON:0010082,8.06e-09,5;UBERON:0011216,8.59e-09,194;UBERON:0003076,6.17e-07,12;UBERON:0003057,6.17e-07,12;UBERON:0002257,7.20e-07,3;UBERON:0004684,7.86e-07,3;UBERON:0002275,7.86e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0.782391344348039,0.218025156380447,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,2.11596391708813,6.33831403506179,0.338844532069132,0,0,0,0,2.39680088414724,3.45796474789399,1.14058573539325,1.4850653216486,1.47227472945967,4.57041575046086,4.41737081903227,1.71487118900936,1.82106394934649,2.75765635983006,3.30347642998166,2.55374676170375,4.91540906419979,1.97829431595291,3.20206752608434,1.04182674111352,1.95428099300967,1.68828783009504,3.97275444219706,5.89257170947335,4.6982654663704,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,1.37250180845588,3.26701315493447,0.869121600961382,1.02286182932132,1.66230435647648,1.62241263067758,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.655912071918102,0.776110112217047,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330814 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80TR1 | |||
|association_with_transcript=-128bp_to_NM_181039,uc009mlg.2,uc009mlh.2_5end | |||
|cluster_id=chr8:86423857..86423868,+ | |||
|description=CAGE_peak_7_at_Lphn1_5end | |||
|id=chr8:86423857..86423868,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.89e-16!23;CL:0000337!4.89e-16!23;CL:0000221!9.92e-13!44;CL:0000133!9.92e-13!44;CL:0002319!1.27e-12!43;CL:0000540!8.50e-12!33;CL:0000047!8.50e-12!33;CL:0000031!8.50e-12!33;CL:0000404!8.50e-12!33;CL:0000055!9.55e-11!50;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-38,23;CL:0000337,1.02e-38,23;CL:0000540,5.79e-25,33;CL:0000047,5.79e-25,33;CL:0000031,5.79e-25,33;CL:0000404,5.79e-25,33;CL:0002319,2.13e-23,43;CL:0000221,1.07e-22,44;CL:0000133,1.07e-22,44;CL:0000393,4.09e-20,39;CL:0000211,4.09e-20,39;CL:0002321,1.05e-12,70;CL:0002609,6.56e-10,6;CL:0002612,7.20e-07,3;CL:0002610,7.86e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.00e-25!73;UBERON:0005743!9.00e-25!73;UBERON:0000073!4.83e-24!75;UBERON:0001016!4.83e-24!75;UBERON:0001049!3.88e-22!52;UBERON:0005068!3.88e-22!52;UBERON:0006241!3.88e-22!52;UBERON:0007135!3.88e-22!52;UBERON:0002346!1.02e-21!71;UBERON:0003075!1.02e-21!71;UBERON:0007284!1.02e-21!71;UBERON:0000955!1.29e-20!50;UBERON:0006238!1.29e-20!50;UBERON:0002616!5.11e-20!49;UBERON:0004121!6.94e-20!102;UBERON:0000924!6.94e-20!102;UBERON:0006601!6.94e-20!102;UBERON:0002020!6.79e-19!34;UBERON:0000033!2.87e-18!63;UBERON:0002780!9.68e-17!39;UBERON:0001890!9.68e-17!39;UBERON:0006240!9.68e-17!39;UBERON:0003080!1.29e-16!40;UBERON:0003056!5.45e-16!49;UBERON:0002791!3.30e-15!29;UBERON:0003528!3.30e-15!29;UBERON:0001893!3.30e-15!29;UBERON:0000153!1.50e-11!94;UBERON:0007811!2.13e-11!86;UBERON:0000956!2.51e-10!21;UBERON:0001869!2.51e-10!21;UBERON:0000203!2.51e-10!21;UBERON:0002619!2.01e-08!17;UBERON:0000025!5.95e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.73e-36,34;UBERON:0001017,1.17e-35,73;UBERON:0001016,1.99e-34,75;UBERON:0000073,1.07e-33,54;UBERON:0001049,3.59e-30,52;UBERON:0005068,3.59e-30,52;UBERON:0006241,3.59e-30,52;UBERON:0007135,3.59e-30,52;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0004121,5.84e-25,95;UBERON:0000924,5.84e-25,95;UBERON:0006601,5.84e-25,95;UBERON:0002780,1.90e-24,39;UBERON:0001890,1.90e-24,39;UBERON:0006240,1.90e-24,39;UBERON:0003080,1.17e-23,40;UBERON:0002346,7.42e-23,64;UBERON:0003075,7.42e-23,64;UBERON:0007284,7.42e-23,64;UBERON:0000955,1.71e-22,47;UBERON:0006238,1.71e-22,47;UBERON:0002616,2.78e-21,46;UBERON:0010371,5.86e-19,73;UBERON:0003056,5.11e-18,49;UBERON:0000956,1.33e-15,21;UBERON:0001869,1.33e-15,21;UBERON:0000203,1.33e-15,21;UBERON:0002420,1.53e-13,8;UBERON:0007245,1.53e-13,8;UBERON:0010009,1.53e-13,8;UBERON:0010011,1.53e-13,8;UBERON:0000454,1.53e-13,8;UBERON:0010314,2.89e-13,92;UBERON:0002