FFCP PHASE1:Mm9::chr2:14096140..14096173,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=625286|HGNC=|MCL_coexpression_id=12|UniProt=A2ARJ3|association_with_transcript=0bp_to_ENSMUST00000077517,NM_001081310,uc008ikj.1_5end|description=CAGE_peak_1_at_Fam23a_5end|id=chr2:14096140..14096173,+|ontology_enrichment_celltype=CL:0002563!1.44e-10!9;CL:0002251!1.44e-10!9;CL:0000239!6.14e-08!6;CL:0000677!6.14e-08!6;CL:0000212!6.14e-08!6;CL:0000584!6.14e-08!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.50e-13,9;CL:0002251,6.50e-13,9;CL:0000239,1.33e-09,6;CL:0000677,1.33e-09,6;CL:0000584,1.33e-09,6;CL:0000075,4.49e-08,7;CL:0002076,6.83e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.56e-20!43;UBERON:0005409!1.63e-19!59;UBERON:0000344!7.58e-18!15;UBERON:0001242!1.94e-15!13;UBERON:0000060!1.94e-15!13;UBERON:0001262!1.94e-15!13;UBERON:0004786!1.94e-15!13;UBERON:0003350!1.44e-10!9;UBERON:0004808!1.44e-10!9;UBERON:0001277!1.44e-10!9;UBERON:0004923!3.26e-09!24;UBERON:0000485!3.54e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.83e-38,31;UBERON:0005409,3.31e-27,47;UBERON:0000344,4.25e-22,15;UBERON:0001242,4.67e-19,13;UBERON:0001262,4.67e-19,13;UBERON:0004786,4.67e-19,13;UBERON:0003350,6.50e-13,9;UBERON:0004808,6.50e-13,9;UBERON:0001277,6.50e-13,9;UBERON:0004923,4.36e-12,24;UBERON:0000485,3.65e-10,11;UBERON:0002108,2.00e-07,4;UBERON:0001007,5.25e-07,116;UBERON:0001555,5.25e-07,116;UBERON:0007026,5.25e-07,116;UBERON:0004119,9.71e-07,118;UBERON:0000925,9.71e-07,118;UBERON:0006595,9.71e-07,118|phase1_expression=0,110.625204221677,103.284827341425,166.96024464137,135.74274281546,27.5322005935499,28.7343547932497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,140.473347212611,151.639534785399,84.412098724908,77.9679213047925,71.9673917170869,266.412834077836,205.656585884103,95.7875806030916,0,0,0,16.4645423258227,15.9585259544153,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88177658645584,0,0,0,0,0,0,0,0,0,0,37.4523125478517,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,63.3731988141615,0,0,158.638831284535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,281.84722188518,125.34956859852,0,0,10.4382643670896,36.7064014814483,32.9119504890408,39.1864789791872,111.039800401416,33.1044898995262,35.9409348584385,38.9954685200656,31.7791462004166,129.429994846208,142.002698767674,157.919029690713,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20227903603731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,87.4442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,2.48412283890143,0.627264888043406,1.31017538247707,0.269728692769641,0.495920734352016,0,59.8821176608083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.888986911206461,1.44224540067226,2.56735367673452,1.51618327058278,4.05566879824384,1.32038438970253,1.68554713445788,1.40855335290712,1.26358031702349,1.42888107384922,2.31768651889711,2.12200142510076,1.23625770240992,2.06078488188156,2.05721551431249,1.24233064311536,0.476872379894642,2.61623549938191,1.69396884747595,1.86152137361688,1.46342378298218,0.263069711437843,1.90125759384206,0.561142271657738,2.37270036248348,1.0835493061312,1.22769312950907,1.39443157067369,0.964533054905707,0,1.16965804222704,1.28922632428979,0,0.220591419119515,0|short_description=p1@Fam23a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:625286 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ARJ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000077517,NM_001081310,uc008ikj.1_5end | |||
|cluster_id=chr2:14096140..14096173,+ | |||
|description=CAGE_peak_1_at_Fam23a_5end | |||
