FFCP PHASE1:Mm9::chr19:26845416..26845446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:26845416..26845446,+ | |||
|description=CAGE_peak_at_chr19:26845416..26845446,+ | |description=CAGE_peak_at_chr19:26845416..26845446,+ | ||
|id=chr19:26845416..26845446,+ | |id=chr19:26845416..26845446,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.01e-08!23;CL:0000337!5.01e-08!23 | |ontology_enrichment_celltype=CL:0000117!5.01e-08!23;CL:0000337!5.01e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.30e-09,23;CL:0000337,9.30e-09,23;CL:0002610,9.62e-09,3;CL:0002612,5.53e-08,3;CL:0002613,2.23e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.18e-12!50;UBERON:0006238!4.18e-12!50;UBERON:0002616!4.25e-12!49;UBERON:0001049!4.80e-12!52;UBERON:0005068!4.80e-12!52;UBERON:0006241!4.80e-12!52;UBERON:0007135!4.80e-12!52;UBERON:0002346!7.00e-11!71;UBERON:0003075!7.00e-11!71;UBERON:0007284!7.00e-11!71;UBERON:0000025!1.13e-10!114;UBERON:0000033!1.94e-10!63;UBERON:0002020!2.00e-10!34;UBERON:0003080!2.37e-10!40;UBERON:0002780!3.36e-10!39;UBERON:0001890!3.36e-10!39;UBERON:0006240!3.36e-10!39;UBERON:0003056!8.90e-10!49;UBERON:0004111!1.73e-09!122;UBERON:0001017!3.09e-09!73;UBERON:0005743!3.09e-09!73;UBERON:0002791!5.32e-09!29;UBERON:0003528!5.32e-09!29;UBERON:0001893!5.32e-09!29;UBERON:0000073!2.24e-08!75;UBERON:0001016!2.24e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.67e-13,34;UBERON:0000073,3.90e-12,54;UBERON:0003528,1.26e-09,29;UBERON:0002791,1.26e-09,29;UBERON:0001893,1.26e-09,29;UBERON:0002021,5.44e-09,10;UBERON:0000411,5.44e-09,10;UBERON:0001950,5.44e-09,10;UBERON:0004684,9.62e-09,3;UBERON:0002275,9.62e-09,3;UBERON:0001049,2.42e-08,52;UBERON:0005068,2.42e-08,52;UBERON:0006241,2.42e-08,52;UBERON:0007135,2.42e-08,52;UBERON:0002257,5.53e-08,3;UBERON:0001017,7.62e-08,73;UBERON:0001016,1.60e-07,75;UBERON:0000369,2.53e-07,5;UBERON:0002435,2.53e-07,5;UBERON:0000204,2.53e-07,5;UBERON:0010082,2.53e-07,5;UBERON:0000025,7.30e-07,114;UBERON:0002420,9.18e-07,8;UBERON:0007245,9.18e-07,8;UBERON:0010009,9.18e-07,8;UBERON:0010011,9.18e-07,8;UBERON:0000454,9.18e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,1.34437519656986,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0.622137673850866,0.945041568321835,0,0.285650984403804,0.220868540951614,0.979926393719632,0.287536413054709,0.919218786610021,2.20231761998777,3.70293280447044,3.84016333140609,1.58263545276233,1.55528994124096,1.04182674111352,0.558365998002762,0.56276261003168,1.22238598221448,1.76777151284201,1.56608848879013,1.67759501242771,0,0,0,0,0.679971333707751,0,1.29955283489534,1.79210754838934,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.22836775943812,0.258937883647172,0.445326417194474,0,0.913396434936424,0,0.301445281105245,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,1.17112318804619,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,1.13088916901578,0.521472960576829,0.767146371990992,0.62336413367868,0.973447578406546,0.916554274652847,0.124406970610093,0.252722758433675,0,0.910843100738926,0,0.360124259610698,0.60281927134286,0.204109497453984,0.512454881139399,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.697601834251224,0,0.233530684734339,0.16455984991348,0.492502392237286,0.324275238183423,0.438599962275997,0.439100230582101,0.134206418760372,0,1.54356918568927,0,0,0,0.464473343720877,0,0,0,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0,0.228497025219458,0,0.610953983535943,0.775809948670503,0.49095073923223,0.252946148497029,1.47610147979602,0.627994911365499,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,10.0637744569148,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.184753190166605,0,0.488894929326078,0.509235257325564,1.17345124144251,0,0.714130922658041,0,0.788175720530955,1.10732344824387,1.59454768657487,2.29408640602033,2.41758974612254,0.867894351489069,0,0,0,0,0.80275294993896,0.586058432961016,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.532020700926821,0.713475270408282,0.822745103010605,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,1.1659233465194,0.556275906031529,0,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.655087691238533,0.539457385539283,0.0826534557253359,0,0.388844919875379,0,3.94585057078933,0,0,0.194451188344048,0,1.01373675294467,0.821500670520278,0.911430693907651,0.419437377702843,2.65742532908607,1.72818003754719,0,0,0.308132871494482,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,6.21227026878773,3.22227665555024,2.86447756719698,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,4.65984280576638,0.415149390336707,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0,0.320919209591815,0.505394423527595,0,0,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,0.735994600671987,0.685738504770831,1.59728225543404,0.953744759789284,0.145346416632329,0.188218760830661,0.169229215783353,0.73171189149109,1.57841826862706,0.407412341537585,1.12228454331548,0,0.492522411877817,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 