FFCP PHASE1:Mm9::chr11:78156939..78156946,+: Difference between revisions
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{{FFCP|EntrezGene=22248|HGNC=|UniProt=Q9Z2R6|association_with_transcript=-37bp_to_ENSMUST00000002127_5end|description=CAGE_peak_4_at_Unc119_5end|id=chr11:78156939..78156946,+|ontology_enrichment_celltype=CL:0000117!5.45e-12!23;CL:0000337!5.45e-12!23;CL:0000540!7.84e-08!33;CL:0000047!7.84e-08!33;CL:0000031!7.84e-08!33;CL:0000404!7.84e-08!33;CL:0000393!2.19e-07!39;CL:0000211!2.19e-07!39;CL:0000221!7.59e-07!44;CL:0000133!7.59e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-40,23;CL:0000337,3.28e-40,23;CL:0000540,3.41e-27,33;CL:0000047,3.41e-27,33;CL:0000031,3.41e-27,33;CL:0000404,3.41e-27,33;CL:0000393,1.40e-22,39;CL:0000211,1.40e-22,39;CL:0002319,3.23e-20,43;CL:0000221,1.08e-19,44;CL:0000133,1.08e-19,44;CL:0002609,2.18e-16,6;CL:0002613,3.93e-12,3;CL:0000120,5.12e-12,3;CL:0002321,2.58e-11,70;CL:0000723,9.70e-11,91;CL:0000048,9.70e-11,91;CL:0000034,7.11e-10,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.28e-09!49;UBERON:0002346!3.40e-09!71;UBERON:0003075!3.40e-09!71;UBERON:0007284!3.40e-09!71;UBERON:0002020!4.65e-09!34;UBERON:0001049!9.62e-09!52;UBERON:0005068!9.62e-09!52;UBERON:0006241!9.62e-09!52;UBERON:0007135!9.62e-09!52;UBERON:0001017!1.51e-08!73;UBERON:0005743!1.51e-08!73;UBERON:0000073!7.44e-08!75;UBERON:0001016!7.44e-08!75;UBERON:0000033!1.20e-07!63;UBERON:0004121!4.59e-07!102;UBERON:0000924!4.59e-07!102;UBERON:0006601!4.59e-07!102;UBERON:0003080!4.89e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.97e-23,34;UBERON:0003528,1.57e-17,29;UBERON:0002791,1.57e-17,29;UBERON:0001893,1.57e-17,29;UBERON:0002420,4.67e-17,8;UBERON:0007245,4.67e-17,8;UBERON:0010009,4.67e-17,8;UBERON:0010011,4.67e-17,8;UBERON:0000454,4.67e-17,8;UBERON:0001049,2.18e-14,52;UBERON:0005068,2.18e-14,52;UBERON:0006241,2.18e-14,52;UBERON:0007135,2.18e-14,52;UBERON:0001017,2.72e-14,73;UBERON:0001016,7.95e-14,75;UBERON:0000073,9.39e-14,54;UBERON:0000369,6.24e-13,5;UBERON:0002435,6.24e-13,5;UBERON:0000204,6.24e-13,5;UBERON:0010082,6.24e-13,5;UBERON:0002780,1.70e-12,39;UBERON:0001890,1.70e-12,39;UBERON:0006240,1.70e-12,39;UBERON:0003080,3.94e-12,40;UBERON:0002346,3.54e-11,64;UBERON:0003075,3.54e-11,64;UBERON:0007284,3.54e-11,64;UBERON:0002616,2.85e-10,46;UBERON:0004121,3.10e-10,95;UBERON:0000924,3.10e-10,95;UBERON:0006601,3.10e-10,95;UBERON:0000955,5.22e-10,47;UBERON:0006238,5.22e-10,47;UBERON:0003056,1.63e-09,49;UBERON:0010371,1.84e-09,73;UBERON:0001948,1.33e-07,5;UBERON:0002315,1.33e-07,5;UBERON:0010314,6.11e-07,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,1.5626706890476,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.14058573539325,1.4850653216486,1.05162480675691,0.571301968807607,1.10434270475807,1.34739879136449,1.53352753629178,0,0,0.127687338085188,0.768032666281217,1.31886287730194,1.28082701043374,1.04182674111352,0.558365998002762,1.12552522006336,1.06958773443767,0.294628585473668,1.56608848879013,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.691846491768175,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0.449371918214468,0,2.1361239859187,0.347648640384553,0,0.83115217823824,0.324482526135515,0.305518091550949,0.124406970610093,0,0.631325567659422,0.260240885925407,0.459804208866946,0.720248519221397,0,0.204109497453984,0.640568601424249,0.468508622798644,0.776110112217047,0,0.378212160335639,1.05570674498369,1.09597866213787,0,0.696504333044333,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.11937234400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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22248 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z2R6 | |||
|association_with_transcript=-37bp_to_ENSMUST00000002127_5end | |||
|cluster_id=chr11:78156939..78156946,+ | |||
|description=CAGE_peak_4_at_Unc119_5end | |||
