FFCP PHASE1:Hg19::chr9:85678281..85678294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:85678281..85678294,+ | |||
|coexpression_cluster_id=C1052 | |coexpression_cluster_id=C1052 | ||
|description=CAGE_peak_at_chr9:85678281..85678294,+ | |description=CAGE_peak_at_chr9:85678281..85678294,+ | ||
|id=chr9:85678281..85678294,+ | |id=chr9:85678281..85678294,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.05e-09;3!CL:0000322;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.01e-09,3;CL:0000322,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.64e-26;1 | |||
|ontology_enrichment_disease=DOID:3493!3.21e-10!2;DOID:305!1.13e-09!106;DOID:4468!1.46e-09!2;DOID:0050687!7.86e-08!143 | |ontology_enrichment_disease=DOID:3493!3.21e-10!2;DOID:305!1.13e-09!106;DOID:4468!1.46e-09!2;DOID:0050687!7.86e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;8.82e-51;2!DOID:299;2.48e-16;25!DOID:3910;1.29e-13;2!DOID:4468;1.29e-13;2!DOID:4929;1.29e-13;2!DOID:3119;4.49e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.82e-51,2;DOID:299,2.48e-16,25;DOID:4468,1.07e-13,2;DOID:3910,1.21e-13,2;DOID:4929,1.55e-13,2;DOID:3119,4.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.14e-15!155;UBERON:0001555!1.14e-15!155;UBERON:0007026!1.14e-15!155;UBERON:0004119!4.35e-15!169;UBERON:0000925!4.35e-15!169;UBERON:0006595!4.35e-15!169;UBERON:0004921!9.83e-13!129;UBERON:0004185!9.83e-13!129;UBERON:0001004!1.45e-12!72;UBERON:0000077!1.94e-11!130;UBERON:0001041!6.35e-11!98;UBERON:0003408!2.65e-10!10;UBERON:0002294!9.36e-10!7;UBERON:0001173!9.36e-10!7;UBERON:0004912!9.36e-10!7;UBERON:0001829!1.23e-09!2;UBERON:0005911!2.51e-09!82;UBERON:0006562!5.15e-09!11;UBERON:0000065!1.10e-08!53;UBERON:0007023!2.16e-07!115;UBERON:0001044!5.73e-07!6;UBERON:0003293!5.73e-07!6;UBERON:0003294!5.73e-07!6;UBERON:0010047!5.73e-07!6;UBERON:0000167!5.73e-07!6;UBERON:0008814!9.17e-07!15 | |ontology_enrichment_uberon=UBERON:0001007!1.14e-15!155;UBERON:0001555!1.14e-15!155;UBERON:0007026!1.14e-15!155;UBERON:0004119!4.35e-15!169;UBERON:0000925!4.35e-15!169;UBERON:0006595!4.35e-15!169;UBERON:0004921!9.83e-13!129;UBERON:0004185!9.83e-13!129;UBERON:0001004!1.45e-12!72;UBERON:0000077!1.94e-11!130;UBERON:0001041!6.35e-11!98;UBERON:0003408!2.65e-10!10;UBERON:0002294!9.36e-10!7;UBERON:0001173!9.36e-10!7;UBERON:0004912!9.36e-10!7;UBERON:0001829!1.23e-09!2;UBERON:0005911!2.51e-09!82;UBERON:0006562!5.15e-09!11;UBERON:0000065!1.10e-08!53;UBERON:0007023!2.16e-07!115;UBERON:0001044!5.73e-07!6;UBERON:0003293!5.73e-07!6;UBERON:0003294!5.73e-07!6;UBERON:0010047!5.73e-07!6;UBERON:0000167!5.73e-07!6;UBERON:0008814!9.17e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.64e-26;1!UBERON:0003703;8.64e-26;1!UBERON:0001174;8.64e-26;1!UBERON:0004914;8.64e-26;1!UBERON:0002294;5.04e-15;7!UBERON:0001173;5.04e-15;7!UBERON:0004903;1.29e-13;2!UBERON:0002173;1.29e-13;2!UBERON:0002186;1.29e-13;2!UBERON:0000058;8.06e-11;10!UBERON:0002110;1.60e-09;3!UBERON:0004821;1.60e-09;3!UBERON:0007499;1.60e-09;3!UBERON:0003215;1.60e-09;3!UBERON:0010368;1.60e-09;3!UBERON:0009911;1.60e-09;3!UBERON:0002299;1.60e-09;3!UBERON:0002114;1.60e-09;2!UBERON:0006524;1.60e-09;3!UBERON:0008874;1.60e-09;3!UBERON:0002169;1.60e-09;3!UBERON:0004894;1.60e-09;3!UBERON:0002394;1.86e-07;4!UBERON:0003928;1.86e-07;4!UBERON:0009856;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.26e-25,1;UBERON:0003703,1.26e-25,1;UBERON:0001174,1.26e-25,1;UBERON:0004914,1.26e-25,1;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0002294,7.27e-12,9;UBERON:0001173,7.27e-12,9;UBERON:0004912,7.27e-12,9;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3;UBERON:0002110,1.67e-09,3;UBERON:0006242,1.67e-09,3;UBERON:0002114,1.81e-09,2 | |||
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| ||
|short_description=p@chr9:85678281..85678294,+ | |short_description=p@chr9:85678281..85678294,+ | ||
}} | }} |
Latest revision as of 02:57, 1 August 2015
Short description: | p@chr9:85678281..85678294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:85678281..85678294, + |
Coexpression cluster: | C1052_signet_colon_mucinous_papillotubular_adenocarcinoma_gall_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.01e-09 | 3 |
pneumocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.26e-25 | 1 |
extrahepatic bile duct | 1.26e-25 | 1 |
common bile duct | 1.26e-25 | 1 |
duodenal papilla | 1.26e-25 | 1 |
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
biliary system | 7.27e-12 | 9 |
biliary tree | 7.27e-12 | 9 |
biliary bud | 7.27e-12 | 9 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
gallbladder | 1.67e-09 | 3 |
gall bladder primordium | 1.67e-09 | 3 |
duodenum | 1.81e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.82e-51 | 2 |
adenocarcinoma | 2.48e-16 | 25 |
clear cell adenocarcinoma | 1.07e-13 | 2 |
lung adenocarcinoma | 1.21e-13 | 2 |
tubular adenocarcinoma | 1.55e-13 | 2 |
gastrointestinal system cancer | 4.66e-08 | 14 |