FFCP PHASE1:Mm9::chr3:88262943..88262965,-: Difference between revisions
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{{FFCP|EntrezGene=20351|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135262_5end|description=CAGE_peak_15_at_Sema4a_5end|id=chr3:88262943..88262965,-|ontology_enrichment_celltype=CL:0000117!9.61e-26!23;CL:0000337!9.61e-26!23;CL:0000540!9.55e-17!33;CL:0000047!9.55e-17!33;CL:0000031!9.55e-17!33;CL:0000404!9.55e-17!33;CL:0000393!6.62e-13!39;CL:0000211!6.62e-13!39;CL:0002319!5.69e-11!43;CL:0000221!1.51e-10!44;CL:0000133!1.51e-10!44;CL:0000055!2.20e-08!50;CL:0002609!4.17e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-38,23;CL:0000337,1.71e-38,23;CL:0000540,2.31e-25,33;CL:0000047,2.31e-25,33;CL:0000031,2.31e-25,33;CL:0000404,2.31e-25,33;CL:0000393,1.01e-20,39;CL:0000211,1.01e-20,39;CL:0002319,2.39e-18,43;CL:0000221,8.03e-18,44;CL:0000133,8.03e-18,44;CL:0002321,1.83e-09,70;CL:0002614,6.40e-09,3;CL:0002613,4.20e-08,3;CL:0000120,1.01e-07,3;CL:0002612,1.06e-07,3;CL:0002610,1.12e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.23e-28!34;UBERON:0001049!1.35e-27!52;UBERON:0005068!1.35e-27!52;UBERON:0006241!1.35e-27!52;UBERON:0007135!1.35e-27!52;UBERON:0001017!9.04e-27!73;UBERON:0005743!9.04e-27!73;UBERON:0000955!1.05e-25!50;UBERON:0006238!1.05e-25!50;UBERON:0000073!1.24e-25!75;UBERON:0001016!1.24e-25!75;UBERON:0002616!1.27e-24!49;UBERON:0000033!1.18e-23!63;UBERON:0002791!9.27e-23!29;UBERON:0003528!9.27e-23!29;UBERON:0001893!9.27e-23!29;UBERON:0002346!4.60e-22!71;UBERON:0003075!4.60e-22!71;UBERON:0007284!4.60e-22!71;UBERON:0003056!1.01e-21!49;UBERON:0003080!2.13e-21!40;UBERON:0002780!1.65e-20!39;UBERON:0001890!1.65e-20!39;UBERON:0006240!1.65e-20!39;UBERON:0004121!3.34e-19!102;UBERON:0000924!3.34e-19!102;UBERON:0006601!3.34e-19!102;UBERON:0000956!1.03e-13!21;UBERON:0001869!1.03e-13!21;UBERON:0000203!1.03e-13!21;UBERON:0007811!1.08e-13!86;UBERON:0000153!4.83e-13!94;UBERON:0002420!1.10e-10!8;UBERON:0007245!1.10e-10!8;UBERON:0010009!1.10e-10!8;UBERON:0010011!1.10e-10!8;UBERON:0000454!1.10e-10!8;UBERON:0002619!3.74e-10!17;UBERON:0002298!9.60e-08!6;UBERON:0002021!1.95e-07!10;UBERON:0000411!1.95e-07!10;UBERON:0001950!1.95e-07!10;UBERON:0002240!1.97e-07!6;UBERON:0005174!1.97e-07!6;UBERON:0001137!1.97e-07!6;UBERON:0000369!5.10e-07!5;UBERON:0002435!5.10e-07!5;UBERON:0000204!5.10e-07!5;UBERON:0010082!5.10e-07!5;UBERON:0000025!6.34e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.00e-44,34;UBERON:0000073,9.77e-43,54;UBERON:0001017,4.97e-39,73;UBERON:0001016,8.45e-38,75;UBERON:0001049,4.25e-36,52;UBERON:0005068,4.25e-36,52;UBERON:0006241,4.25e-36,52;UBERON:0007135,4.25e-36,52;UBERON:0003528,2.20e-33,29;UBERON:0002791,2.20e-33,29