FFCP PHASE1:Hg19::chrX:106198311..106198340,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chrX:106198311..106198340,- to FFCP PHASE1:Hg19::chrX:106198311..106198340,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:106198311..106198340,- | |||
|description=CAGE_peak_at_chrX:106198311..106198340,- | |||
|id=chrX:106198311..106198340,- | |||
|ontology_enrichment_celltype=CL:0000181!7.93e-10!12;CL:0000417!7.93e-10!12;CL:0000668!7.93e-10!12;CL:0000414!7.93e-10!12;CL:0000412!7.93e-10!12;CL:0000182!7.93e-10!12;CL:0000359!7.11e-09!32;CL:0000064!3.95e-07!3;CL:0005012!3.95e-07!3;CL:0000067!3.95e-07!3;CL:0002304!3.95e-07!3;CL:0000220!6.72e-07!246;CL:0000708!7.89e-07!3;CL:0000192!8.92e-07!42;CL:0000514!8.92e-07!42;CL:0002321!9.54e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.06e-28;12!CL:0000064;2.91e-22;3!CL:0000067;2.91e-22;3!CL:0005012;2.91e-22;3!CL:0002304;2.91e-22;3!CL:0002602;6.13e-15;2!CL:0000075;2.67e-09;27!CL:0002379;5.59e-09;1!CL:0000342;7.01e-09;1!CL:0002565;7.01e-09;1!CL:0000306;2.29e-08;4!CL:0002222;2.29e-08;4!CL:0002224;2.29e-08;4!CL:0002568;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-28,12;CL:0000064,2.26e-22,3;CL:0000067,2.26e-22,3;CL:0005012,2.26e-22,3;CL:0002304,2.26e-22,3;CL:0002602,2.99e-15,2;CL:0000075,2.61e-09,27;CL:0002379,5.59e-09,1;CL:0000342,6.50e-09,1;CL:0002565,6.50e-09,1;CL:0000223,1.43e-08,58;CL:0000306,2.47e-08,4;CL:0002222,2.47e-08,4;CL:0002224,2.47e-08,4;CL:0002568,2.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.35e-16;11!UBERON:0009497;8.14e-14;13!UBERON:0001041;3.72e-08;30!UBERON:0003104;1.08e-07;31!CL:0000223;9.64e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;5.59e-09;1!DOID:3565;5.59e-09;1!DOID:5662;2.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,5.59e-09,1;DOID:3565,5.59e-09,1;DOID:5662,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.39e-10!11;UBERON:0006876!1.39e-10!11;UBERON:0007499!1.70e-10!25;UBERON:0008835!1.94e-10!22;UBERON:0003894!1.94e-10!22;UBERON:0009856!5.89e-10!26;UBERON:0009854!7.60e-10!23;UBERON:0000490!1.95e-09!138;UBERON:0000481!2.54e-09!347;UBERON:0005256!3.75e-09!143;UBERON:0000488!4.83e-09!4;UBERON:0009497!8.34e-09!25;UBERON:0000015!8.34e-09!25;UBERON:0002423!8.34e-09!25;UBERON:0006235!8.34e-09!25;UBERON:0004161!8.34e-09!25;UBERON:0003929!1.10e-08!54;UBERON:0007625!1.80e-08!11;UBERON:0000477!6.68e-08!286;UBERON:0003914!6.93e-08!118;UBERON:0005911!3.19e-07!82;UBERON:0002107!3.83e-07!19;UBERON:0006925!3.83e-07!19;UBERON:0008836!3.83e-07!19;UBERON:0001778!3.95e-07!3;UBERON:0001775!3.95e-07!3;UBERON:0003210!7.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.24e-29;4!UBERON:0007625;1.65e-23;11!UBERON:0002107;2.42e-23;19!UBERON:0006925;2.42e-23;19!UBERON:0001778;2.91e-22;3!UBERON:0001775;2.91e-22;3!UBERON:0002203;1.12e-19;6!UBERON:0001768;1.12e-19;6!UBERON:0002200;1.12e-19;6!UBERON:0001801;2.25e-18;14!UBERON:0002423;1.76e-17;25!UBERON:0006876;1.70e-16;11!UBERON:0006444;6.13e-15;2!UBERON:0001995;6.13e-15;2!UBERON:0004715;6.13e-15;2!UBERON:0002365;1.01e-13;31!UBERON:0002330;1.01e-13;31!UBERON:0000019;2.07e-13;19!UBERON:0000047;2.07e-13;19!UBERON:0004088;2.07e-13;19!UBERON:0010230;2.07e-13;19!UBERON:0000970;1.03e-12;20!UBERON:0002104;4.39e-12;21!UBERON:0001456;4.39e-12;21!UBERON:0002368;8.22e-12;33!UBERON:0000020;5.48e-11;23!UBERON:0001032