FFCP PHASE1:Mm9::chr11:70272314..70272350,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=661|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70272314..70272350,-|id=chr11:70272314..70272350,-|ontology_enrichment_celltype=CL:0002563!1.55e-09!9;CL:0002251!1.55e-09!9;CL:0002076!2.95e-09!15;CL:0000066!1.43e-08!25;CL:0000223!3.00e-07!20;CL:0000239!3.09e-07!6;CL:0000677!3.09e-07!6;CL:0000212!3.09e-07!6;CL:0000584!3.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0000066,4.34e-21,25;CL:0002076,2.64e-17,15;CL:0000223,1.30e-15,20;CL:0000239,3.20e-14,6;CL:0000677,3.20e-14,6;CL:0000584,3.20e-14,6;CL:0002563,3.78e-13,9;CL:0002251,3.78e-13,9;CL:0000075,3.73e-12,7;CL:0000068,2.16e-11,3;CL:0002202,2.16e-11,3;CL:0000069,2.16e-11,3;CL:0002632,2.16e-11,3;CL:0002368,2.16e-11,3;CL:0000307,2.16e-11,3;CL:0000377,2.16e-11,3;CL:0000682,2.73e-11,3;CL:0000473,4.56e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.04e-13!15;UBERON:0001242!8.27e-11!13;UBERON:0000060!8.27e-11!13;UBERON:0001262!8.27e-11!13;UBERON:0004786!8.27e-11!13;UBERON:0003350!1.55e-09!9;UBERON:0004808!1.55e-09!9;UBERON:0001277!1.55e-09!9;UBERON:0004119!3.82e-09!130;UBERON:0000925!3.82e-09!130;UBERON:0006595!3.82e-09!130;UBERON:0004923!3.89e-09!24;UBERON:0001007!5.49e-09!128;UBERON:0001555!5.49e-09!128;UBERON:0007026!5.49e-09!128;UBERON:0004921!6.84e-08!126;UBERON:0004185!6.84e-08!126;UBERON:0000160!2.51e-07!43;UBERON:0000485!2.83e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.16e-21,15;UBERON:0001242,1.29e-15,13;UBERON:0001262,1.29e-15,13;UBERON:0004786,1.29e-15,13;UBERON:0003350,3.78e-13,9;UBERON:0004808,3.78e-13,9;UBERON:0001277,3.78e-13,9;UBERON:0004923,1.07e-12,24;UBERON:0003126,2.16e-11,3;UBERON:0001005,2.16e-11,3;UBERON:0007196,2.16e-11,3;UBERON:0001558,2.16e-11,3;UBERON:0002465,3.19e-11,3;UBERON:0000485,1.19e-10,11;UBERON:0001962,2.03e-08,2;UBERON:0001961,2.03e-08,2;UBERON:0001744,2.03e-08,2;UBERON:0000160,2.15e-07,31|phase1_expression=0,17.4487703819681,21.3849642513082,0.60492842261366,1.00179145989269,6.88305014838748,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,15.359272588167,17.8939239232393,10.9104073181854,11.1998119001359,13.7901588918969,0.380046838912748,0,9.5344119581781,0,0,0,1.73310971850765,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.899899717281399,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7249860819621,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,11.4740251735943,11.4011939463794,13.6491600153991,0.34255163915718,1.55362730188303,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,2.97376904685418,1.85115396664481,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0.779856348476481,0,0.432276099749388,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0.44292937929755,0.478364305972461,1.14704320301017,1.03610989119537,0.867894351489069,1.50791283939272,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.120625849856312,0.596861720015682,0.492422699235184,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0.480781798079875,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.292373642219257,0.577271049841977,0.116876902181569,0,1.33191572024439,0,1.67884616364078,0,0.375364950902364,2.93042598827624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr11:70272314..70272350,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=661 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:70272314..70272350,- | |||
|description=CAGE_peak_at_chr11:70272314..70272350,- | |||
|id=chr11:70272314..70272350,- | |||
|ontology_enrichment_celltype=CL:0002563!1.55e-09!9;CL:0002251!1.55e-09!9;CL:0002076!2.95e-09!15;CL:0000066!1.43e-08!25;CL:0000223!3.00e-07!20;CL:0000239!3.09e-07!6;CL:0000677!3.09e-07!6;CL:0000212!3.09e-07!6;CL:0000584!3.