FFCP PHASE1:Mm9::chr10:128181040..128181051,-: Difference between revisions
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{{FFCP|EntrezGene=13139|HGNC=|MCL_coexpression_id=1230|UniProt=O88673|association_with_transcript=60bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end|description=CAGE_peak_6_at_Dgka_5end|id=chr10:128181040..128181051,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,4.12e-10,9;CL:0000789,4.12e-10,9;CL:0002420,4.12e-10,9;CL:0002419,4.12e-10,9;CL:0000790,4.12e-10,9;CL:0000838,5.31e-09,12;CL:0000624,1.96e-08,8;CL:0000542,3.51e-08,13;CL:0000051,3.51e-08,13;CL:0000066,4.66e-08,25;CL:0000084,5.07e-08,11;CL:0000827,5.07e-08,11;CL:0000239,6.64e-08,6;CL:0000677,6.64e-08,6;CL:0000584,6.64e-08,6;CL:0000682,9.11e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.24e-13,15;UBERON:0000160,7.21e-11,31;UBERON:0001242,2.47e-10,13;UBERON:0001262,2.47e-10,13;UBERON:0004786,2.47e-10,13;UBERON:0001007,4.73e-09,116;UBERON:0001555,4.73e-09,116;UBERON:0007026,4.73e-09,116;UBERON:0004119,9.31e-09,118;UBERON:0000925,9.31e-09,118;UBERON:0006595,9.31e-09,118;UBERON:0004921,9.33e-08,114;UBERON:0002108,2.85e-07,4;UBERON:0004923,3.84e-07,24;UBERON:0005409,9.96e-07,47|phase1_expression=0,9.07336059862339,6.82498859084304,2.11724947914781,3.00537437967808,1.17515490338323,0.700837921786577,4.13194635013044,3.09735188733667,3.27690336850791,0.171217968225505,0.159544317990673,3.0816131387617,3.2345548895029,0,0.404950534779652,0,2.20823515750766,0.959801035240171,0.84877930359606,0.510259740906419,0.297872853602656,0,1.59992422793407,2.06468352960453,4.59385571292016,3.4460959692726,3.01659725760245,4.18051522804023,1.00812051903972,3.54768817048488,0,0,0,0.288851619751275,0,0,1.67412652294763,0.7813353445238,3.14114246384279,1.17646297606203,2.04913645487534,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.55994568650145,0,1.00669563634642,2.90144856804538,4.36921938885203,0,0,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.68014404096107,2.02905142091174,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,1.73192832808971,1.52015919285059,1.01104889002957,0.79928715803342,2.07150306917737,0.593768556259299,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.628340120440365,1.53274233125155,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0,0.622034853050465,0.505445516867349,0.210441855886474,0,0.689706313300419,0.360124259610698,0,0.204109497453984,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0.51469581422943,0.284163499395593,0,0.703578179943289,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.405344047729279,0.438599962275997,0,0.402619256281115,0,0,3.30418782983798,1.05780226665418,0,0,0.38660238396628,0,0,0.190225626112559,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,1.29682829924817,1.7922714592893,0,0,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.72353147925725,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0.339490171550376,0,0.502518772325447,0.714130922658041,1.36593553500459,0.472905432318573,0.221464689648775,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.955875191810208,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,1.07021290561242,0.329098041204242,0.608929898229199,0,0.63549621259146,0.220528398054962,0.8244312647074,0.484393280087717,0.603129249281559,0.716234064018819,0.656563598980245,1.1659233465194,0,0.854354403989263,0,0,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.655087691238533,0.134864346384821,0.41326727862668,0.26175594198403,1.29614973291793,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.706765149637033,0.45724083992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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13139 | |||
|HGNC= | |||
|MCL_coexpression_id=1230 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88673 | |||
|association_with_transcript=60bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end | |||
|cluster_id=chr10:128181040..128181051,- | |||
|description=CAGE_peak_6_at_Dgka_5end | |||
|id=chr10:128181040..128181051,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.12e-10,9;CL:0000789,4.12e-10,9;CL:0002420,4.12e-10,9;CL:0002419,4.12e-10,9;CL:0000790,4.12e-10,9;CL:0000838,5.31e-09,12;CL:0000624,1.96e-08,8;CL:0000542,3.51e-08,13;CL:0000051,3.51e-08,13;CL:0000066,4.66e-08,25;CL:0000084,5.07e-08,11;CL:0000827,5.07e-08,11;CL:0000239,6.64e-08,6;CL:0000677,6.64e-08,6;CL:0000584,6.64e-08,6;CL:0000682,9.11e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.24e-13,15;UBERON:0000160,7.21e-11,31;UBERON:0001242,2.47e-10,13;UBERON:0001262,2.47e-10,13;UBERON:0004786,2.47e-10,13;UBERON:0001007,4.73e-09,116;UBERON:0001555,4.73e-09,116;UBERON:0007026,4.73e-09,116;UBERON:0004119,9.31e-09,118;UBERON:0000925,9.31e-09,118;UBERON:0006595,9.31e-09,118;UBERON:0004921,9.33e-08,114;UBERON:0002108,2.85e-07,4;UBERON:0004923,3.84e-07,24;UBERON:0005409,9.96e-07,47 | |||
