FFCP PHASE1:Mm9::chr14:26427283..26427296,+: Difference between revisions
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{{FFCP|EntrezGene=328365|HGNC=|MCL_coexpression_id=13|UniProt=E0CX95|association_with_transcript=-27bp_to_ENSMUST00000160229_5end|description=CAGE_peak_13_at_Zmiz1_5end|id=chr14:26427283..26427296,+|ontology_enrichment_celltype=CL:0000117!1.10e-12!23;CL:0000337!1.10e-12!23;CL:0000540!6.58e-11!33;CL:0000047!6.58e-11!33;CL:0000031!6.58e-11!33;CL:0000404!6.58e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.27e-28,23;CL:0000337,9.27e-28,23;CL:0000540,8.10e-18,33;CL:0000047,8.10e-18,33;CL:0000031,8.10e-18,33;CL:0000404,8.10e-18,33;CL:0000393,2.57e-14,39;CL:0000211,2.57e-14,39;CL:0002319,1.56e-12,43;CL:0000221,3.86e-12,44;CL:0000133,3.86e-12,44;CL:0002609,6.89e-08,6;CL:0002612,2.02e-07,3;CL:0002613,4.29e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.08e-17!34;UBERON:0001017!2.27e-15!73;UBERON:0005743!2.27e-15!73;UBERON:0001049!2.57e-15!52;UBERON:0005068!2.57e-15!52;UBERON:0006241!2.57e-15!52;UBERON:0007135!2.57e-15!52;UBERON:0000073!8.38e-15!75;UBERON:0001016!8.38e-15!75;UBERON:0002346!9.42e-15!71;UBERON:0003075!9.42e-15!71;UBERON:0007284!9.42e-15!71;UBERON:0002791!3.14e-14!29;UBERON:0003528!3.14e-14!29;UBERON:0001893!3.14e-14!29;UBERON:0003056!4.79e-14!49;UBERON:0003080!5.69e-13!40;UBERON:0000153!7.61e-13!94;UBERON:0000955!1.31e-12!50;UBERON:0006238!1.31e-12!50;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0002616!4.78e-12!49;UBERON:0007811!5.14e-12!86;UBERON:0000033!1.01e-11!63;UBERON:0004121!2.06e-11!102;UBERON:0000924!2.06e-11!102;UBERON:0006601!2.06e-11!102;UBERON:0000956!1.58e-09!21;UBERON:0001869!1.58e-09!21;UBERON:0000203!1.58e-09!21;UBERON:0002619!1.93e-07!17;UBERON:0002021!8.62e-07!10;UBERON:0000411!8.62e-07!10;UBERON:0001950!8.62e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.10e-42,34;UBERON:0003528,1.59e-32,29;UBERON:0002791,1.59e-32,29;UBERON:0001893,1.59e-32,29;UBERON:0000073,7.42e-30,54;UBERON:0001049,3.85e-29,52;UBERON:0005068,3.85e-29,52;UBERON:0006241,3.85e-29,52;UBERON:0007135,3.85e-29,52;UBERON:0003080,4.64e-26,40;UBERON:0002346,1.51e-25,64;UBERON:0003075,1.51e-25,64;UBERON:0007284,1.51e-25,64;UBERON:0001017,2.53e-25,73;UBERON:0002780,8.36e-25,39;UBERON:0001890,8.36e-25,39;UBERON:0006240,8.36e-25,39;UBERON:0001016,2.02e-24,75;UBERON:0003056,1.32e-23,49;UBERON:0000955,2.97e-23,47;UBERON:0006238,2.97e-23,47;UBERON:0002616,8.46e-22,46;UBERON:0010371,2.13e-21,73;UBERON:0004121,5.16e-20,95;UBERON:0000924,5.16e-20,95;UBERON:0006601,5.16e-20,95;UBERON:0000956,2.74e-19,21;UBERON:0001869,2.74e-19,21;UBERON:0000203,2.74e-19,21;UBERON:0002619,1.25e-15,17;UBERON:0010314,2.56e-15,92;UBERON:0002420,7.22e-15,8;UBERON:0007245,7.22e-15,8;UBERON:0010009,7.22e-15,8;UBERON:0010011,7.22e-15,8;UBERON:0000454,7.22e-15,8;UBERON:0001948,3.27e-11,5;UBERON:0002315,3.27e-11,5;UBERON:0000369,1.38e-10,5;UBERON:0002435,1.38e-10,5;UBERON:0000204,1.38e-10,5;UBERON:0010082,1.38e-10,5;UBERON:0002021,4.66e-10,10;UBERON:0000411,4.66e-10,10;UBERON:0001950,4.66e-10,10;UBERON:0000025,5.63e-10,114;UBERON:0002240,2.98e-09,6;UBERON:0005174,2.98e-09,6;UBERON:0001137,2.98e-09,6;UBERON:0004111,7.92e-09,122;UBERON:0002257,2.02e-07,3;UBERON:0002950,3.77e-07,4;UBERON:0001891,3.77e-07,4;UBERON:0009616,3.77e-07,4;UBERON:0010286,3.77e-07,4;UBERON:0001954,5.28e-07,7;UBERON:0003022,5.28e-07,7;UBERON:0002421,5.28e-07,7;UBERON:0000349,5.28e-07,7;UBERON:0002600,5.28e-07,7|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.516493293766305,0.84473233291,1.63845168425395,0.171217968225505,0.8774937489487,0.171200729931206,0.699363219351979,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0,0.809265843438391,2.11596391708813,2.53532561402472,0,0,1.3498495759221,0,0,0.599200221036809,0,1.55534418462716,0.810035629990144,1.68259969081106,2.85650984403804,1.98781686856452,1.71487118900936,1.24599112323707,1.83843757322004,0,0.893811366596314,1.38245879930619,2.1101806036831,1.9212405156506,2.6045668527838,1.67509799400829,1.12552522006336,1.22238598221448,2.35702868378934,2.56269025438385,2.79599168737951,0.227178579999552,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.520455980298408,0.304465478312141,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0.510914110417183,0.11981512450592,0,0,1.04853447583376,1.37250180845588,4.90051973240171,2.25971616249959,1.53429274398198,0.83115217823824,1.62241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.229902104433473,0.540186389416048,1.05493372485001,0.74840149066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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328365 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CX95 | |||
|association_with_transcript=-27bp_to_ENSMUST00000160229_5end | |||
|cluster_id=chr14:26427283..26427296,+ | |||
|description=CAGE_peak_13_at_Zmiz1_5end | |||
|id=chr14:26427283..26427296,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.10e-12!23;CL:0000337!1.10e-12!23;CL:0000540!6.58e-11!33;CL:0000047!6.58e-11!33;CL:0000031!6.58e-11!33;CL:0000404!6.58e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.27e-28,23;CL:0000337,9.27e-28,23;CL:0000540,8.10e-18,33;CL:0000047,8.10e-18,33;CL:0000031,8.10e-18,33;CL:0000404,8.10e-18,33;CL:0000393,2.57e-14,39;CL:0000211,2.57e-14,39;CL:0002319,1.56e-12,43;CL:0000221,3.86e-12,44;CL:0000133,3.86e-12,44;CL:0002609,6.89e-08,6;CL:0002612,2.02e-07,3;CL:0002613,4.29e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.08e-17!34;UBERON:0001017!2.27e-15!73;UBERON:0005743!2.27e-15!73;UBERON:0001049!2.57e-15!52;UBERON:0005068!2.57e-15!52;UBERON:0006241!2.57e-15!52;UBERON:0007135!2.57e-15!52;UBERON:0000073!8.38e-15!75;UBERON:0001016!8.38e-15!75;UBERON:0002346!9.42e-15!71;UBERON:0003075!9.42e-15!71;UBERON:0007284!9.42e-15!71;UBERON:0002791!3.14e-14!29;UBERON:0003528!3.14e-14!29;UBERON:0001893!3.14e-14!29;UBERON:0003056!4.79e-14!49;UBERON:0003080!5.69e-13!40;UBERON:0000153!7.61e-13!94;UBERON:0000955!1.31e-12!50;UBERON:0006238!1.31e-12!50;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0002616!4.78e-12!49;UBERON:0007811!5.14e-12!86;UBERON:0000033!1.01e-11!63;UBERON:0004121!2.06e-11!102;UBERON:0000924!2.06e-11!102;UBERON:0006601!2.06e-11!102;UBERON:0000956!1.58e-09!21;UBERON:0001869!1.58e-09!21;UBERON:0000203!1.58e-09!21;UBERON:0002619!1.93e-07!17;UBERON:0002021!8.62e-07!10;UBERON:0000411!8.62e-07!10;UBERON:0001950!8.62e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.10e-42,34;UBERON:0003528,1.59e-32,29;UBERON:0002791,1.59e-32,29;UBERON:0001893,1.59e-32,29;UBERON:0000073,7.42e-30,54;UBERON:0001049,3.85e-29,52;UBERON:0005068,3.85e-29,52;UBERON:0006241,3.85e-29,52;UBERON:0007135,3.85e-29,52;UBERON:0003080,4.64e-26,40;UBERON:0002346,1.51e-25,64;UBERON:0003075,1.51e-25,64;UBERON:0007284,1.51e-25,64;UBERON:0001017,2.53e-25,73;UBERON:0002780,8.36e-25,39;UBERON:0001890,8.36e-25,39;UBERON:0006240,8.36e-25,39;UBERON:0001016,2.02e-24,75;UBERON:0003056,1.32e-23,49;UBERON:0000955,2.97e-23,47;UBERON:0006238,2.97e-23,47;UBERON:0002616,8.46e-22,46;UBERON:0010371,2.13e-21,73;UBERON:0004121,5.16e-20,95;UBERON:0000924,5.16e-20,95;UBERON:0006601,5.16e-20,95;UBERON:0000956,2.74e-19,21;UBERON:0001869,2.74e-19,21;UBERON:0000203,2.74e-19,21;UBERON:0002619,1.25e-15,17;UBERON:0010314,2.56e-15,92;UBERON:0002420,7.22e-15,8;UBERON:0007245,7.22e-15,8;UBERON:0010009,7.22e-15,8;UBERON:0010011,7.22e-15,8;UBERON:0000454,7.22e-15,8;UBERON:0001948,3.27e-11,5;UBERON:0002315,3.27e-11,5;UBERON:0000369,1.38e-10,5;UBERON:0002435,1.38e-10,5;UBERON:0000204,1.38e-10,5;UBERON:0010082,1.38e-10,5;UBERON:0002021,4.66e-10,10;UBERON:0000411,4.66e-10,10;UBERON:0001950,4.66e-10,10;UBERON:0000025,5.63e-10,114;UBERON:0002240,2.98e-09,6;UBERON:0005174,2.98e-09,6;UBERON:0001137,2.98e-09,6;UBERON:0004111,7.92e-09,122;UBERON:0002257,2.02e-07,3;UBERON:0002950,3.77e-07,4;UBERON:0001891,3.77e-07,4;UBERON:0009616,3.77e-07,4;UBERON:0010286,3.77e-07,4;UBERON:0001954,5.28e-07,7;UBERON:0003022,5.28e-07,7;UBERON:0002421,5.28e-07,7;UBERON:0000349,5.28e-07,7;UBERON:0002600,5.28e-07,7 