FFCP PHASE1:Mm9::chr5:137538855..137538875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137538855..137538875,- | |||
|description=CAGE_peak_at_chr5:137538855..137538875,- | |description=CAGE_peak_at_chr5:137538855..137538875,- | ||
|id=chr5:137538855..137538875,- | |id=chr5:137538855..137538875,- | ||
|ontology_enrichment_celltype=CL:0000680!3.77e-12!6;CL:0000183!3.77e-12!6;CL:0000187!3.77e-12!6;CL:0000056!3.77e-12!6;CL:0000222!2.82e-10!7;CL:0000548!1.29e-08!115;CL:0000004!1.29e-08!115;CL:0000255!1.29e-08!115;CL:0000333!2.07e-08!10;CL:0000095!2.07e-08!10;CL:0000243!2.07e-08!10;CL:0000123!2.07e-08!10;CL:0000125!2.07e-08!10;CL:0000030!2.07e-08!10;CL:0000339!2.07e-08!10;CL:0002371!3.36e-08!118;CL:0000144!8.29e-08!121;CL:0000012!8.29e-08!121;CL:0000355!8.88e-08!9;CL:0002494!2.67e-07!3;CL:0000737!2.67e-07!3;CL:0000746!2.67e-07!3;CL:0000513!2.67e-07!3;CL:0000055!4.07e-07!50;CL:0000349!6.00e-07!3;CL:0000351!6.00e-07!3;CL:0002092!6.55e-07!3;CL:0002540!6.55e-07!3 | |ontology_enrichment_celltype=CL:0000680!3.77e-12!6;CL:0000183!3.77e-12!6;CL:0000187!3.77e-12!6;CL:0000056!3.77e-12!6;CL:0000222!2.82e-10!7;CL:0000548!1.29e-08!115;CL:0000004!1.29e-08!115;CL:0000255!1.29e-08!115;CL:0000333!2.07e-08!10;CL:0000095!2.07e-08!10;CL:0000243!2.07e-08!10;CL:0000123!2.07e-08!10;CL:0000125!2.07e-08!10;CL:0000030!2.07e-08!10;CL:0000339!2.07e-08!10;CL:0002371!3.36e-08!118;CL:0000144!8.29e-08!121;CL:0000012!8.29e-08!121;CL:0000355!8.88e-08!9;CL:0002494!2.67e-07!3;CL:0000737!2.67e-07!3;CL:0000746!2.67e-07!3;CL:0000513!2.67e-07!3;CL:0000055!4.07e-07!50;CL:0000349!6.00e-07!3;CL:0000351!6.00e-07!3;CL:0002092!6.55e-07!3;CL:0002540!6.55e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.78e-21,3;CL:0000737,1.78e-21,3;CL:0000746,1.78e-21,3;CL:0000513,1.78e-21,3;CL:0002605,2.29e-14,2;CL:0002604,2.29e-14,2;CL:0000680,4.72e-11,6;CL:0000187,4.72e-11,6;CL:0000056,4.72e-11,6;CL:0002092,5.56e-10,3;CL:0002540,5.56e-10,3;CL:0000349,6.17e-10,3;CL:0000351,6.17e-10,3;CL:0000222,1.49e-09,7;CL:0000355,1.53e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!8.88e-08!9;UBERON:0002036!8.88e-08!9;UBERON:0002385!8.88e-08!9;UBERON:0000486!8.88e-08!9;UBERON:0001015!8.88e-08!9;UBERON:0004290!8.88e-08!9;UBERON:0003082!8.88e-08!9;UBERON:0005631!4.59e-07!3;UBERON:0000478!4.59e-07!3;UBERON:0000158!4.59e-07!3;UBERON:0000358!6.00e-07!3;UBERON:0000307!6.00e-07!3;UBERON:0000383!6.62e-07!10 | |ontology_enrichment_uberon=UBERON:0001134!8.88e-08!9;UBERON:0002036!8.88e-08!9;UBERON:0002385!8.88e-08!9;UBERON:0000486!8.88e-08!9;UBERON:0001015!8.88e-08!9;UBERON:0004290!8.88e-08!9;UBERON:0003082!8.88e-08!9;UBERON:0005631!4.59e-07!3;UBERON:0000478!4.59e-07!3;UBERON:0000158!4.59e-07!3;UBERON:0000358!6.00e-07!3;UBERON:0000307!6.00e-07!3;UBERON:0000383!6.62e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.05e-14,2;UBERON:0003124,1.05e-14,2;UBERON:0004340,1.05e-14,2;UBERON:0005631,4.07e-10,3;UBERON:0000478,4.07e-10,3;UBERON:0000158,4.07e-10,3;UBERON:0000358,6.17e-10,3;UBERON:0000307,6.17e-10,3;UBERON:0007010,6.17e-10,3;UBERON:0005795,8.35e-08,4;UBERON:0000995,8.35e-08,4;UBERON:0001134,1.53e-07,9;UBERON:0002036,1.53e-07,9;UBERON:0002385,1.53e-07,9;UBERON