FFCP PHASE1:Mm9::chr8:46020507..46020526,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1948 | |MCL_coexpression_id=1948 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:46020507..46020526,- | |||
|description=CAGE_peak_at_chr8:46020507..46020526,- | |description=CAGE_peak_at_chr8:46020507..46020526,- | ||
|id=chr8:46020507..46020526,- | |id=chr8:46020507..46020526,- | ||
|ontology_enrichment_celltype=CL:0002563!7.14e-07!9;CL:0002251!7.14e-07!9 | |ontology_enrichment_celltype=CL:0002563!7.14e-07!9;CL:0002251!7.14e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.74e-10,15;CL:0002563,2.36e-09,9;CL:0002251,2.36e-09,9;CL:0000066,2.48e-09,25;CL:0000075,1.41e-07,7;CL:0000239,2.07e-07,6;CL:0000677,2.07e-07,6;CL:0000584,2.07e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.66e-10!15;UBERON:0001242!3.18e-09!13;UBERON:0000060!3.18e-09!13;UBERON:0001262!3.18e-09!13;UBERON:0004786!3.18e-09!13;UBERON:0005409!4.74e-08!59;UBERON:0000160!6.67e-08!43;UBERON:0000485!4.64e-07!11;UBERON:0003350!7.14e-07!9;UBERON:0004808!7.14e-07!9;UBERON:0001277!7.14e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!1.66e-10!15;UBERON:0001242!3.18e-09!13;UBERON:0000060!3.18e-09!13;UBERON:0001262!3.18e-09!13;UBERON:0004786!3.18e-09!13;UBERON:0005409!4.74e-08!59;UBERON:0000160!6.67e-08!43;UBERON:0000485!4.64e-07!11;UBERON:0003350!7.14e-07!9;UBERON:0004808!7.14e-07!9;UBERON:0001277!7.14e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.71e-17,47;UBERON:0000160,9.32e-17,31;UBERON:0000344,1.15e-14,15;UBERON:0001242,8.67e-13,13;UBERON:0001262,8.67e-13,13;UBERON:0004786,8.67e-13,13;UBERON:0000485,1.26e-09,11;UBERON:0003350,2.36e-09,9;UBERON:0004808,2.36e-09,9;UBERON:0001277,2.36e-09,9;UBERON:0004923,7.37e-08,24 | |||
|phase1_expression=1.12104192973356,6.63053274514786,6.82498859084304,6.65421264875026,10.5188103288733,6.71517087647559,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,4.31979541542198,5.27641346454491,3.44539178469012,4.30761996159075,3.44753972297422,3.04037471130198,2.26827116783938,6.43018480900384,0,0,0,2.02196133825892,3.15845826181135,1.83752420636132,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.917733760808408,0,1.09012578190223,0.878744730937887,2.3331587888914,0.699932108126813,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,0,0.202316460859598,1.05798195854407,0.633831403506179,1.35537812827653,0,1.3498495759221,1.97773272513395,0,0.599200221036809,2.68952813725088,0.207379224616955,0,0,0.571301968807607,1.32521124570968,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.263772575460388,0.457438218012048,0,1.11673199600552,0.56276261003168,0.61119299110724,0.294628585473668,1.42371680799103,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0,2.55645483867087,5.45550609666024,2.82671659608272,1.26759077799012,1.28326477414318,0,0,8.87613268145978,10.387754484479,8.59391556525132,0.68510327831436,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,1.23597483867187,0.433798070759735,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,1.17112318804619,1.67557365450764,2.81002760729451,0,0,0,0.449371918214468,0,0,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,1.2220723662038,1.11966273549084,3.28539585963777,0.210441855886474,2.99277018814219,0.459804208866946,1.26043490863744,1.35634336052144,2.4493139694478,1.2811372028485,1.03071897015702,0.517406741478031,0.646703978798527,1.70195472151037,1.40760899331159,0.43839146485515,0.834141747676794,1.74126083261083,1.02891068203972,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,1.44049649168812,0.473489471170421,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,0.102904612379284,8.59088835757875,2.64450566663544,1.2797295032114,0.928946687441754,0.257734922644187,0.201683524623343,1.33426826306922,1.33157938278791,1.42358718463353,1.4822905925161,2.76468729680296,0.994782360