;UBERON:0001893,2.20e-33,29;UBERON:0003080,3.22e-30,40;UBERON:0000955,1.20e-29,47;UBERON:0006238,1.20e-29,47;UBERON:0002780,1.37e-28,39;UBERON:0001890,1.37e-28,39;UBERON:0006240,1.37e-28,39;UBERON:0004121,2.46e-28,95;UBERON:0000924,2.46e-28,95;UBERON:0006601,2.46e-28,95;UBERON:0002346,4.34e-28,64;UBERON:0003075,4.34e-28,64;UBERON:0007284,4.34e-28,64;UBERON:0002616,8.07e-28,46;UBERON:0010371,8.31e-24,73;UBERON:0003056,1.26e-23,49;UBERON:0002420,8.86e-20,8;UBERON:0007245,8.86e-20,8;UBERON:0010009,8.86e-20,8;UBERON:0010011,8.86e-20,8;UBERON:0000454,8.86e-20,8;UBERON:0010314,1.63e-17,92;UBERON:0000956,7.51e-17,21;UBERON:0001869,7.51e-17,21;UBERON:0000203,7.51e-17,21;UBERON:0002619,3.21e-15,17;UBERON:0002021,3.39e-14,10;UBERON:0000411,3.39e-14,10;UBERON:0001950,3.39e-14,10;UBERON:0000025,7.61e-13,114;UBERON:0000369,1.81e-12,5;UBERON:0002435,1.81e-12,5;UBERON:0000204,1.81e-12,5;UBERON:0010082,1.81e-12,5;UBERON:0001948,9.20e-12,5;UBERON:0002315,9.20e-12,5;UBERON:0004111,1.45e-11,122;UBERON:0002950,1.45e-10,4;UBERON:0001891,1.45e-10,4;UBERON:0009616,1.45e-10,4;UBERON:0010286,1.45e-10,4;UBERON:0011216,4.15e-10,194;UBERON:0002240,9.52e-10,6;UBERON:0005174,9.52e-10,6;UBERON:0001137,9.52e-10,6;UBERON:0002038,6.40e-09,3;UBERON:0009663,6.40e-09,3;UBERON:0009661,6.40e-09,3;UBERON:0000125,6.40e-09,3;UBERON:0002308,6.40e-09,3;UBERON:0002257,1.06e-07,3;UBERON:0004684,1.12e-07,3;UBERON:0002275,1.12e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.810035629990144,1.05162480675691,1.14260393761521,2.42955395046775,0.61245399607477,2.1086003624012,3.67687514644008,1.10115880999389,1.78762273319263,2.30409799884365,1.58263545276233,3.65950574409639,1.56274011167028,2.79182999001381,5.06486349028512,2.59757021220577,1.17851434189467,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,1.04853447583376,2.28750301409313,1.88481528169297,3.47648640384553,2.04572365864264,1.87009240103604,1.29793010454206,0,0,0,0,0.130120442962704,0,0,0,0.476255494059295,0.2562274405697,0.281105173679186,0.258703370739016,0,0.378212160335639,0.3519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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20351 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000135262_5end | |||
|cluster_id=chr3:88262943..88262965,- | |||
|description=CAGE_peak_15_at_Sema4a_5end | |||
|id=chr3:88262943..88262965,- | |||
