FFCP PHASE1:Mm9::chr7:120406547..120406552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:120406547..120406552,- | |||
|description=CAGE_peak_at_chr7:120406547..120406552,- | |description=CAGE_peak_at_chr7:120406547..120406552,- | ||
|id=chr7:120406547..120406552,- | |id=chr7:120406547..120406552,- | ||
|ontology_enrichment_celltype=CL:0002076!4.32e-14!15;CL:0000066!1.53e-13!25;CL:0002563!2.12e-12!9;CL:0002251!2.12e-12!9;CL:0000223!5.27e-10!20;CL:0000473!2.66e-08!3;CL:0000627!2.66e-08!3;CL:0000682!2.66e-08!3;CL:0002250!1.39e-07!3;CL:0000068!1.54e-07!3;CL:0002202!1.54e-07!3;CL:0000069!1.54e-07!3;CL:0002632!1.54e-07!3;CL:0002368!1.54e-07!3;CL:0000307!1.54e-07!3;CL:0000377!1.54e-07!3;CL:0000239!7.82e-07!6;CL:0000677!7.82e-07!6;CL:0000212!7.82e-07!6;CL:0000584!7.82e-07!6 | |ontology_enrichment_celltype=CL:0002076!4.32e-14!15;CL:0000066!1.53e-13!25;CL:0002563!2.12e-12!9;CL:0002251!2.12e-12!9;CL:0000223!5.27e-10!20;CL:0000473!2.66e-08!3;CL:0000627!2.66e-08!3;CL:0000682!2.66e-08!3;CL:0002250!1.39e-07!3;CL:0000068!1.54e-07!3;CL:0002202!1.54e-07!3;CL:0000069!1.54e-07!3;CL:0002632!1.54e-07!3;CL:0002368!1.54e-07!3;CL:0000307!1.54e-07!3;CL:0000377!1.54e-07!3;CL:0000239!7.82e-07!6;CL:0000677!7.82e-07!6;CL:0000212!7.82e-07!6;CL:0000584!7.82e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-27,25;CL:0002076,1.88e-24,15;CL:0002563,1.11e-23,9;CL:0002251,1.11e-23,9;CL:0000682,3.42e-19,3;CL:0000223,3.68e-18,20;CL:0000239,1.90e-16,6;CL:0000677,1.90e-16,6;CL:0000584,1.90e-16,6;CL:0000075,3.89e-14,7;CL:0002250,8.49e-09,3;CL:0000473,1.54e-08,7;CL:0000068,1.58e-08,3;CL:0002202,1.58e-08,3;CL:0000069,1.58e-08,3;CL:0002632,1.58e-08,3;CL:0002368,1.58e-08,3;CL:0000307,1.58e-08,3;CL:0000377,1.58e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.01e-14!15;UBERON:0003350!2.12e-12!9;UBERON:0004808!2.12e-12!9;UBERON:0001277!2.12e-12!9;UBERON:0001242!1.13e-10!13;UBERON:0000060!1.13e-10!13;UBERON:0001262!1.13e-10!13;UBERON:0004786!1.13e-10!13;UBERON:0000485!6.42e-10!11;UBERON:0005178!6.93e-09!17;UBERON:0005181!6.93e-09!17;UBERON:0002224!6.93e-09!17;UBERON:0000915!6.93e-09!17;UBERON:0008947!6.93e-09!17;UBERON:0003258!6.93e-09!17;UBERON:0004923!4.60e-08!24;UBERON:0003126!1.54e-07!3;UBERON:0001005!1.54e-07!3;UBERON:0007196!1.54e-07!3;UBERON:0001558!1.54e-07!3;UBERON:0000065!7.54e-07!41;UBERON:0005911!7.84e-07!69 | |ontology_enrichment_uberon=UBERON:0000344!3.01e-14!15;UBERON:0003350!2.12e-12!9;UBERON:0004808!2.12e-12!9;UBERON:0001277!2.12e-12!9;UBERON:0001242!1.13e-10!13;UBERON:0000060!1.13e-10!13;UBERON:0001262!1.13e-10!13;UBERON:0004786!1.13e-10!13;UBERON:0000485!6.42e-10!11;UBERON:0005178!6.93e-09!17;UBERON:0005181!6.93e-09!17;UBERON:0002224!6.93e-09!17;UBERON:0000915!6.93e-09!17;UBERON:0008947!6.93e-09!17;UBERON:0003258!6.93e-09!17;UBERON:0004923!4.60e-08!24;UBERON:0003126!1.54e-07!3;UBERON:0001005!1.54e-07!3;UBERON:0007196!1.54e-07!3;UBERON:0001558!1.54e-07!3;UBERON:0000065!7.54e-07!41;UBERON:0005911!7.84e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.90e-31,15;UBERON:0003350,1.11e-23,9;UBERON:0004808,1.11e-23,9;UBERON:0001277,1.11e-23,9;UBERON:0001242,7.10e-22,13;UBERON:0001262,7.10e-22,13;UBERON:0004786,7.10e-22,13;UBERON:0000485,2.48e-19,11;UBERON:0004923,5.69e-19,24;UBERON:0001962,1.64e-12,2;UBERON:0001961,1.64e-12,2;UBERON:0001744,1.64e-12,2;UBERON:0000160,7.66e-09,31;UBERON:0002465,1.21e-08,3;UBERON:0003126,1.58e-08,3;UBERON:0001005,1.58e-08,3;UBERON:0007196,1.58e-08,3;UBERON:0001558,1.58e-08,3;UBERON:0003199,3.20e-07,1 | |||