205754,1.55971269695296,2.69645822596266,2.80979464837102,2.38969527905241,0.569003702859245,1.14248512609729,1.1270773567308,1.22190796707189,2.71533482034676,1.26244475802573,1.20149420536089,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.757965647081939,0.325929952884052,1.35796068620151,0.938760993154008,1.00503754465089,1.6663054862021,1.56106918286239,0.630540576424764,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,0.891194696329576,0,1.21443210502468,2.04579100537918,2.37172666767914,0,0.425820255624806,0.534196811001766,0.162886959353576,0.164970122972535,0,1.45668381692989,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,0,0.727067458955011,0,0,0,0,0.680879211507576,1.62054984628179,2.19909762430683,1.50035924522115,1.95074257006501,1.60531935841864,1.97458824722545,0.913394847343798,0,0.847328283455281,0.441056796109924,2.30840754118072,0.645857706783622,1.02531972377865,1.43246812803764,2.29797259643086,1.45740418314925,0,0,0.619160603889667,0,0,0,0,0,0,0,2.86401185404534,2.37251995185852,1.21991680276109,1.40406943068342,1.25452977608681,2.40198820120795,1.34864346384821,1.65306911450672,0.523511883968059,3.75883422546199,0,0,0.897099276263873,1.32366792365678,0.777804753376191,0.774958940866387,0.168956125490778,0.352071715937262,0.651021924219751,0.629156066554265,0.241584120826006,0,0,1.21635129174099,0.616265742988964,0.129920822977795,0.358053391334963,0.79472541912506,0.120195449519969,0.295379054349154,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0.221985953374065,1.16628013592318,0.503653849092235,0.965947970160952,0,0,3.85863082342319,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,1.21553358534147,0,0.919217542250071,0.44449345560323,2.26638562962784,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,0.655490552289177,0.512201219238954,0.402048282689293,1.42888107384922,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,0,0.887379030796687,1.1921809497366,0.726732083161643,0.564656282491984,0.676916863133412,0.914639864363863,0.526139422875686,0.407412341537585,0,0.474540072496697,0.788035859004508,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.935726433781634,0.429742108096597,0,0.441182838239031,0.695603506861264 | |phase1_expression=1.12104192973356,6.63053274514786,6.82498859084304,6.65421264875026,10.5188103288733,6.71517087647559,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,4.31979541542198,5.27641346454491,3.44539178469012,4.30761996159075,3.44753972297422,3.04037471130198,2.26827116783938,6.43018480900384,0,0,0,2.02196133825892,3.15845826181135,1.83752420636132,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.917733760808408,0,1.09012578190223,0.878744730937887,2.3331587888914,0.699932108126813,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,0,0.202316460859598,1.05798195854407,0.633831403506179,1.35537812827653,0,1.3498495759221,1.97773272513395,0,0.599200221036809,2.68952813725088,0.207379224616955,0,0,0.571301968807607,1.32521124570968,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.263772575460388,0.457438218012048,0,1.11673199600552,0.56276261003168,0.61119299110724,0.294628585473668,1.42371680799103,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0,2.55645483867087,5.45550609666024,2.82671659608272,1.26759077799012,1.28326477414318,0,0,8.87613268145978,10.387754484479,8.59391556525132,0.68510327831436,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,1.23597483867187,0.433798070759735,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,1.17112318804619,1.67557365450764,2.81002760729451,0,0,0,0.449371918214468,0,0,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,1.2220723662038,1.11966273549084,3.28539585963777,0.210441855886474,2.99277018814219,0.459804208866946,1.26043490863744,1.35634336052144,2.4493139694478,1.2811372028485,1.03071897015702,0.517406