FFCP PHASE1:Mm9::chr19:43965065..43965076,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:43965065..43965076,-|id=chr19:43965065..43965076,-|ontology_enrichment_celltype=CL:0000066!2.71e-09!25;CL:0002563!3.21e-08!9;CL:0002251!3.21e-08!9;CL:0000223!4.76e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,2.89e-13,25;CL:0002563,1.12e-12,9;CL:0002251,1.12e-12,9;CL:0000223,3.92e-10,20;CL:0000075,5.89e-10,7;CL:0000239,4.37e-09,6;CL:0000677,4.37e-09,6;CL:0000584,4.37e-09,6;CL:0002076,9.38e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.19e-27!43;UBERON:0005409!7.34e-25!59;UBERON:0001007!1.66e-18!128;UBERON:0001555!1.66e-18!128;UBERON:0007026!1.66e-18!128;UBERON:0004119!2.16e-18!130;UBERON:0000925!2.16e-18!130;UBERON:0006595!2.16e-18!130;UBERON:0004921!2.74e-17!126;UBERON:0004185!2.74e-17!126;UBERON:0000344!2.53e-12!15;UBERON:0001242!5.23e-11!13;UBERON:0000060!5.23e-11!13;UBERON:0001262!5.23e-11!13;UBERON:0004786!5.23e-11!13;UBERON:0002108!2.13e-08!16;UBERON:0000485!2.57e-08!11;UBERON:0003350!3.21e-08!9;UBERON:0004808!3.21e-08!9;UBERON:0001277!3.21e-08!9;UBERON:0004923!3.94e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.34e-35,31;UBERON:0005409,1.59e-30,47;UBERON:0000344,1.60e-19,15;UBERON:0001007,1.12e-17,116;UBERON:0001555,1.12e-17,116;UBERON:0007026,1.12e-17,116;UBERON:0001242,2.52e-17,13;UBERON:0001262,2.52e-17,13;UBERON:0004786,2.52e-17,13;UBERON:0004119,4.09e-17,118;UBERON:0000925,4.09e-17,118;UBERON:0006595,4.09e-17,118;UBERON:0004921,4.34e-16,114;UBERON:0003350,1.12e-12,9;UBERON:0004808,1.12e-12,9;UBERON:0001277,1.12e-12,9;UBERON:0000485,4.82e-12,11;UBERON:0004923,2.55e-10,24;UBERON:0001264,8.29e-07,12|phase1_expression=0.160148847104794,9.77131141390211,8.64498554840118,11.4936400296595,14.0250804384977,8.56184286750638,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,5.75972722056264,4.5881856213434,5.7423196411502,6.03066794622705,6.24866574789078,4.56056206695297,7.05684363327806,5.54326276638262,0,0,0,8.66554859253824,4.48833542467929,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,2.03991400112325,1.61910957491345,3.24888208723835,1.79210754838934,0.561777680527007,0,0,0,2.67602497575693,0,0,0,1.08245520505607,0.760079596425296,0,3.19714863213368,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,14.9113408974498,0,0,7.91916871146633,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.622034853050465,0.505445516867349,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0.646703978798527,0,1.05570674498369,0.219195732427575,0.556094498451196,0,0.823128545631774,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,6.08236303326152,0.853153002140936,1.62565670302307,3.35055399437443,2.8235693447268,3.11329261382818,3.04361001780095,2.84717436926707,2.63518327558417,6.28338022000674,5.96869416123452,2.72949721966768,7.19055526923377,7.78096979548899,8.16479220342906,0.379335801906163,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,0.911765658574141,1.51767689098217,1.32849133181642,1.56998727841375,1.48076596706161,2.37162101669719,0.166845105716094,0,0,0.405720242777006,0,0,0.575392274901621,0.648540907100142,0,0,1.48856379067401,2.18426371180192,1.51547326768267,2.33216637578486,4.3419916922703,0,0,0.325929952884052,0.339490171550376,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.518054945597687,0.289298117163023,0,0,2.45882136509518,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,1.32745138339963,2.6705869977048,0.604647113929502,1.32023555829129,1.