|phase1_expression=0,9.07336059862339,6.82498859084304,2.11724947914781,3.00537437967808,1.17515490338323,0.700837921786577,4.13194635013044,3.09735188733667,3.27690336850791,0.171217968225505,0.159544317990673,3.0816131387617,3.2345548895029,0,0.404950534779652,0,2.20823515750766,0.959801035240171,0.84877930359606,0.510259740906419,0.297872853602656,0,1.59992422793407,2.06468352960453,4.59385571292016,3.4460959692726,3.01659725760245,4.18051522804023,1.00812051903972,3.54768817048488,0,0,0,0.288851619751275,0,0,1.67412652294763,0.7813353445238,3.14114246384279,1.17646297606203,2.04913645487534,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.55994568650145,0,1.00669563634642,2.90144856804538,4.36921938885203,0,0,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.68014404096107,2.02905142091174,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,1.73192832808971,1.52015919285059,1.01104889002957,0.79928715803342,2.07150306917737,0.593768556259299,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.628340120440365,1.53274233125155,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0,0.622034853050465,0.505445516867349,0.210441855886474,0,0.689706313300419,0.360124259610698,0,0.204109497453984,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0.51469581422943,0.284163499395593,0,0.703578179943289,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.405344047729279,0.438599962275997,0,0.402619256281115,0,0,3.30418782983798,1.05780226665418,0,0,0.38660238396628,0,0,0.190225626112559,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,1.29682829924817,1.7922714592893,0,0,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.72353147925725,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0.339490171550376,0,0.502518772325447,0.714130922658041,1.36593553500459,0.472905432318573,0.221464689648775,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.955875191810208,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,1.07021290561242,0.329098041204242,0.608929898229199,0,0.63549621259146,0.220528398054962,0.8244312647074,0.484393280087717,0.603129249281559,0.716234064018819,0.656563598980245,1.1659233465194,0,0.854354403989263,0,0,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.655087691238533,0.134864346384821,0.41326727862668,0.26175594198403,1.29614973291793,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.706765149637033,0.457240839929999,0.403304740547362,0.584747284438515,1.05833025804362,1.40252282617883,0.680191150845634,0.443971906748129,1.70456327558004,0.839423081820392,1.35232715822533,0.375364950902364,0,3.64426244434412,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0,0.347652977834566,0,0,0.441596760403192,0,0.887379030796687,0.715308569841963,0.290692833264657,0,0.0846146078916765,0,0,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@Dgka | |||
}} |
Revision as of 03:10, 4 August 2015
Short description: | p6@Dgka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dgka_5end |
Coexpression cluster: | MCL_coexpression_mm9:1230 |
Association with transcript: | 60bp_to_ENSMUST00000026414, NM_016811, uc007hoc.1_5end |
EntrezGene: | 13139 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.12e-10 | 9 |
alpha-beta T cell | 4.12e-10 | 9 |
immature T cell | 4.12e-10 | 9 |
mature T cell | 4.12e-10 | 9 |
immature alpha-beta T cell | 4.12e-10 | 9 |
lymphoid lineage restricted progenitor cell | 5.31e-09 | 12 |
CD4-positive, alpha-beta T cell | 1.96e-08 | 8 |
lymphocyte | 3.51e-08 | 13 |
common lymphoid progenitor | 3.51e-08 | 13 |
epithelial cell | 4.66e-08 | 25 |
T cell | 5.07e-08 | 11 |
pro-T cell | 5.07e-08 | 11 |
brush border epithelial cell | 6.64e-08 | 6 |
gut absorptive cell | 6.64e-08 | 6 |
enterocyte | 6.64e-08 | 6 |
M cell of gut | 9.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.24e-13 | 15 |
intestine | 7.21e-11 | 31 |
intestinal mucosa | 2.47e-10 | 13 |
wall of intestine | 2.47e-10 | 13 |
gastrointestinal system mucosa | 2.47e-10 | 13 |
digestive system | 4.73e-09 | 116 |
digestive tract | 4.73e-09 | 116 |
primitive gut | 4.73e-09 | 116 |
endoderm-derived structure | 9.31e-09 | 118 |
endoderm | 9.31e-09 | 118 |
presumptive endoderm | 9.31e-09 | 118 |
subdivision of digestive tract | 9.33e-08 | 114 |
small intestine | 2.85e-07 | 4 |
organ component layer | 3.84e-07 | 24 |
gastrointestinal system | 9.96e-07 | 47 |