;1.65e-10;24!UBERON:0004456;1.65e-10;24!UBERON:0002418;2.87e-10;3!UBERON:0004755;2.87e-10;3!UBERON:0002506;7.01e-09;1!UBERON:0001769;7.01e-09;1!UBERON:0000949;1.02e-08;43!UBERON:0010077;2.29e-08;4!UBERON:0005389;2.29e-08;4!UBERON:0000484;2.29e-08;4!UBERON:0000965;2.29e-08;4!UBERON:0001803;2.29e-08;4!UBERON:0007195;2.55e-08;1!UBERON:0010371;8.09e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.62e-29,4;UBERON:0007625,1.50e-23,11;UBERON:0002107,2.49e-23,19;UBERON:0006925,2.49e-23,19;UBERON:0008836,2.49e-23,19;UBERON:0001778,2.26e-22,3;UBERON:0001775,2.26e-22,3;UBERON:0007499,6.44e-22,25;UBERON:0009856,5.06e-21,26;UBERON:0008835,5.30e-20,22;UBERON:0003894,5.30e-20,22;UBERON:0002203,9.06e-20,6;UBERON:0001768,9.06e-20,6;UBERON:0002200,9.06e-20,6;UBERON:0009854,4.38e-19,23;UBERON:0001801,2.09e-18,14;UBERON:0009497,1.80e-17,25;UBERON:0000015,1.80e-17,25;UBERON:0002423,1.80e-17,25;UBERON:0006235,1.80e-17,25;UBERON:0004161,1.80e-17,25;UBERON:0006876,1.47e-16,11;UBERON:0006444,2.99e-15,2;UBERON:0001995,2.99e-15,2;UBERON:0004715,2.99e-15,2;UBERON:0002365,7.08e-14,31;UBERON:0002330,7.08e-14,31;UBERON:0000019,9.78e-13,20;UBERON:0000047,9.78e-13,20;UBERON:0010312,9.78e-13,20;UBERON:0004088,9.78e-13,20;UBERON:0010230,9.78e-13,20;UBERON:0003072,9.78e-13,20;UBERON:0004128,9.78e-13,20;UBERON:0003071,9.78e-13,20;UBERON:0002368,3.65e-12,35;UBERON:0000970,4.18e-12,21;UBERON:0002104,4.18e-12,21;UBERON:0003929,1.25e-11,54;UBERON:0001456,1.57e-11,22;UBERON:0000020,1.59e-10,24;UBERON:0001032,1.59e-10,24;UBERON:0004456,1.59e-10,24;UBERON:0002418,1.79e-10,3;UBERON:0004755,1.79e-10,3;UBERON:0005172,2.05e-09,54;UBERON:0005173,2.05e-09,54;UBERON:0000490,2.54e-09,148;UBERON:0000949,3.27e-09,45;UBERON:0002506,6.50e-09,1;UBERON:0001769,6.50e-09,1;UBERON:0005911,1.30e-08,82;UBERON:0002530,1.60e-08,59;UBERON:0003104,2.33e-08,160;UBERON:0009142,2.33e-08,160;UBERON:0002417,2.46e-08,60;UBERON:0000916,2.46e-08,60;UBERON:0010077,2.47e-08,4;UBERON:0005389,2.47e-08,4;UBERON:0000484,2.47e-08,4;UBERON:0002546,2.47e-08,4;UBERON:0000965,2.47e-08,4;UBERON:0001803,2.47e-08,4;UBERON:0003073,2.47e-08,4;UBERON:0005426,2.47e-08,4;UBERON:0007195,3.06e-08,1;UBERON:0005085,5.01e-08,31;UBERON:0001048,2.61e-07,160 | |||
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| ||
|short_description=p@chrX:106198311..106198340,- | |||
}} | }} |
Latest revision as of 04:50, 1 August 2015
Short description: | p@chrX:106198311..106198340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:106198311..106198340, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.11e-28 | 12 |
ciliated cell | 2.26e-22 | 3 |
ciliated epithelial cell | 2.26e-22 | 3 |
multi-ciliated epithelial cell | 2.26e-22 | 3 |
non-pigmented ciliary epithelial cell | 2.26e-22 | 3 |
annulus pulposus cell | 2.99e-15 | 2 |
columnar/cuboidal epithelial cell | 2.61e-09 | 27 |
meningothelial cell | 5.59e-09 | 1 |
pigment cell (sensu Vertebrata) | 6.50e-09 | 1 |
iris pigment epithelial cell | 6.50e-09 | 1 |
endodermal cell | 1.43e-08 | 58 |
crystallin accumulating cell | 2.47e-08 | 4 |
vertebrate lens cell | 2.47e-08 | 4 |
lens epithelial cell | 2.47e-08 | 4 |
mesenchymal stem cell of Wharton's jelly | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 5.59e-09 | 1 |
meningioma | 5.59e-09 | 1 |
pleomorphic carcinoma | 3.79e-08 | 1 |