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.34e-21,25;CL:0002076,2.64e-17,15;CL:0000223,1.30e-15,20;CL:0000239,3.20e-14,6;CL:0000677,3.20e-14,6;CL:0000584,3.20e-14,6;CL:0002563,3.78e-13,9;CL:0002251,3.78e-13,9;CL:0000075,3.73e-12,7;CL:0000068,2.16e-11,3;CL:0002202,2.16e-11,3;CL:0000069,2.16e-11,3;CL:0002632,2.16e-11,3;CL:0002368,2.16e-11,3;CL:0000307,2.16e-11,3;CL:0000377,2.16e-11,3;CL:0000682,2.73e-11,3;CL:0000473,4.56e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.04e-13!15;UBERON:0001242!8.27e-11!13;UBERON:0000060!8.27e-11!13;UBERON:0001262!8.27e-11!13;UBERON:0004786!8.27e-11!13;UBERON:0003350!1.55e-09!9;UBERON:0004808!1.55e-09!9;UBERON:0001277!1.55e-09!9;UBERON:0004119!3.82e-09!130;UBERON:0000925!3.82e-09!130;UBERON:0006595!3.82e-09!130;UBERON:0004923!3.89e-09!24;UBERON:0001007!5.49e-09!128;UBERON:0001555!5.49e-09!128;UBERON:0007026!5.49e-09!128;UBERON:0004921!6.84e-08!126;UBERON:0004185!6.84e-08!126;UBERON:0000160!2.51e-07!43;UBERON:0000485!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.16e-21,15;UBERON:0001242,1.29e-15,13;UBERON:0001262,1.29e-15,13;UBERON:0004786,1.29e-15,13;UBERON:0003350,3.78e-13,9;UBERON:0004808,3.78e-13,9;UBERON:0001277,3.78e-13,9;UBERON:0004923,1.07e-12,24;UBERON:0003126,2.16e-11,3;UBERON:0001005,2.16e-11,3;UBERON:0007196,2.16e-11,3;UBERON:0001558,2.16e-11,3;UBERON:0002465,3.19e-11,3;UBERON:0000485,1.19e-10,11;UBERON:0001962,2.03e-08,2;UBERON:0001961,2.03e-08,2;UBERON:0001744,2.03e-08,2;UBERON:0000160,2.15e-07,31 | |||
|phase1_expression=0,17.4487703819681,21.3849642513082,0.60492842261366,1.00179145989269,6.88305014838748,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,15.359272588167,17.8939239232393,10.9104073181854,11.1998119001359,13.7901588918969,0.380046838912748,0,9.5344119581781,0,0,0,1.73310971850765,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.899899717281399,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7249860819621,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,11.4740251735943,11.4011939463794,13.6491600153991,0.34255163915718,1.55362730188303,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,2.97376904685418,1.85115396664481,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0.779856348476481,0,0.432276099749388,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0.44292937929755,0.478364305972461,1.14704320301017,1.03610989119537,0.867894351489069,1.50791283939272,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.120625849856312,0.596861720015682,0.492422699235184,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0.480781798079875,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.292373642219257,0.577271049841977,0.116876902181569,0,1.33191572024439,0,1.67884616364078,0,0.375364950902364,2.93042598827624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:70272314..70272350,- | |||
}} |
Latest revision as of 21:04, 3 August 2015
Short description: | p@chr11:70272314..70272350, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70272314..70272350, - |
Coexpression cluster: | MCL_coexpression_mm9:661 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.34e-21 | 25 |
endo-epithelial cell | 2.64e-17 | 15 |
endodermal cell | 1.30e-15 | 20 |
brush border epithelial cell | 3.20e-14 | 6 |
gut absorptive cell | 3.20e-14 | 6 |
enterocyte | 3.20e-14 | 6 |
intestinal epithelial cell | 3.78e-13 | 9 |
epithelial cell of alimentary canal | 3.78e-13 | 9 |
columnar/cuboidal epithelial cell | 3.73e-12 | 7 |
duct epithelial cell | 2.16e-11 | 3 |
epithelial cell of tracheobronchial tree | 2.16e-11 | 3 |
branched duct epithelial cell | 2.16e-11 | 3 |
epithelial cell of lower respiratory tract | 2.16e-11 | 3 |
respiratory epithelial cell | 2.16e-11 | 3 |
tracheal epithelial cell | 2.16e-11 | 3 |
tracheoblast | 2.16e-11 | 3 |
M cell of gut | 2.73e-11 | 3 |
defensive cell | 4.56e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.16e-21 | 15 |
intestinal mucosa | 1.29e-15 | 13 |
wall of intestine | 1.29e-15 | 13 |
gastrointestinal system mucosa | 1.29e-15 | 13 |
epithelium of mucosa | 3.78e-13 | 9 |
gastrointestinal system epithelium | 3.78e-13 | 9 |
intestinal epithelium | 3.78e-13 | 9 |
organ component layer | 1.07e-12 | 24 |
trachea | 2.16e-11 | 3 |
respiratory airway | 2.16e-11 | 3 |
tracheobronchial tree | 2.16e-11 | 3 |
lower respiratory tract | 2.16e-11 | 3 |
lymphoid system | 3.19e-11 | 3 |
simple columnar epithelium | 1.19e-10 | 11 |
gut-associated lymphoid tissue | 2.03e-08 | 2 |
mucosa-associated lymphoid tissue | 2.03e-08 | 2 |
lymphoid tissue | 2.03e-08 | 2 |
intestine | 2.15e-07 | 31 |