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|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,1.34437519656986,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0.622137673850866,0.945041568321835,0,0.285650984403804,0.220868540951614,0.979926393719632,0.287536413054709,0.919218786610021,2.20231761998777,3.70293280447044,3.84016333140609,1.58263545276233,1.55528994124096,1.04182674111352,0.558365998002762,0.56276261003168,1.22238598221448,1.76777151284201,1.56608848879013,1.67759501242771,0,0,0,0,0.679971333707751,0,1.29955283489534,1.79210754838934,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.22836775943812,0.258937883647172,0.445326417194474,0,0.913396434936424,0,0.301445281105245,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,1.17112318804619,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,1.13088916901578,0.521472960576829,0.767146371990992,0.62336413367868,0.973447578406546,0.916554274652847,0.124406970610093,0.252722758433675,0,0.910843100738926,0,0.360124259610698,0.60281927134286,0.204109497453984,0.512454881139399,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.697601834251224,0,0.233530684734339,0.16455984991348,0.492502392237286,0.324275238183423,0.438599962275997,0.439100230582101,0.134206418760372,0,1.54356918568927,0,0,0,0.464473343720877,0,0,0,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0,0.228497025219458,0,0.610953983535943,0.775809948670503,0.49095073923223,0.252946148497029,1.47610147979602,0.627994911365499,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,10.0637744569148,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.184753190166605,0,0.488894929326078,0.509235257325564,1.17345124144251,0,0.714130922658041,0,0.788175720530955,1.10732344824387,1.59454768657487,2.29408640602033,2.41758974612254,0.867894351489069,0,0,0,0,0.80275294993896,0.586058432961016,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.532020700926821,0.713475270408282,0.822745103010605,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,1.1659233465194,0.556275906031529,0,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.655087691238533,0.539457385539283,0.0826534557253359,0,0.388844919875379,0,3.94585057078933,0,0,0.194451188344048,0,1.01373675294467,0.821500670520278,0.911430693907651,0.419437377702843,2.65742532908607,1.72818003754719,0,0,0.308132871494482,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,6.21227026878773,3.22227665555024,2.86447756719698,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,4.65984280576638,0.415149390336707,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0,0.320919209591815,0.505394423527595,0,0,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,0.735994600671987,0.685738504770831,1.59728225543404,0.953744759789284,0.145346416632329,0.188218760830661,0.169229215783353,0.73171189149109,1.57841826862706,0.407412341537585,1.12228454331548,0,0.492522411877817,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:26845416..26845446,+ | |short_description=p@chr19:26845416..26845446,+ | ||
}} | }} |
Latest revision as of 20:03, 3 August 2015
Short description: | p@chr19:26845416..26845446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:26845416..26845446, + |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.30e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.30e-09 | 23 |
raphe nuclei neuron | 9.62e-09 | 3 |
neuron of the ventral spinal cord | 5.53e-08 | 3 |
striatum neuron | 2.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.67e-13 | 34 |
regional part of nervous system | 3.90e-12 | 54 |
brain grey matter | 1.26e-09 | 29 |
regional part of telencephalon | 1.26e-09 | 29 |
telencephalon | 1.26e-09 | 29 |
occipital lobe | 5.44e-09 | 10 |
visual cortex | 5.44e-09 | 10 |
neocortex | 5.44e-09 | 10 |
raphe nuclei | 9.62e-09 | 3 |
reticular formation | 9.62e-09 | 3 |
neural tube | 2.42e-08 | 52 |
neural rod | 2.42e-08 | 52 |
future spinal cord | 2.42e-08 | 52 |
neural keel | 2.42e-08 | 52 |
ventral horn of spinal cord | 5.53e-08 | 3 |
central nervous system | 7.62e-08 | 73 |
nervous system | 1.60e-07 | 75 |
corpus striatum | 2.53e-07 | 5 |
striatum | 2.53e-07 | 5 |
ventral part of telencephalon | 2.53e-07 | 5 |
future corpus striatum | 2.53e-07 | 5 |
tube | 7.30e-07 | 114 |
basal ganglion | 9.18e-07 | 8 |
nuclear complex of neuraxis | 9.18e-07 | 8 |
aggregate regional part of brain | 9.18e-07 | 8 |
collection of basal ganglia | 9.18e-07 | 8 |
cerebral subcortex | 9.18e-07 | 8 |