|ontology_enrichment_celltype=CL:0000117!9.61e-26!23;CL:0000337!9.61e-26!23;CL:0000540!9.55e-17!33;CL:0000047!9.55e-17!33;CL:0000031!9.55e-17!33;CL:0000404!9.55e-17!33;CL:0000393!6.62e-13!39;CL:0000211!6.62e-13!39;CL:0002319!5.69e-11!43;CL:0000221!1.51e-10!44;CL:0000133!1.51e-10!44;CL:0000055!2.20e-08!50;CL:0002609!4.17e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-38,23;CL:0000337,1.71e-38,23;CL:0000540,2.31e-25,33;CL:0000047,2.31e-25,33;CL:0000031,2.31e-25,33;CL:0000404,2.31e-25,33;CL:0000393,1.01e-20,39;CL:0000211,1.01e-20,39;CL:0002319,2.39e-18,43;CL:0000221,8.03e-18,44;CL:0000133,8.03e-18,44;CL:0002321,1.83e-09,70;CL:0002614,6.40e-09,3;CL:0002613,4.20e-08,3;CL:0000120,1.01e-07,3;CL:0002612,1.06e-07,3;CL:0002610,1.12e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.23e-28!34;UBERON:0001049!1.35e-27!52;UBERON:0005068!1.35e-27!52;UBERON:0006241!1.35e-27!52;UBERON:0007135!1.35e-27!52;UBERON:0001017!9.04e-27!73;UBERON:0005743!9.04e-27!73;UBERON:0000955!1.05e-25!50;UBERON:0006238!1.05e-25!50;UBERON:0000073!1.24e-25!75;UBERON:0001016!1.24e-25!75;UBERON:0002616!1.27e-24!49;UBERON:0000033!1.18e-23!63;UBERON:0002791!9.27e-23!29;UBERON:0003528!9.27e-23!29;UBERON:0001893!9.27e-23!29;UBERON:0002346!4.60e-22!71;UBERON:0003075!4.60e-22!71;UBERON:0007284!4.60e-22!71;UBERON:0003056!1.01e-21!49;UBERON:0003080!2.13e-21!40;UBERON:0002780!1.65e-20!39;UBERON:0001890!1.65e-20!39;UBERON:0006240!1.65e-20!39;UBERON:0004121!3.34e-19!102;UBERON:0000924!3.34e-19!102;UBERON:0006601!3.34e-19!102;UBERON:0000956!1.03e-13!21;UBERON:0001869!1.03e-13!21;UBERON:0000203!1.03e-13!21;UBERON:0007811!1.08e-13!86;UBERON:0000153!4.83e-13!94;UBERON:0002420!1.10e-10!8;UBERON:0007245!1.10e-10!8;UBERON:0010009!1.10e-10!8;UBERON:0010011!1.10e-10!8;UBERON:0000454!1.10e-10!8;UBERON:0002619!3.74e-10!17;UBERON:0002298!9.60e-08!6;UBERON:0002021!1.95e-07!10;UBERON:0000411!1.95e-07!10;UBERON:0001950!1.95e-07!10;UBERON:0002240!1.97e-07!6;UBERON:0005174!1.97e-07!6;UBERON:0001137!1.97e-07!6;UBERON:0000369!5.10e-07!5;UBERON:0002435!5.10e-07!5;UBERON:0000204!5.10e-07!5;UBERON:0010082!5.10e-07!5;UBERON:0000025!6.34e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.00e-44,34;UBERON:0000073,9.77e-43,54;UBERON:0001017,4.97e-39,73;UBERON:0001016,8.45e-38,75;UBERON:0001049,4.25e-36,52;UBERON:0005068,4.25e-36,52;UBERON:0006241,4.25e-36,52;UBERON:0007135,4.25e-36,52;UBERON:0003528,2.20e-33,29;UBERON:0002791,2.20e-33,29;UBERON:0001893,2.20e-33,29;UBERON:0003080,3.22e-30,40;UBERON:0000955,1.20e-29,47;UBERON:0006238,1.20e-29,47;UBERON:0002780,1.37e-28,39;UBERON:0001890,1.37e-28,39;UBERON:0006240,1.37e-28,39;UBERON:0004121,2.46e-28,95;UBERON:0000924,2.46e-28,95;UBERON:0006601,2.46e-28,95;UBERON:0002346,4.34e-28,64;UBERON:0003075,4.34e-28,64;UBERON:0007284,4.34e-28,64;UBERON:0002616,8.07e-28,46;UBERON:0010371,8.31e-24,73;UBERON:0003056,1.26e-23,49;UBERON:0002420,8.86e-20,8;UBERON:0007245,8.86e-20,8;UBERON:0010009,8.86e-20,8;UBERON:0010011,8.86e-20,8;UBERON:0000454,8.86e-20,8;UBERON:0010314,1.63e-17,92;UBERON:0000956,7.51e-17,21;UBERON