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.516493293766305,0.84473233291,1.63845168425395,0.171217968225505,0.8774937489487,0.171200729931206,0.699363219351979,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0,0.809265843438391,2.11596391708813,2.53532561402472,0,0,1.3498495759221,0,0,0.599200221036809,0,1.55534418462716,0.810035629990144,1.68259969081106,2.85650984403804,1.98781686856452,1.71487118900936,1.24599112323707,1.83843757322004,0,0.893811366596314,1.38245879930619,2.1101806036831,1.9212405156506,2.6045668527838,1.67509799400829,1.12552522006336,1.22238598221448,2.35702868378934,2.56269025438385,2.79599168737951,0.227178579999552,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.520455980298408,0.304465478312141,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0.510914110417183,0.11981512450592,0,0,1.04853447583376,1.37250180845588,4.90051973240171,2.25971616249959,1.53429274398198,0.83115217823824,1.62241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.229902104433473,0.540186389416048,1.05493372485001,0.748401490664606,0.896796041993948,1.21812241927647,0,0.431135985865684,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0.568326998791185,0,0.703578179943289,0.180062061461015,0.473489471170421,0.590292695242212,0.925602677324269,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.164167464079095,0.243206428637567,0,0.658650345873152,0.134206418760372,2.10289948564127,2.16099685996497,0,0.264450566663544,0.213288250535234,0.464473343720877,0.515469845288373,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.379419222745544,0,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,1.14075483509418,0,0.234690248288502,0.167506257441816,0.714130922658041,0.780534591431195,0.315270288212382,0.44292937929755,0.478364305972461,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0.94652465824877,0,0.430846795465598,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,0.876767573733936,0,1.92792789853084,0.425820255624806,0,0,0.329940245945071,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0,0.23467170806371,0.63549621259146,0,0,0,0.422190474497091,0.238744688006273,0.328281799490123,0.291480836629851,0.741701208042039,0.512612642393558,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0.686334519619568,0.169978429993855,0.419854356970974,0,0,0.316335993581135,0.609958401380546,0.324016022465404,0.627264888043406,0.655087691238533,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0,0.352071715937262,0.39061315453185,0.104859344425711,0,0,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,0,0.596044064343795,0.600977247599844,0.590758108698309,0.504832249740738,0.381034033274999,0.403304740547362,0.292373642219257,0.481059208201647,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0,0,0.36630324853453,0,0,5.64751842617067,1.38097570952153,1.71868654031819,2.749650917499,0.685082519770642,0.755393897389701,0.675022500231806,5.40385443869065,4.98456649882625,2.5888015587591,0.207574695168353,0,0.341467211508268,1.21553358534147,0.838452650511929,1.10306105070008,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.655490552289177,1.02440243847791,0.574354689556133,0,0.695305955669133,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.658765662907314,0.423073039458382,0.365855945745545,0,0.543216455383447,0,0.355905054372522,0.788035859004508,0.409231043169689,0.309873682371932,0,0.999242311751784,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Zmiz1 | |||
}} |
Revision as of 04:08, 4 August 2015
Short description: | p13@Zmiz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Zmiz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -27bp_to_ENSMUST00000160229_5end |
EntrezGene: | 328365 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.27e-28 | 23 |
neuroblast (sensu Vertebrata) | 9.27e-28 | 23 |
neuron | 8.10e-18 | 33 |
neuronal stem cell | 8.10e-18 | 33 |
neuroblast | 8.10e-18 | 33 |
electrically signaling cell | 8.10e-18 | 33 |
electrically responsive cell | 2.57e-14 | 39 |
electrically active cell | 2.57e-14 | 39 |
neural cell | 1.56e-12 | 43 |
ectodermal cell | 3.86e-12 | 44 |
neurectodermal cell | 3.86e-12 | 44 |
neuron of cerebral cortex | 6.89e-08 | 6 |
neuron of the ventral spinal cord | 2.02e-07 | 3 |
striatum neuron | 4.29e-07 | 3 |