|id=chr2:14096140..14096173,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.44e-10!9;CL:0002251!1.44e-10!9;CL:0000239!6.14e-08!6;CL:0000677!6.14e-08!6;CL:0000212!6.14e-08!6;CL:0000584!6.14e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.50e-13,9;CL:0002251,6.50e-13,9;CL:0000239,1.33e-09,6;CL:0000677,1.33e-09,6;CL:0000584,1.33e-09,6;CL:0000075,4.49e-08,7;CL:0002076,6.83e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-20!43;UBERON:0005409!1.63e-19!59;UBERON:0000344!7.58e-18!15;UBERON:0001242!1.94e-15!13;UBERON:0000060!1.94e-15!13;UBERON:0001262!1.94e-15!13;UBERON:0004786!1.94e-15!13;UBERON:0003350!1.44e-10!9;UBERON:0004808!1.44e-10!9;UBERON:0001277!1.44e-10!9;UBERON:0004923!3.26e-09!24;UBERON:0000485!3.54e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.83e-38,31;UBERON:0005409,3.31e-27,47;UBERON:0000344,4.25e-22,15;UBERON:0001242,4.67e-19,13;UBERON:0001262,4.67e-19,13;UBERON:0004786,4.67e-19,13;UBERON:0003350,6.50e-13,9;UBERON:0004808,6.50e-13,9;UBERON:0001277,6.50e-13,9;UBERON:0004923,4.36e-12,24;UBERON:0000485,3.65e-10,11;UBERON:0002108,2.00e-07,4;UBERON:0001007,5.25e-07,116;UBERON:0001555,5.25e-07,116;UBERON:0007026,5.25e-07,116;UBERON:0004119,9.71e-07,118;UBERON:0000925,9.71e-07,118;UBERON:0006595,9.71e-07,118 | |||
|phase1_expression=0,110.625204221677,103.284827341425,166.96024464137,135.74274281546,27.5322005935499,28.7343547932497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,140.473347212611,151.639534785399,84.412098724908,77.9679213047925,71.9673917170869,266.412834077836,205.656585884103,95.7875806030916,0,0,0,16.4645423258227,15.9585259544153,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88177658645584,0,0,0,0,0,0,0,0,0,0,37.4523125478517,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,63.3731988141615,0,0,158.638831284535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,281.84722188518,125.34956859852,0,0,10.4382643670896,36.7064014814483,32.9119504890408,39.1864789791872,111.039800401416,33.1044898995262,35.9409348584385,38.9954685200656,31.7791462004166,129.429994846208,142.002698767674,157.919029690713,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20227903603731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,87.4442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,2.48412283890143,0.627264888043406,1.31017538247707,0.269728692769641,0.495920734352016,0,59.8821176608083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.888986911206461,1.44224540067226,2.56735367673452,1.51618327058278,4.05566879824384,1.32038438970253,1.68554713445788,1.40855335290712,1.26358031702349,1.42888107384922,2.31768651889711,2.12200142510076,1.23625770240992,2.06078488188156,2.05721551431249,1.24233064311536,0.476872379894642,2.61623549938191,1.69396884747595,1.86152137361688,1.46342378298218,0.263069711437843,1.90125759384206,0.561142271657738,2.37270036248348,1.0835493061312,1.22769312950907,1.39443157067369,0.964533054905707,0,1.16965804222704,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p1@Fam23a | |||
}} |
Revision as of 04:17, 4 August 2015
Short description: | p1@Fam23a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam23a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000077517, NM_001081310, uc008ikj.1_5end |
EntrezGene: | 625286 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.50e-13 | 9 |
epithelial cell of alimentary canal | 6.50e-13 | 9 |
brush border epithelial cell | 1.33e-09 | 6 |
gut absorptive cell | 1.33e-09 | 6 |
enterocyte | 1.33e-09 | 6 |
columnar/cuboidal epithelial cell | 4.49e-08 | 7 |
endo-epithelial cell | 6.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.83e-38 | 31 |
gastrointestinal system | 3.31e-27 | 47 |
mucosa | 4.25e-22 | 15 |
intestinal mucosa | 4.67e-19 | 13 |
wall of intestine | 4.67e-19 | 13 |
gastrointestinal system mucosa | 4.67e-19 | 13 |
epithelium of mucosa | 6.50e-13 | 9 |
gastrointestinal system epithelium | 6.50e-13 | 9 |
intestinal epithelium | 6.50e-13 | 9 |
organ component layer | 4.36e-12 | 24 |
simple columnar epithelium | 3.65e-10 | 11 |
small intestine | 2.00e-07 | 4 |
digestive system | 5.25e-07 | 116 |
digestive tract | 5.25e-07 | 116 |
primitive gut | 5.25e-07 | 116 |
endoderm-derived structure | 9.71e-07 | 118 |
endoderm | 9.71e-07 | 118 |
presumptive endoderm | 9.71e-07 | 118 |