|phase1_expression=0,3.14077866875425,1.81999695755814,0,0,7.05092942029937,3.73780224952841,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,1.59992422793407,2.2940928106717,3.44539178469012,5.59990595006797,5.60225204983311,0,0,1.77384408524244,0,0,0,2.3108129580102,0.332469290716985,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0.983179888294428,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784068024066026,1.55184047204077,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,3.14077866875425,1.81999695755814,0,0,7.05092942029937,3.73780224952841,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,1.59992422793407,2.2940928106717,3.44539178469012,5.59990595006797,5.60225204983311,0,0,1.77384408524244,0,0,0,2.3108129580102,0.332469290716985,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0.983179888294428,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784068024066026,1.55184047204077,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:120406547..120406552,- | |short_description=p@chr7:120406547..120406552,- | ||
}} | }} |
Latest revision as of 01:55, 4 August 2015
Short description: | p@chr7:120406547..120406552, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:120406547..120406552, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-27 | 25 |
endo-epithelial cell | 1.88e-24 | 15 |
intestinal epithelial cell | 1.11e-23 | 9 |
epithelial cell of alimentary canal | 1.11e-23 | 9 |
M cell of gut | 3.42e-19 | 3 |
endodermal cell | 3.68e-18 | 20 |
brush border epithelial cell | 1.90e-16 | 6 |
gut absorptive cell | 1.90e-16 | 6 |
enterocyte | 1.90e-16 | 6 |
columnar/cuboidal epithelial cell | 3.89e-14 | 7 |
intestinal crypt stem cell | 8.49e-09 | 3 |
defensive cell | 1.54e-08 | 7 |
duct epithelial cell | 1.58e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-08 | 3 |
branched duct epithelial cell | 1.58e-08 | 3 |
epithelial cell of lower respiratory tract | 1.58e-08 | 3 |
respiratory epithelial cell | 1.58e-08 | 3 |
tracheal epithelial cell | 1.58e-08 | 3 |
tracheoblast | 1.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.90e-31 | 15 |
epithelium of mucosa | 1.11e-23 | 9 |
gastrointestinal system epithelium | 1.11e-23 | 9 |
intestinal epithelium | 1.11e-23 | 9 |
intestinal mucosa | 7.10e-22 | 13 |
wall of intestine | 7.10e-22 | 13 |
gastrointestinal system mucosa | 7.10e-22 | 13 |
simple columnar epithelium | 2.48e-19 | 11 |
organ component layer | 5.69e-19 | 24 |
gut-associated lymphoid tissue | 1.64e-12 | 2 |
mucosa-associated lymphoid tissue | 1.64e-12 | 2 |
lymphoid tissue | 1.64e-12 | 2 |
intestine | 7.66e-09 | 31 |
lymphoid system | 1.21e-08 | 3 |
trachea | 1.58e-08 | 3 |
respiratory airway | 1.58e-08 | 3 |
tracheobronchial tree | 1.58e-08 | 3 |
lower respiratory tract | 1.58e-08 | 3 |
egg chamber | 3.20e-07 | 1 |