77181135728464,0.307435147943927,1.55056975900933,1.45413491791002,1.42598951353889,2.52829406348653,1.05418608574999,2.06271086496374,0.340439605753788,0.18006109403131,0.905510786479282,0.643011105094777,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,1.32317038832977,0.8244312647074,0.322928853391811,0.844380948994182,1.3130957840345,1.31312719796049,6.12109756922687,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,1.62655573701479,1.18805874903981,1.04544148007234,0.436725127492355,1.34864346384821,1.40510874733071,2.35580347785627,10.4988128366352,5.59205381778233,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0.386379188064381,1.12609485270709,0.549454872801795,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.754505365544305,0.187283014939765,0.448176066834085,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0,0.685738504770831,0.532427418478012,0.953744759789284,0.726732083161643,0.282328141245992,0.423073039458382,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0,0,0|short_description=p@chr19:43965065..43965076,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:43965065..43965076,- | |||
|description=CAGE_peak_at_chr19:43965065..43965076,- | |||
|id=chr19:43965065..43965076,- | |||
|ontology_enrichment_celltype=CL:0000066!2.71e-09!25;CL:0002563!3.21e-08!9;CL:0002251!3.21e-08!9;CL:0000223!4.76e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.89e-13,25;CL:0002563,1.12e-12,9;CL:0002251,1.12e-12,9;CL:0000223,3.92e-10,20;CL:0000075,5.89e-10,7;CL:0000239,4.37e-09,6;CL:0000677,4.37e-09,6;CL:0000584,4.37e-09,6;CL:0002076,9.38e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.19e-27!43;UBERON:0005409!7.34e-25!59;UBERON:0001007!1.66e-18!128;UBERON:0001555!1.66e-18!128;UBERON:0007026!1.66e-18!128;UBERON:0004119!2.16e-18!130;UBERON:0000925!2.16e-18!130;UBERON:0006595!2.16e-18!130;UBERON:0004921!2.74e-17!126;UBERON:0004185!2.74e-17!126;UBERON:0000344!2.53e-12!15;UBERON:0001242!5.23e-11!13;UBERON:0000060!5.23e-11!13;UBERON:0001262!5.23e-11!13;UBERON:0004786!5.23e-11!13;UBERON:0002108!2.13e-08!16;UBERON:0000485!2.57e-08!11;UBERON:0003350!3.21e-08!9;UBERON:0004808!3.21e-08!9;UBERON:0001277!3.21e-08!9;UBERON:0004923!3.94e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.34e-35,31;UBERON:0005409,1.59e-30,47;UBERON:0000344,1.60e-19,15;UBERON:0001007,1.12e-17,116;UBERON:0001555,1.12e-17,116;UBERON:0007026,1.12e-17,116;UBERON:0001242,2.52e-17,13;UBERON:0001262,2.52e-17,13;UBERON:0004786,2.52e-17,13;UBERON:0004119,4.09e-17,118;UBERON:0000925,4.09e-17,118;UBERON:0006595,4.09e-17,118;UBERON:0004921,4.34e-16,114;UBERON:0003350,1.12e-12,9;UBERON:0004808,1.12e-12,9;UBERON:0001277,1.12e-12,9;UBERON:0000485,4.82e-12,11;UBERON:0004923,2.55e-10,24;UBERON:0001264,8.29e-07,12 | |||
|phase1_expression=0.160148847104794,9.77131141390211,8.64498554840118,11.4936400296595,14.0250804384977,8.56184286750638,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,5.75972722056264,4.5881856213434,5.7423196411502,6.03066794622705,6.24866574789078,4.56056206695297,7.05684363327806,5.54326276638262,0,0,0,8.66554859253824,4.48833542467929,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,2.03991400112325,1.61910957491345,3.24888208723835,1.79210754838934,0.561777680527007,0,0,0,2.67602497575693,0,0,0,1.08245520505607,0.760079596425296,0,3.19714863213368,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,14.9113408974498,0,0,7.91916871146633,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.622