FFCP PHASE1:Hg19::chrX:119670813..119670833,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:119670813..119670833,- | |||
|description=CAGE_peak_at_chrX:119670813..119670833,- | |description=CAGE_peak_at_chrX:119670813..119670833,- | ||
|id=chrX:119670813..119670833,- | |id=chrX:119670813..119670833,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002602;1.10e-14;2!CL:0000746;7.28e-10;3!CL:0002564;8.49e-10;3!CL:0002379;3.42e-08;1!CL:0000737;1.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.35e-14,2;CL:0002564,6.55e-10,3;CL:0000746,7.47e-10,3;CL:0000513,7.47e-10,3;CL:0002379,3.10e-08,1;CL:0000737,1.35e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;7.28e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.42e-08;1!DOID:3565;3.42e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.10e-08,1;DOID:3565,3.10e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;9.20e-22;5!UBERON:0002216;9.20e-22;5!UBERON:0011134;9.20e-22;5!UBERON:0002209;9.20e-22;5!UBERON:0002213;9.20e-22;5!UBERON:0007844;9.20e-22;5!UBERON:0011138;9.20e-22;5!UBERON:0001130;9.20e-22;5!UBERON:0001066;9.20e-22;5!UBERON:0001468;9.20e-22;5!UBERON:0006444;1.10e-14;2!UBERON:0001995;1.10e-14;2!UBERON:0004715;1.10e-14;2!UBERON:0004905;1.14e-13;8!UBERON:0000982;1.14e-13;8!UBERON:0004770;1.14e-13;8!UBERON:0002418;4.38e-10;3!UBERON:0004755;4.38e-10;3!UBERON:0002242;8.49e-10;3!UBERON:0000075;7.01e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.92e-22,5;UBERON:0002216,7.92e-22,5;UBERON:0011134,7.92e-22,5;UBERON:0002209,7.92e-22,5;UBERON:0002213,7.92e-22,5;UBERON:0005856,7.92e-22,5;UBERON:0005866,7.92e-22,5;UBERON:0005863,7.92e-22,5;UBERON:0007844,7.92e-22,5;UBERON:0011138,7.92e-22,5;UBERON:0001130,7.92e-22,5;UBERON:0001066,7.92e-22,5;UBERON:0001468,7.92e-22,5;UBERON:0006444,1.35e-14,2;UBERON:0001995,1.35e-14,2;UBERON:0004715,1.35e-14,2;UBERON:0004905,1.04e-13,8;UBERON:0000982,1.04e-13,8;UBERON:0004770,1.04e-13,8;UBERON:0002418,5.02e-10,3;UBERON:0004755,5.02e-10,3;UBERON:0002242,6.55e-10,3;UBERON:0003068,6.55e-10,3;UBERON:0002328,6.55e-10,3;UBERON:0004880,6.55e-10,3;UBERON:0000075,6.71e-07,16 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,2.10402800032079,2.31978163009541,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0,0,0.572471974262113,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0.167186495390678,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,4.87613732627923,1.34140171940727,0.12786256184353,0.361439152384566,1.00267582127178,1.88300474649071,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0.49333509683432,0,0.269421344139376,0.326923806226917,0,1.15235184896,0,0,0,0.896692083310806,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0.640672166455702,1.05965950579781,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0.757301322732344,0.368199594569197,0.161646056818812,0.355009592516614,0.201504196455281,0.508681776931463,0.193260853163297,0,0.573609190778008,0.243947412259191,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,1.85747171212792,0.721879481669586,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.474541238222193,0.404493924480493,0.98110732562673,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0.857867961948885,0,0,0.977208552881205,0,0.791951872933429,0,0,1.09970290300263,0,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0.637938751653163,1.49801404789436,0,0,2.69921281782108,1.50051156317903,0.271265023699736,1.45579603071565,1.60586089917446,0.788512075169673,0.234282829985426,0,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0.640695746278505,0.511707249066704,0,0,0,0.355123450626254,0.0821271560138091,0,0.581051892299796,0.241718899183244,0.200506470303285,0.276242966807689,0.114814448164607,0.546273504020151,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0.616194468458578,0.307007349452259,0.137836572484531,0.107420244868274,0.725083469571143,0.426133137080504,0,0.330569830721956,0,0,0,2.32422774648643,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,1.58510321173008,0.421258456238981,0,0.731140468893853,2.11300293513511,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0.885741385813839,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0.31900115973192,0.183195186803725,0,1.02193298195737,0,0,0.225595660617181,0,0,0.569261198172555,0,0.632994193584081,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0.343972064943233,0.19351266257817,0.219267951258557,0.08211545705320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| ||
|short_description=p@chrX:119670813..119670833,- | |short_description=p@chrX:119670813..119670833,- | ||
}} | }} |
Latest revision as of 05:23, 1 August 2015
Short description: | p@chrX:119670813..119670833, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:119670813..119670833, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.35e-14 | 2 |
nucleus pulposus cell of intervertebral disc | 6.55e-10 | 3 |
cardiac muscle cell | 7.47e-10 | 3 |
cardiac muscle myoblast | 7.47e-10 | 3 |
meningothelial cell | 3.10e-08 | 1 |
striated muscle cell | 1.35e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 7.92e-22 | 5 |
symphysis | 7.92e-22 | 5 |
nonsynovial joint | 7.92e-22 | 5 |
fibrous joint | 7.92e-22 | 5 |
cartilaginous joint | 7.92e-22 | 5 |
developing mesenchymal condensation | 7.92e-22 | 5 |
pre-cartilage condensation | 7.92e-22 | 5 |
cartilaginous condensation | 7.92e-22 | 5 |
cartilage element | 7.92e-22 | 5 |
post-cranial axial skeletal system | 7.92e-22 | 5 |
vertebral column | 7.92e-22 | 5 |
intervertebral disk | 7.92e-22 | 5 |
intervertebral joint | 7.92e-22 | 5 |
annulus fibrosus | 1.35e-14 | 2 |
fibrocartilage | 1.35e-14 | 2 |
annulus fibrosus disci intervertebralis | 1.35e-14 | 2 |
articulation | 1.04e-13 | 8 |
skeletal joint | 1.04e-13 | 8 |
articular system | 1.04e-13 | 8 |
cartilage tissue | 5.02e-10 | 3 |
skeletal tissue | 5.02e-10 | 3 |
nucleus pulposus | 6.55e-10 | 3 |
axial mesoderm | 6.55e-10 | 3 |
notochord | 6.55e-10 | 3 |
chordamesoderm | 6.55e-10 | 3 |
subdivision of skeletal system | 6.71e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.10e-08 | 1 |
meningioma | 3.10e-08 | 1 |