:0001869,7.51e-17,21;UBERON:0000203,7.51e-17,21;UBERON:0002619,3.21e-15,17;UBERON:0002021,3.39e-14,10;UBERON:0000411,3.39e-14,10;UBERON:0001950,3.39e-14,10;UBERON:0000025,7.61e-13,114;UBERON:0000369,1.81e-12,5;UBERON:0002435,1.81e-12,5;UBERON:0000204,1.81e-12,5;UBERON:0010082,1.81e-12,5;UBERON:0001948,9.20e-12,5;UBERON:0002315,9.20e-12,5;UBERON:0004111,1.45e-11,122;UBERON:0002950,1.45e-10,4;UBERON:0001891,1.45e-10,4;UBERON:0009616,1.45e-10,4;UBERON:0010286,1.45e-10,4;UBERON:0011216,4.15e-10,194;UBERON:0002240,9.52e-10,6;UBERON:0005174,9.52e-10,6;UBERON:0001137,9.52e-10,6;UBERON:0002038,6.40e-09,3;UBERON:0009663,6.40e-09,3;UBERON:0009661,6.40e-09,3;UBERON:0000125,6.40e-09,3;UBERON:0002308,6.40e-09,3;UBERON:0002257,1.06e-07,3;UBERON:0004684,1.12e-07,3;UBERON:0002275,1.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.810035629990144,1.05162480675691,1.14260393761521,2.42955395046775,0.61245399607477,2.1086003624012,3.67687514644008,1.10115880999389,1.78762273319263,2.30409799884365,1.58263545276233,3.65950574409639,1.56274011167028,2.79182999001381,5.06486349028512,2.59757021220577,1.17851434189467,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,1.04853447583376,2.28750301409313,1.88481528169297,3.47648640384553,2.04572365864264,1.87009240103604,1.29793010454206,0,0,0,0,0.130120442962704,0,0,0,0.476255494059295,0.2562274405697,0.281105173679186,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,0,1.3748254587495,2.74033007908257,1.5107877947794,4.05013500139084,1.35096360967266,1.35942722695261,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.551530525350042,0.44449345560323,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.543216455383447,0.561142271657738,0.474540072496697,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p15@Sema4a | |||
}} |
Revision as of 03:56, 4 August 2015
Short description: | p15@Sema4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Sema4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000135262_5end |
EntrezGene: | 20351 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.71e-38 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-38 | 23 |
neuron | 2.31e-25 | 33 |
neuronal stem cell | 2.31e-25 | 33 |
neuroblast | 2.31e-25 | 33 |
electrically signaling cell | 2.31e-25 | 33 |
electrically responsive cell | 1.01e-20 | 39 |
electrically active cell | 1.01e-20 | 39 |
neural cell | 2.39e-18 | 43 |
ectodermal cell | 8.03e-18 | 44 |
neurectodermal cell | 8.03e-18 | 44 |
embryonic cell | 1.83e-09 | 70 |
neuron of the substantia nigra | 6.40e-09 | 3 |
striatum neuron | 4.20e-08 | 3 |
granule cell | 1.01e-07 | 3 |
neuron of the ventral spinal cord | 1.06e-07 | 3 |
raphe nuclei neuron | 1.12e-07 | 3 |