FFCP PHASE1:Mm9::chr5:137537796..137537800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137537796..137537800,- | |||
|description=CAGE_peak_at_chr5:137537796..137537800,- | |description=CAGE_peak_at_chr5:137537796..137537800,- | ||
|id=chr5:137537796..137537800,- | |id=chr5:137537796..137537800,- | ||
|ontology_enrichment_celltype=CL:0000680!4.65e-09!6;CL:0000183!4.65e-09!6;CL:0000187!4.65e-09!6;CL:0000056!4.65e-09!6;CL:0000222!1.41e-07!7 | |ontology_enrichment_celltype=CL:0000680!4.65e-09!6;CL:0000183!4.65e-09!6;CL:0000187!4.65e-09!6;CL:0000056!4.65e-09!6;CL:0000222!1.41e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.42e-23,6;CL:0000187,4.42e-23,6;CL:0000056,4.42e-23,6;CL:0000222,1.01e-19,7;CL:0000355,3.10e-15,9;CL:0002494,1.80e-13,3;CL:0000737,1.80e-13,3;CL:0000746,1.80e-13,3;CL:0000513,1.80e-13,3;CL:0000349,4.15e-13,3;CL:0000351,4.15e-13,3;CL:0002092,1.62e-12,3;CL:0002540,1.62e-12,3;CL:0000068,1.45e-11,3;CL:0002202,1.45e-11,3;CL:0000069,1.45e-11,3;CL:0002632,1.45e-11,3;CL:0002368,1.45e-11,3;CL:0000307,1.45e-11,3;CL:0000377,1.45e-11,3;CL:0000192,2.63e-11,3;CL:0000359,2.63e-11,3;CL:0002539,2.63e-11,3;CL:0000514,2.63e-11,3;CL:0002321,6.08e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.10e-15,9;UBERON:0002036,3.10e-15,9;UBERON:0002385,3.10e-15,9;UBERON:0000486,3.10e-15,9;UBERON:0007503,3.10e-15,9;UBERON:0001015,3.10e-15,9;UBERON:0002329,3.10e-15,9;UBERON:0003082,3.10e-15,9;UBERON:0003059,3.10e-15,9;UBERON:0007282,3.10e-15,9;UBERON:0004290,3.10e-15,9;UBERON:0009618,3.10e-15,9;UBERON:0000947,8.55e-15,4;UBERON:0001637,8.55e-15,4;UBERON:0004573,8.55e-15,4;UBERON:0003509,8.55e-15,4;UBERON:0004571,8.55e-15,4;UBERON:0010191,8.55e-15,4;UBERON:0004572,8.55e-15,4;UBERON:0000383,1.16e-13,10;UBERON:0000358,4.15e-13,3;UBERON:0000307,4.15e-13,3;UBERON:0007010,4.15e-13,3;UBERON:0005631,7.86e-13,3;UBERON:0000478,7.86e-13,3;UBERON:0000158,7.86e-13,3;UBERON:0007524,2.24e-12,11;UBERON:0003077,2.24e-12,11;UBERON:0007285,2.24e-12,11;UBERON:0000055,7.03e-12,5;UBERON:0007500,7.03e-12,5;UBERON:0001981,7.03e-12,5;UBERON:0002049,7.03e-12,5;UBERON:0007798,7.03e-12,5;UBERON:0004537,7.03e-12,5;UBERON:0006965,7.03e-12,5;UBERON:0003126,1.45e-11,3;UBERON:0001005,1.45e-11,3;UBERON:0007196,1.45e-11,3;UBERON:0001558,1.45e-11,3;UBERON:0001135,2.63e-11,3;UBERON:0004237,2.63e-11,3;UBERON:0004695,2.63e-11,3;UBERON:0002111,2.63e-11,3;UBERON:0004178,2.63e-11,3;UBERON:0001987,2.64e-09,2;UBERON:0003124,2.64e-09,2;UBERON:0004340,2.64e-09,2;UBERON:0002204,1.31e-08,32;UBERON:0004872,2.26e-08,33;UBERON:0004535,1.54e-07,23;UBERON:0001009,1.54e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.10128051297009,0,0,1.5378032791413,0.972149495371417,0,0,0,0,0,44.7631418702548,6.87680255853016,14.4388185837684,0,0,0,0.338844532069132,0,3.1496490104849,1.97773272513395,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0.453429360640713,0,0,2.719885334831,0,0,0,0,0.340860645156116,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,1.08245520505607,1.26679932737549,1.51657333504435,0.34255163915718,0.258937883647172,0,0,0,0.230615497256059,0,0,0,1.97755974187499,1.87979163995885,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.492502392237286,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,9.74427525973573,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88369097422942,3.40912655116008,11.0803846800292,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0.952587382566147,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.10128051297009,0,0,1.5378032791413,0.972149495371417,0,0,0,0,0,44.7631418702548,6.87680255853016,14.4388185837684,0,0,0,0.338844532069132,0,3.1496490104849,1.97773272513395,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0.453429360640713,0,0,2.719885334831,0,0,0,0,0.340860645156116,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,1.08245520505607,1.26679932737549,1.51657333504435,0.34255163915718,0.258937883647172,0,0,0,0.230615497256059,0,0,0,1.97755974187499,1.87979163995885,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.492502392237286,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,9.74427525973573,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88369097422942,3.40912655116008,11.0803846800292,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0.952587382566147,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr5:137537796..137537800,- | |short_description=p@chr5:137537796..137537800,- | ||
}} | }} |
Latest revision as of 20:54, 3 August 2015
Short description: | p@chr5:137537796..137537800, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137537796..137537800, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.42e-23 | 6 |
muscle cell | 4.42e-23 | 6 |
myoblast | 4.42e-23 | 6 |
mesodermal cell | 1.01e-19 | 7 |
multi-potent skeletal muscle stem cell | 3.10e-15 | 9 |
cardiocyte | 1.80e-13 | 3 |
striated muscle cell | 1.80e-13 | 3 |
cardiac muscle cell | 1.80e-13 | 3 |
cardiac muscle myoblast | 1.80e-13 | 3 |
extraembryonic cell | 4.15e-13 | 3 |
trophoblast cell | 4.15e-13 | 3 |
bone marrow cell | 1.62e-12 | 3 |
mesenchymal stem cell of the bone marrow | 1.62e-12 | 3 |
duct epithelial cell | 1.45e-11 | 3 |
epithelial cell of tracheobronchial tree | 1.45e-11 | 3 |
branched duct epithelial cell | 1.45e-11 | 3 |
epithelial cell of lower respiratory tract | 1.45e-11 | 3 |
respiratory epithelial cell | 1.45e-11 | 3 |
tracheal epithelial cell | 1.45e-11 | 3 |
tracheoblast | 1.45e-11 | 3 |
smooth muscle cell | 2.63e-11 | 3 |
vascular associated smooth muscle cell | 2.63e-11 | 3 |
aortic smooth muscle cell | 2.63e-11 | 3 |
smooth muscle myoblast | 2.63e-11 | 3 |
embryonic cell | 6.08e-07 | 70 |