FFCP PHASE1:Mm9::chr16:56721374..56721385,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:56721374..56721385,-
|short_description=p@chr16:56721374..56721385,-
|description=CAGE_peak_at_chr16:56721374..56721385,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:56721374..56721385,- | |||
|description=CAGE_peak_at_chr16:56721374..56721385,- | |||
|id=chr16:56721374..56721385,- | |||
|ontology_enrichment_celltype=CL:0002563!2.51e-10!9;CL:0002251!2.51e-10!9;CL:0000239!1.12e-09!6;CL:0000677!1.12e-09!6;CL:0000212!1.12e-09!6;CL:0000584!1.12e-09!6;CL:0000075!3.89e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.68e-15,6;CL:0000677,1.68e-15,6;CL:0000584,1.68e-15,6;CL:0002563,2.41e-13,9;CL:0002251,2.41e-13,9;CL:0000075,3.42e-13,7;CL:0000682,1.56e-09,3;CL:0000066,5.81e-09,25;CL:0002076,1.30e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.68e-24!43;UBERON:0000344!8.12e-19!15;UBERON:0005409!1.17e-16!59;UBERON:0001242!9.13e-16!13;UBERON:0000060!9.13e-16!13;UBERON:0001262!9.13e-16!13;UBERON:0004786!9.13e-16!13;UBERON:0003350!2.51e-10!9;UBERON:0004808!2.51e-10!9;UBERON:0001277!2.51e-10!9;UBERON:0004923!3.30e-10!24;UBERON:0000485!4.05e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-51,31;UBERON:0005409,6.43e-35,47;UBERON:0000344,1.43e-27,15;UBERON:0001242,1.98e-22,13;UBERON:0001262,1.98e-22,13;UBERON:0004786,1.98e-22,13;UBERON:0004923,3.77e-16,24;UBERON:0003350,2.41e-13,9;UBERON:0004808,2.41e-13,9;UBERON:0001277,2.41e-13,9;UBERON:0001007,3.83e-13,116;UBERON:0001555,3.83e-13,116;UBERON:0007026,3.83e-13,116;UBERON:0004119,8.14e-13,118;UBERON:0000925,8.14e-13,118;UBERON:0006595,8.14e-13,118;UBERON:0002108,2.68e-11,4;UBERON:0004921,5.71e-11,114;UBERON:0000485,9.72e-11,11;UBERON:0000331,6.91e-09,3;UBERON:0002116,6.91e-09,3;UBERON:0001204,6.91e-09,3;UBERON:0001168,6.91e-09,3;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2 | |||
|phase1_expression=0,3.48975407639361,11.8299802241279,3.62957053568196,2.50447864973174,4.02910252588535,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,8.02932483735095,10.9104073181854,9.47676391549965,5.60225204983311,7.41091335879858,5.29263272495855,3.54768817048488,0,0,0,0,1.82858109894342,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.81002760729451,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,4.23120906661671,0,0,0.38660238396628,1.4117846723634,1.77902435075896,3.61428689613862,5.21981967698963,5.27036655116835,4.77536896720512,4.17808591286417,4.874102177978,4.49409704327111,6.26800344636613,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,2.01466786693992,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0,0.17230640686684,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,3.48975407639361,11.8299802241279,3.62957053568196,2.50447864973174,4.02910252588535,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,8.02932483735095,10.9104073181854,9.47676391549965,5.60225204983311,7.41091335879858,5.29263272495855,3.54768817048488,0,0,0,0,1.82858109894342,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.81002760729451,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,4.23120906661671,0,0,0.38660238396628,1.4117846723634,1.77902435075896,3.61428689613862,5.21981967698963,5.27036655116835,4.77536896720512,4.17808591286417,4.874102177978,4.49409704327111,6.26800344636613,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,2.01466786693992,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0,0.17230640686684,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr16:56721374..56721385,- | |||
}} | }} |
Latest revision as of 23:37, 3 August 2015
Short description: | p@chr16:56721374..56721385, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:56721374..56721385, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.68e-15 | 6 |
gut absorptive cell | 1.68e-15 | 6 |
enterocyte | 1.68e-15 | 6 |
intestinal epithelial cell | 2.41e-13 | 9 |
epithelial cell of alimentary canal | 2.41e-13 | 9 |
columnar/cuboidal epithelial cell | 3.42e-13 | 7 |
M cell of gut | 1.56e-09 | 3 |
epithelial cell | 5.81e-09 | 25 |
endo-epithelial cell | 1.30e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.00e-51 | 31 |
gastrointestinal system | 6.43e-35 | 47 |
mucosa | 1.43e-27 | 15 |
intestinal mucosa | 1.98e-22 | 13 |
wall of intestine | 1.98e-22 | 13 |
gastrointestinal system mucosa | 1.98e-22 | 13 |
organ component layer | 3.77e-16 | 24 |
epithelium of mucosa | 2.41e-13 | 9 |
gastrointestinal system epithelium | 2.41e-13 | 9 |
intestinal epithelium | 2.41e-13 | 9 |
digestive system | 3.83e-13 | 116 |
digestive tract | 3.83e-13 | 116 |
primitive gut | 3.83e-13 | 116 |
endoderm-derived structure | 8.14e-13 | 118 |
endoderm | 8.14e-13 | 118 |
presumptive endoderm | 8.14e-13 | 118 |
small intestine | 2.68e-11 | 4 |
subdivision of digestive tract | 5.71e-11 | 114 |
simple columnar epithelium | 9.72e-11 | 11 |
ileal mucosa | 6.91e-09 | 3 |
ileum | 6.91e-09 | 3 |
mucosa of small intestine | 6.91e-09 | 3 |
wall of small intestine | 6.91e-09 | 3 |
gut-associated lymphoid tissue | 7.62e-07 | 2 |
mucosa-associated lymphoid tissue | 7.62e-07 | 2 |
lymphoid tissue | 7.62e-07 | 2 |