:0000486,1.53e-07,9;UBERON:0007503,1.53e-07,9;UBERON:0001015,1.53e-07,9;UBERON:0002329,1.53e-07,9;UBERON:0003082,1.53e-07,9;UBERON:0003059,1.53e-07,9;UBERON:0007282,1.53e-07,9;UBERON:0004290,1.53e-07,9;UBERON:0009618,1.53e-07,9;UBERON:0000383,7.76e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.917733760808408,0,0.218025156380447,2.19686182734472,2.3331587888914,0.139986421625363,0,0,0,0,23.4106086792712,1.43266719969378,8.25075347643908,0,0,0,0.338844532069132,0,1.3498495759221,6.92206453796882,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.377857800533928,0,0,4.75979933595425,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0.876767573733936,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,2.54198485036584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,1.55390167361845,0.897138566094757,3.18980771091749,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.917733760808408,0,0.218025156380447,2.19686182734472,2.3331587888914,0.139986421625363,0,0,0,0,23.4106086792712,1.43266719969378,8.25075347643908,0,0,0,0.338844532069132,0,1.3498495759221,6.92206453796882,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.377857800533928,0,0,4.75979933595425,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0.876767573733936,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,2.54198485036584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,1.55390167361845,0.897138566094757,3.18980771091749,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr5:137538855..137538875,- | |short_description=p@chr5:137538855..137538875,- | ||
}} | }} |
Latest revision as of 20:55, 3 August 2015
Short description: | p@chr5:137538855..137538875, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137538855..137538875, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.78e-21 | 3 |
striated muscle cell | 1.78e-21 | 3 |
cardiac muscle cell | 1.78e-21 | 3 |
cardiac muscle myoblast | 1.78e-21 | 3 |
astrocyte of the cerebral cortex | 2.29e-14 | 2 |
astrocyte of the hippocampus | 2.29e-14 | 2 |
muscle precursor cell | 4.72e-11 | 6 |
muscle cell | 4.72e-11 | 6 |
myoblast | 4.72e-11 | 6 |
bone marrow cell | 5.56e-10 | 3 |
mesenchymal stem cell of the bone marrow | 5.56e-10 | 3 |
extraembryonic cell | 6.17e-10 | 3 |
trophoblast cell | 6.17e-10 | 3 |
mesodermal cell | 1.49e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.05e-14 | 2 |
chorion | 1.05e-14 | 2 |
allantois | 1.05e-14 | 2 |
extraembryonic membrane | 4.07e-10 | 3 |
extraembryonic structure | 4.07e-10 | 3 |
membranous layer | 4.07e-10 | 3 |
blastocyst | 6.17e-10 | 3 |
blastula | 6.17e-10 | 3 |
cleaving embryo | 6.17e-10 | 3 |
embryonic uterus | 8.35e-08 | 4 |
uterus | 8.35e-08 | 4 |
skeletal muscle tissue | 1.53e-07 | 9 |
striated muscle tissue | 1.53e-07 | 9 |
muscle tissue | 1.53e-07 | 9 |
multilaminar epithelium | 1.53e-07 | 9 |
epithelial vesicle | 1.53e-07 | 9 |
musculature | 1.53e-07 | 9 |
somite | 1.53e-07 | 9 |
myotome | 1.53e-07 | 9 |
presomitic mesoderm | 1.53e-07 | 9 |
presumptive segmental plate | 1.53e-07 | 9 |
dermomyotome | 1.53e-07 | 9 |
trunk paraxial mesoderm | 1.53e-07 | 9 |
musculature of body | 7.76e-07 | 10 |