FFCP PHASE1:Hg19::chrX:86983685..86983696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:86983685..86983696,- | |||
|description=CAGE_peak_at_chrX:86983685..86983696,- | |description=CAGE_peak_at_chrX:86983685..86983696,- | ||
|id=chrX:86983685..86983696,- | |id=chrX:86983685..86983696,- | ||
|ontology_enrichment_celltype=CL:0002322!1.32e-13!5;CL:0000066!5.13e-11!254;CL:0002150!4.28e-10!3;CL:0000861!4.28e-10!3 | |ontology_enrichment_celltype=CL:0002322!1.32e-13!5;CL:0000066!5.13e-11!254;CL:0002150!4.28e-10!3;CL:0000861!4.28e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.39e-08;3!CL:0000319;4.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.24e-08,3;CL:0000066,1.46e-08,253;CL:0000319,5.84e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.30e-23;29!UBERON:0007123;1.42e-11;5!UBERON:0006595;1.24e-08;86 | |||
|ontology_enrichment_disease=DOID:162!1.50e-33!235;DOID:14566!1.49e-32!239;DOID:305!4.13e-30!106;DOID:0050687!4.82e-30!143;DOID:0050686!9.39e-10!137;DOID:1036!1.05e-08!8;DOID:299!6.96e-08!25;DOID:4468!4.84e-07!2 | |ontology_enrichment_disease=DOID:162!1.50e-33!235;DOID:14566!1.49e-32!239;DOID:305!4.13e-30!106;DOID:0050687!4.82e-30!143;DOID:0050686!9.39e-10!137;DOID:1036!1.05e-08!8;DOID:299!6.96e-08!25;DOID:4468!4.84e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:299;6.01e-08;25!DOID:3151;2.03e-07;1!DOID:5662;2.03e-07;1!DOID:3149;2.03e-07;1!DOID:305;3.22e-07;106!DOID:3030;4.74e-07;1!DOID:3112;4.74e-07;1!DOID:1036;5.57e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.36e-25,106;DOID:0050687,6.18e-23,143;DOID:162,4.98e-20,235;DOID:14566,1.71e-19,239;DOID:299,5.90e-08,25;DOID:3151,1.74e-07,1;DOID:3149,1.74e-07,1;DOID:5662,2.52e-07,1;DOID:3112,4.34e-07,1;DOID:3030,5.84e-07,1;DOID:1036,6.66e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.18e-26!9;UBERON:0001557!1.32e-11!19;UBERON:0008947!1.52e-10!38;UBERON:0003258!1.52e-10!38;UBERON:0000072!3.50e-08!46 | |ontology_enrichment_uberon=UBERON:0001737!1.18e-26!9;UBERON:0001557!1.32e-11!19;UBERON:0008947!1.52e-10!38;UBERON:0003258!1.52e-10!38;UBERON:0000072!3.50e-08!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.40e-51;9!UBERON:0001557;1.40e-51;9!UBERON:0000072;6.12e-15;37!UBERON:0002046;1.42e-11;5!UBERON:0000065;1.86e-11;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.61e-52,9;UBERON:0001557,7.12e-24,19;UBERON:0008947,5.34e-17,38;UBERON:0003258,5.34e-17,38;UBERON:0000072,2.39e-13,47;UBERON:0002046,1.35e-11,5;UBERON:0004117,1.35e-11,5;UBERON:0007689,1.35e-11,5;UBERON:0007123,1.35e-11,5;UBERON:0003091,1.35e-11,5;UBERON:0000065,2.37e-11,54;UBERON:0001041,1.56e-10,87;UBERON:0001007,3.01e-08,145;UBERON:0001555,3.01e-08,145;UBERON:0007026,3.01e-08,145;UBERON:0004119,3.18e-08,160;UBERON:0000925,3.18e-08,160;UBERON:0006595,3.18e-08,160;UBERON:0001004,9.72e-08,74;UBERON:0004921,5.77e-07,118 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.132529768321485,0.69716365721711,0.310983165046111,1.26160425437814,0,0,0,0,0,0,2.72105640091641,1.68584690078102,1.44606617930089,2.42646740011267,1.96091499683166,2.13543557199987,2.83145747136345,2.35465758150415,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67496561096205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,12.0921694506079,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0.451191321234361,1.76456280885966,1.00692952185506,1.13852239634511,0,2.53197677433632,0.979396848954886,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,2.22539561964896,3.43519790305072,1.64230914106418,0,0,0,0,0,0,0,0.801588202515337,0,1.9980960958213,0,0,0.514784993585894,0,0,0,0.67952103036807,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0.412618309791701,0,0,0,0,2.68347750079413,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,1.35974509824151,0,0,0,0,0,7.04815022316672,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.999843263696853,2.72968411574966,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,1.2288645437686,0,0,0,0.172214979660816,3.97261167496785,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,1.47394725759087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.17780280338292,0,0,0,0,0,1.16969731731053,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,0,1.28652859348783,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,3.92461519032147,0,0,0,0,0,0,0,0.0814032686109745,2.24127426343202,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:86983685..86983696,- | |short_description=p@chrX:86983685..86983696,- | ||
}} | }} |
Latest revision as of 09:49, 1 August 2015
Short description: | p@chrX:86983685..86983696, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:86983685..86983696, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.24e-08 | 3 |
epithelial cell | 1.46e-08 | 253 |
mucus secreting cell | 5.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.61e-52 | 9 |
upper respiratory tract | 7.12e-24 | 19 |
respiratory primordium | 5.34e-17 | 38 |
endoderm of foregut | 5.34e-17 | 38 |
segment of respiratory tract | 2.39e-13 | 47 |
thyroid gland | 1.35e-11 | 5 |
pharyngeal pouch | 1.35e-11 | 5 |
thyroid diverticulum | 1.35e-11 | 5 |
pharyngeal pouch 2 | 1.35e-11 | 5 |
thyroid primordium | 1.35e-11 | 5 |
respiratory tract | 2.37e-11 | 54 |
foregut | 1.56e-10 | 87 |
digestive system | 3.01e-08 | 145 |
digestive tract | 3.01e-08 | 145 |
primitive gut | 3.01e-08 | 145 |
endoderm-derived structure | 3.18e-08 | 160 |
endoderm | 3.18e-08 | 160 |
presumptive endoderm | 3.18e-08 | 160 |
respiratory system | 9.72e-08 | 74 |
subdivision of digestive tract | 5.77e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.36e-25 | 106 |
cell type cancer | 6.18e-23 | 143 |
cancer | 4.98e-20 | 235 |
disease of cellular proliferation | 1.71e-19 | 239 |
adenocarcinoma | 5.90e-08 | 25 |
skin squamous cell carcinoma | 1.74e-07 | 1 |
keratoacanthoma | 1.74e-07 | 1 |
pleomorphic carcinoma | 2.52e-07 | 1 |
papillary adenocarcinoma | 4.34e-07 | 1 |
mucinous adenocarcinoma | 5.84e-07 | 1 |
chronic leukemia | 6.66e-07 | 8 |