|id=chr11:78156939..78156946,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.45e-12!23;CL:0000337!5.45e-12!23;CL:0000540!7.84e-08!33;CL:0000047!7.84e-08!33;CL:0000031!7.84e-08!33;CL:0000404!7.84e-08!33;CL:0000393!2.19e-07!39;CL:0000211!2.19e-07!39;CL:0000221!7.59e-07!44;CL:0000133!7.59e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-40,23;CL:0000337,3.28e-40,23;CL:0000540,3.41e-27,33;CL:0000047,3.41e-27,33;CL:0000031,3.41e-27,33;CL:0000404,3.41e-27,33;CL:0000393,1.40e-22,39;CL:0000211,1.40e-22,39;CL:0002319,3.23e-20,43;CL:0000221,1.08e-19,44;CL:0000133,1.08e-19,44;CL:0002609,2.18e-16,6;CL:0002613,3.93e-12,3;CL:0000120,5.12e-12,3;CL:0002321,2.58e-11,70;CL:0000723,9.70e-11,91;CL:0000048,9.70e-11,91;CL:0000034,7.11e-10,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.28e-09!49;UBERON:0002346!3.40e-09!71;UBERON:0003075!3.40e-09!71;UBERON:0007284!3.40e-09!71;UBERON:0002020!4.65e-09!34;UBERON:0001049!9.62e-09!52;UBERON:0005068!9.62e-09!52;UBERON:0006241!9.62e-09!52;UBERON:0007135!9.62e-09!52;UBERON:0001017!1.51e-08!73;UBERON:0005743!1.51e-08!73;UBERON:0000073!7.44e-08!75;UBERON:0001016!7.44e-08!75;UBERON:0000033!1.20e-07!63;UBERON:0004121!4.59e-07!102;UBERON:0000924!4.59e-07!102;UBERON:0006601!4.59e-07!102;UBERON:0003080!4.89e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.97e-23,34;UBERON:0003528,1.57e-17,29;UBERON:0002791,1.57e-17,29;UBERON:0001893,1.57e-17,29;UBERON:0002420,4.67e-17,8;UBERON:0007245,4.67e-17,8;UBERON:0010009,4.67e-17,8;UBERON:0010011,4.67e-17,8;UBERON:0000454,4.67e-17,8;UBERON:0001049,2.18e-14,52;UBERON:0005068,2.18e-14,52;UBERON:0006241,2.18e-14,52;UBERON:0007135,2.18e-14,52;UBERON:0001017,2.72e-14,73;UBERON:0001016,7.95e-14,75;UBERON:0000073,9.39e-14,54;UBERON:0000369,6.24e-13,5;UBERON:0002435,6.24e-13,5;UBERON:0000204,6.24e-13,5;UBERON:0010082,6.24e-13,5;UBERON:0002780,1.70e-12,39;UBERON:0001890,1.70e-12,39;UBERON:0006240,1.70e-12,39;UBERON:0003080,3.94e-12,40;UBERON:0002346,3.54e-11,64;UBERON:0003075,3.54e-11,64;UBERON:0007284,3.54e-11,64;UBERON:0002616,2.85e-10,46;UBERON:0004121,3.10e-10,95;UBERON:0000924,3.10e-10,95;UBERON:0006601,3.10e-10,95;UBERON:0000955,5.22e-10,47;UBERON:0006238,5.22e-10,47;UBERON:0003056,1.63e-09,49;UBERON:0010371,1.84e-09,73;UBERON:0001948,1.33e-07,5;UBERON:0002315,1.33e-07,5;UBERON:0010314,6.11e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,1.5626706890476,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.14058573539325,1.4850653216486,1.05162480675691,0.571301968807607,1.10434270475807,1.34739879136449,1.53352753629178,0,0,0.127687338085188,0.768032666281217,1.31886287730194,1.28082701043374,1.04182674111352,0.558365998002762,1.12552522006336,1.06958773443767,0.294628585473668,1.56608848879013,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.691846491768175,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0.449371918214468,0,2.1361239859187,0.347648640384553,0,0.83115217823824,0.324482526135515,0.305518091550949,0.124406970610093,0,0.631325567659422,0.260240885925407,0.459804208866946,0.720248519221397,0,0.204109497453984,0.640568601424249,0.468508622798644,0.776110112217047,0,0.378212160335639,1.05570674498369,1.09597866213787,0,0.696504333044333,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0.474503990371703,0.203319467126849,0,0,0,0,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.827292452285488,0.388902376688095,0.645799117388655,0,0.469428954583016,0.651021924219751,0.629156066554265,0.724752362478018,0.864090018773596,0.316011120628178,0.202725215290164,0.513554785824136,0.389762468933385,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,0.665957860122194,0,0.167884616364078,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,1.36586884603307,0.243106717068294,0.209613162627982,0.551530525350042,0,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0,0.499621155875892,0,0.429742108096597,0.57386499620653,0,0 | |||
|short_description=p4@Unc119 | |||
}} |
Revision as of 01:45, 4 August 2015
Short description: | p4@Unc119 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Unc119_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENSMUST00000002127_5end |
EntrezGene: | 22248 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-40 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-40 | 23 |
neuron | 3.41e-27 | 33 |
neuronal stem cell | 3.41e-27 | 33 |
neuroblast | 3.41e-27 | 33 |
electrically signaling cell | 3.41e-27 | 33 |
electrically responsive cell | 1.40e-22 | 39 |
electrically active cell | 1.40e-22 | 39 |
neural cell | 3.23e-20 | 43 |
ectodermal cell | 1.08e-19 | 44 |
neurectodermal cell | 1.08e-19 | 44 |
neuron of cerebral cortex | 2.18e-16 | 6 |
striatum neuron | 3.93e-12 | 3 |
granule cell | 5.12e-12 | 3 |
embryonic cell | 2.58e-11 | 70 |
somatic stem cell | 9.70e-11 | 91 |
multi fate stem cell | 9.70e-11 | 91 |
stem cell | 7.11e-10 | 97 |