034853050465,0.505445516867349,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0.646703978798527,0,1.05570674498369,0.219195732427575,0.556094498451196,0,0.823128545631774,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,6.08236303326152,0.853153002140936,1.62565670302307,3.35055399437443,2.8235693447268,3.11329261382818,3.04361001780095,2.84717436926707,2.63518327558417,6.28338022000674,5.96869416123452,2.72949721966768,7.19055526923377,7.78096979548899,8.16479220342906,0.379335801906163,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,0.911765658574141,1.51767689098217,1.32849133181642,1.56998727841375,1.48076596706161,2.37162101669719,0.166845105716094,0,0,0.405720242777006,0,0,0.575392274901621,0.648540907100142,0,0,1.48856379067401,2.18426371180192,1.51547326768267,2.33216637578486,4.3419916922703,0,0,0.325929952884052,0.339490171550376,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.518054945597687,0.289298117163023,0,0,2.45882136509518,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,1.32745138339963,2.6705869977048,0.604647113929502,1.32023555829129,1.77181135728464,0.307435147943927,1.55056975900933,1.45413491791002,1.42598951353889,2.52829406348653,1.05418608574999,2.06271086496374,0.340439605753788,0.18006109403131,0.905510786479282,0.643011105094777,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,1.32317038832977,0.8244312647074,0.322928853391811,0.844380948994182,1.3130957840345,1.31312719796049,6.12109756922687,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,1.62655573701479,1.18805874903981,1.04544148007234,0.436725127492355,1.34864346384821,1.40510874733071,2.35580347785627,10.4988128366352,5.59205381778233,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0.386379188064381,1.12609485270709,0.549454872801795,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.754505365544305,0.187283014939765,0.448176066834085,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0,0.685738504770831,0.532427418478012,0.953744759789284,0.726732083161643,0.282328141245992,0.423073039458382,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p@chr19:43965065..43965076,- | |||
}} |
Latest revision as of 03:41, 4 August 2015
Short description: | p@chr19:43965065..43965076, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:43965065..43965076, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.89e-13 | 25 |
intestinal epithelial cell | 1.12e-12 | 9 |
epithelial cell of alimentary canal | 1.12e-12 | 9 |
endodermal cell | 3.92e-10 | 20 |
columnar/cuboidal epithelial cell | 5.89e-10 | 7 |
brush border epithelial cell | 4.37e-09 | 6 |
gut absorptive cell | 4.37e-09 | 6 |
enterocyte | 4.37e-09 | 6 |
endo-epithelial cell | 9.38e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.34e-35 | 31 |
gastrointestinal system | 1.59e-30 | 47 |
mucosa | 1.60e-19 | 15 |
digestive system | 1.12e-17 | 116 |
digestive tract | 1.12e-17 | 116 |
primitive gut | 1.12e-17 | 116 |
intestinal mucosa | 2.52e-17 | 13 |
wall of intestine | 2.52e-17 | 13 |
gastrointestinal system mucosa | 2.52e-17 | 13 |
endoderm-derived structure | 4.09e-17 | 118 |
endoderm | 4.09e-17 | 118 |
presumptive endoderm | 4.09e-17 | 118 |
subdivision of digestive tract | 4.34e-16 | 114 |
epithelium of mucosa | 1.12e-12 | 9 |
gastrointestinal system epithelium | 1.12e-12 | 9 |
intestinal epithelium | 1.12e-12 | 9 |
simple columnar epithelium | 4.82e-12 | 11 |
organ component layer | 2.55e-10 | 24 |
pancreas | 8.29e-07 | 12 |