741478031,0.646703978798527,1.70195472151037,1.40760899331159,0.43839146485515,0.834141747676794,1.74126083261083,1.02891068203972,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,1.44049649168812,0.473489471170421,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,0.102904612379284,8.59088835757875,2.64450566663544,1.2797295032114,0.928946687441754,0.257734922644187,0.201683524623343,1.33426826306922,1.33157938278791,1.42358718463353,1.4822905925161,2.76468729680296,0.994782360205754,1.55971269695296,2.69645822596266,2.80979464837102,2.38969527905241,0.569003702859245,1.14248512609729,1.1270773567308,1.22190796707189,2.71533482034676,1.26244475802573,1.20149420536089,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.757965647081939,0.325929952884052,1.35796068620151,0.938760993154008,1.00503754465089,1.6663054862021,1.56106918286239,0.630540576424764,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,0.891194696329576,0,1.21443210502468,2.04579100537918,2.37172666767914,0,0.425820255624806,0.534196811001766,0.162886959353576,0.164970122972535,0,1.45668381692989,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,0,0.727067458955011,0,0,0,0,0.680879211507576,1.62054984628179,2.19909762430683,1.50035924522115,1.95074257006501,1.60531935841864,1.97458824722545,0.913394847343798,0,0.847328283455281,0.441056796109924,2.30840754118072,0.645857706783622,1.02531972377865,1.43246812803764,2.29797259643086,1.45740418314925,0,0,0.619160603889667,0,0,0,0,0,0,0,2.86401185404534,2.37251995185852,1.21991680276109,1.40406943068342,1.25452977608681,2.40198820120795,1.34864346384821,1.65306911450672,0.523511883968059,3.75883422546199,0,0,0.897099276263873,1.32366792365678,0.777804753376191,0.774958940866387,0.168956125490778,0.352071715937262,0.651021924219751,0.629156066554265,0.241584120826006,0,0,1.21635129174099,0.616265742988964,0.129920822977795,0.358053391334963,0.79472541912506,0.120195449519969,0.295379054349154,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0.221985953374065,1.16628013592318,0.503653849092235,0.965947970160952,0,0,3.85863082342319,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,1.21553358534147,0,0.919217542250071,0.44449345560323,2.26638562962784,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,0.655490552289177,0.512201219238954,0.402048282689293,1.42888107384922,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,0,0.887379030796687,1.1921809497366,0.726732083161643,0.564656282491984,0.676916863133412,0.914639864363863,0.526139422875686,0.407412341537585,0,0.474540072496697,0.788035859004508,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.935726433781634,0.429742108096597,0,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr8:46020507..46020526,- | |short_description=p@chr8:46020507..46020526,- | ||
}} | }} |
Latest revision as of 19:57, 3 August 2015
Short description: | p@chr8:46020507..46020526, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:46020507..46020526, - |
Coexpression cluster: | MCL_coexpression_mm9:1948 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.74e-10 | 15 |
intestinal epithelial cell | 2.36e-09 | 9 |
epithelial cell of alimentary canal | 2.36e-09 | 9 |
epithelial cell | 2.48e-09 | 25 |
columnar/cuboidal epithelial cell | 1.41e-07 | 7 |
brush border epithelial cell | 2.07e-07 | 6 |
gut absorptive cell | 2.07e-07 | 6 |
enterocyte | 2.07e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.71e-17 | 47 |
intestine | 9.32e-17 | 31 |
mucosa | 1.15e-14 | 15 |
intestinal mucosa | 8.67e-13 | 13 |
wall of intestine | 8.67e-13 | 13 |
gastrointestinal system mucosa | 8.67e-13 | 13 |
simple columnar epithelium | 1.26e-09 | 11 |
epithelium of mucosa | 2.36e-09 | 9 |
gastrointestinal system epithelium | 2.36e-09 | 9 |
intestinal epithelium | 2.36e-09 | 9 |
organ component layer | 7.37e-08 | 24 |