619,5.82e-13,17;UBERON:0002240,8.94e-12,6;UBERON:0005174,8.94e-12,6;UBERON:0001137,8.94e-12,6;UBERON:0002021,9.64e-11,10;UBERON:0000411,9.64e-11,10;UBERON:0001950,9.64e-11,10;UBERON:0000025,1.20e-10,114;UBERON:0001948,1.62e-10,5;UBERON:0002315,1.62e-10,5;UBERON:0004111,2.21e-09,122;UBERON:0000369,8.06e-09,5;UBERON:0002435,8.06e-09,5;UBERON:0000204,8.06e-09,5;UBERON:0010082,8.06e-09,5;UBERON:0011216,8.59e-09,194;UBERON:0003076,6.17e-07,12;UBERON:0003057,6.17e-07,12;UBERON:0002257,7.20e-07,3;UBERON:0004684,7.86e-07,3;UBERON:0002275,7.86e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0.782391344348039,0.218025156380447,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,2.11596391708813,6.33831403506179,0.338844532069132,0,0,0,0,2.39680088414724,3.45796474789399,1.14058573539325,1.4850653216486,1.47227472945967,4.57041575046086,4.41737081903227,1.71487118900936,1.82106394934649,2.75765635983006,3.30347642998166,2.55374676170375,4.91540906419979,1.97829431595291,3.20206752608434,1.04182674111352,1.95428099300967,1.68828783009504,3.97275444219706,5.89257170947335,4.6982654663704,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,1.37250180845588,3.26701315493447,0.869121600961382,1.02286182932132,1.66230435647648,1.62241263067758,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.655912071918102,0.776110112217047,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0,0,0.630869845692382,0.720332286654991,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0.296452627087149,0.667380422864376,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,1.19021820443007,0.780534591431195,0,0.221464689648775,0.956728611944923,0,0,1.01254341007058,0,0,0,0,0.642202359951168,1.05490517932983,0.491804836130026,0.504941854408746,0,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.60660658210904,0.567760340833074,0.35613120733451,0.81443479676788,0,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.214337035031592,0.532020700926821,0.178368817602071,1.15184314421485,0.608929898229199,0,0,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.324016022465404,0.209088296014469,0,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0.56369293868419,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,1.01373675294467,1.64300134104056,1.69265700297135,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0.538283139656854,0.335769232728157,0.19318959403219,0,1.09890974560359,0,0,1.6942555278512,2.30162618253588,0,3.43706364687375,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,3.17199686288943,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,1.21553358534147,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.832326981263301,0.459483751644906,0,0.347652977834566,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.953744759789284,0,0.282328141245992,0.507687647350059,0,0,0.543216455383447,0,0.355905054372522,0.29551344712669,0,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0,0 | |||
|short_description=p7@Lphn1 | |||
}} |
Revision as of 05:05, 4 August 2015
Short description: | p7@Lphn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lphn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -128bp_to_NM_181039, uc009mlg.2, uc009mlh.2_5end |
EntrezGene: | 330814 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-38 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-38 | 23 |
neuron | 5.79e-25 | 33 |
neuronal stem cell | 5.79e-25 | 33 |
neuroblast | 5.79e-25 | 33 |
electrically signaling cell | 5.79e-25 | 33 |
neural cell | 2.13e-23 | 43 |
ectodermal cell | 1.07e-22 | 44 |
neurectodermal cell | 1.07e-22 | 44 |
electrically responsive cell | 4.09e-20 | 39 |
electrically active cell | 4.09e-20 | 39 |
embryonic cell | 1.05e-12 | 70 |
neuron of cerebral cortex | 6.56e-10 | 6 |
neuron of the ventral spinal cord | 7.20e-07 | 3 |
raphe nuclei neuron | 7.86e-07 | 3 |