FFCP PHASE1:Hg19::chrX:86868675..86868686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:86868675..86868686,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chrX:86868675..86868686,+ | |description=CAGE_peak_at_chrX:86868675..86868686,+ | ||
|id=chrX:86868675..86868686,+ | |id=chrX:86868675..86868686,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.09e-45!3;CL:0000861!3.09e-45!3;CL:0000235!4.21e-14!10;CL:0000066!4.76e-09!254 | |ontology_enrichment_celltype=CL:0002150!3.09e-45!3;CL:0000861!3.09e-45!3;CL:0000235!4.21e-14!10;CL:0000066!4.76e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.00e-54;29!UBERON:0006595;1.10e-08;86 | |||
|ontology_enrichment_disease=DOID:305!2.95e-23!106;DOID:0050687!5.65e-17!143;DOID:3112!1.93e-16!1;DOID:162!7.82e-10!235;DOID:14566!1.33e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3112;9.43e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.43e-21,1;DOID:305,2.88e-18,106;DOID:0050687,1.96e-13,143;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.39e-136!9;UBERON:0001557!1.70e-64!19;UBERON:0008947!5.59e-32!38;UBERON:0003258!5.59e-32!38;UBERON:0000072!2.62e-26!46;UBERON:0000065!9.57e-23!53;UBERON:0001004!1.49e-16!72;UBERON:0000063!4.38e-12!97;UBERON:0001041!5.94e-12!98;UBERON:0001007!6.34e-09!155;UBERON:0001555!6.34e-09!155;UBERON:0007026!6.34e-09!155;UBERON:0000077!8.44e-09!130;UBERON:0004921!8.44e-09!129;UBERON:0004185!8.44e-09!129;UBERON:0001048!3.27e-08!168;UBERON:0004119!4.20e-08!169;UBERON:0000925!4.20e-08!169;UBERON:0006595!4.20e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.87e-176;9!UBERON:0001557;2.87e-176;9!UBERON:0000072;1.04e-39;37!UBERON:0000065;1.51e-33;44!UBERON:0001004;1.62e-17;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-176,9;UBERON:0001557,1.52e-83,19;UBERON:0008947,9.73e-42,38;UBERON:0003258,9.73e-42,38;UBERON:0000072,1.03e-33,47;UBERON:0000065,2.57e-29,54;UBERON:0001004,2.54e-21,74;UBERON:0001041,4.35e-18,87;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0004921,4.04e-13,118;UBERON:0001048,5.87e-12,160;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160 | |||
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|short_description=p@chrX:86868675..86868686,+ | |short_description=p@chrX:86868675..86868686,+ | ||
}} | }} |
Latest revision as of 09:49, 1 August 2015
Short description: | p@chrX:86868675..86868686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:86868675..86868686, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.87e-176 | 9 |
upper respiratory tract | 1.52e-83 | 19 |
respiratory primordium | 9.73e-42 | 38 |
endoderm of foregut | 9.73e-42 | 38 |
segment of respiratory tract | 1.03e-33 | 47 |
respiratory tract | 2.57e-29 | 54 |
respiratory system | 2.54e-21 | 74 |
foregut | 4.35e-18 | 87 |
digestive system | 3.78e-13 | 145 |
digestive tract | 3.78e-13 | 145 |
primitive gut | 3.78e-13 | 145 |
subdivision of digestive tract | 4.04e-13 | 118 |
primordium | 5.87e-12 | 160 |
endoderm-derived structure | 7.01e-12 | 160 |
endoderm | 7.01e-12 | 160 |
presumptive endoderm | 7.01e-12 | 160 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.43e-21 | 1 |
carcinoma | 2.88e-18 | 106 |
cell type cancer | 1.96e-13 | 143 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |