FFCP PHASE1:Mm9::chr14:104858550..104858554,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc007uxa.1,uc011zpm.1_5end | |association_with_transcript=0bp_to_uc007uxa.1,uc011zpm.1_5end | ||
|cluster_id=chr14:104858550..104858554,- | |||
|description=CAGE_peak_1_at_uc007uxa.1_5end,CAGE_peak_1_at_uc011zpm.1_5end | |description=CAGE_peak_1_at_uc007uxa.1_5end,CAGE_peak_1_at_uc011zpm.1_5end | ||
|id=chr14:104858550..104858554,- | |id=chr14:104858550..104858554,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,3.16e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.33e-16!9;UBERON:0000019!5.33e-16!9;UBERON:0000047!5.33e-16!9;UBERON:0004088!5.33e-16!9;UBERON:0002104!5.33e-16!9;UBERON:0001456!5.33e-16!9;UBERON:0003072!5.33e-16!9;UBERON:0003071!5.33e-16!9;UBERON:0004128!5.33e-16!9;UBERON:0001444!1.15e-12!11;UBERON:0000020!2.02e-11!12;UBERON:0001032!2.02e-11!12;UBERON:0004456!2.02e-11!12;UBERON:0005085!2.28e-10!13 | |ontology_enrichment_uberon=UBERON:0000970!5.33e-16!9;UBERON:0000019!5.33e-16!9;UBERON:0000047!5.33e-16!9;UBERON:0004088!5.33e-16!9;UBERON:0002104!5.33e-16!9;UBERON:0001456!5.33e-16!9;UBERON:0003072!5.33e-16!9;UBERON:0003071!5.33e-16!9;UBERON:0004128!5.33e-16!9;UBERON:0001444!1.15e-12!11;UBERON:0000020!2.02e-11!12;UBERON:0001032!2.02e-11!12;UBERON:0004456!2.02e-11!12;UBERON:0005085!2.28e-10!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.68e-35,9;UBERON:0000019,1.68e-35,9;UBERON:0000047,1.68e-35,9;UBERON:0010312,1.68e-35,9;UBERON:0004088,1.68e-35,9;UBERON:0002104,1.68e-35,9;UBERON:0001456,1.68e-35,9;UBERON:0003072,1.68e-35,9;UBERON:0004128,1.68e-35,9;UBERON:0003071,1.68e-35,9;UBERON:0001444,4.56e-29,11;UBERON:0000020,1.19e-26,12;UBERON:0001032,1.19e-26,12;UBERON:0004456,1.19e-26,12;UBERON:0000033,1.32e-24,13;UBERON:0005085,1.32e-24,13;UBERON:0001896,2.38e-18,2;UBERON:0002298,2.38e-18,2;UBERON:0005290,2.38e-18,2;UBERON:0010096,2.38e-18,2;UBERON:0007811,7.74e-09,36;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002346,1.73e-08,64;UBERON:0003075,1.73e-08,64;UBERON:0007284,1.73e-08,64;UBERON:0010371,2.22e-07,73;UBERON:0000153,2.28e-07,43;UBERON:0004733,9.76e-07,6;UBERON:0004732,9.76e-07,6;UBERON:0002028,9.76e-07,6;UBERON:0007277,9.76e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0.153606533256243,0.263772575460388,0.640413505216868,0,0,0,0,0,0.711858403995515,0.931997229126503,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0.631325567659422,0.650602214813519,1.83921683546778,1.98068342785884,3.76762044589288,5.23881043465224,2.17793324484245,2.15513966487376,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.853668028770671,0,0.628839487883947,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.280924522409647,0.640251524048693,0.34461281373368,0.476293691283074,0.579421629724277,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0.376437521661322,0.507687647350059,0.914639864363863,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.771626443924566,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0.153606533256243,0.263772575460388,0.640413505216868,0,0,0,0,0,0.711858403995515,0.931997229126503,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0.631325567659422,0.650602214813519,1.83921683546778,1.98068342785884,3.76762044589288,5.23881043465224,2.17793324484245,2.15513966487376,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.853668028770671,0,0.628839487883947,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.280924522409647,0.640251524048693,0.34461281373368,0.476293691283074,0.579421629724277,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0.376437521661322,0.507687647350059,0.914639864363863,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.771626443924566,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p1@uc007uxa.1,p1@uc011zpm.1 | |short_description=p1@uc007uxa.1,p1@uc011zpm.1 | ||
}} | }} |
Latest revision as of 22:44, 3 August 2015
Short description: | p1@uc007uxa.1, p1@uc011zpm.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007uxa.1_5end, CAGE_peak_1_at_uc011zpm.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 0bp_to_uc007uxa.1, uc011zpm.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 3.16e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.68e-35 | 9 |
camera-type eye | 1.68e-35 | 9 |
simple eye | 1.68e-35 | 9 |
immature eye | 1.68e-35 | 9 |
ocular region | 1.68e-35 | 9 |
visual system | 1.68e-35 | 9 |
face | 1.68e-35 | 9 |
optic cup | 1.68e-35 | 9 |
optic vesicle | 1.68e-35 | 9 |
eye primordium | 1.68e-35 | 9 |
subdivision of head | 4.56e-29 | 11 |
sense organ | 1.19e-26 | 12 |
sensory system | 1.19e-26 | 12 |
entire sense organ system | 1.19e-26 | 12 |
head | 1.32e-24 | 13 |
ectodermal placode | 1.32e-24 | 13 |
medulla oblongata | 2.38e-18 | 2 |
brainstem | 2.38e-18 | 2 |
myelencephalon | 2.38e-18 | 2 |
future myelencephalon | 2.38e-18 | 2 |
craniocervical region | 7.74e-09 | 36 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neurectoderm | 1.73e-08 | 64 |
neural plate | 1.73e-08 | 64 |
presumptive neural plate | 1.73e-08 | 64 |
ecto-epithelium | 2.22e-07 | 73 |
anterior region of body | 2.28e-07 | 43 |
segmental subdivision of hindbrain | 9.76e-07 | 6 |
segmental subdivision of nervous system | 9.76e-07 | 6 |
hindbrain | 9.76e-07 | 6 |
presumptive hindbrain | 9.76e-07 | 6 |