FFCP PHASE1:Hg19::chr9:73094859..73094866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:73094859..73094866,- | |||
|coexpression_cluster_id=C679 | |coexpression_cluster_id=C679 | ||
|description=CAGE_peak_at_chr9:73094859..73094866,- | |description=CAGE_peak_at_chr9:73094859..73094866,- | ||
|id=chr9:73094859..73094866,- | |id=chr9:73094859..73094866,- | ||
|ontology_enrichment_celltype=CL:0000680!1.59e-10!57;CL:0000056!1.59e-10!57;CL:0000355!1.59e-10!57;CL:0000055!1.67e-08!180;CL:0000136!3.03e-08!15;CL:0000187!5.98e-08!54;CL:0000183!9.31e-08!59;CL:0000393!1.82e-07!60;CL:0000211!1.82e-07!60;CL:0000144!6.38e-07!625;CL:0002564!8.59e-07!3;CL:0002371!9.70e-07!591 | |ontology_enrichment_celltype=CL:0000680!1.59e-10!57;CL:0000056!1.59e-10!57;CL:0000355!1.59e-10!57;CL:0000055!1.67e-08!180;CL:0000136!3.03e-08!15;CL:0000187!5.98e-08!54;CL:0000183!9.31e-08!59;CL:0000393!1.82e-07!60;CL:0000211!1.82e-07!60;CL:0000144!6.38e-07!625;CL:0002564!8.59e-07!3;CL:0002371!9.70e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.80e-17;2!CL:0002571;2.80e-17;2!CL:0002561;4.53e-17;2!CL:0002602;6.22e-17;2!CL:0002600;1.32e-16;2!CL:0002536;4.75e-16;2!CL:0002559;9.35e-15;5!CL:0002564;3.16e-11;3!CL:0000515;5.15e-11;3!CL:0002581;3.30e-09;1!CL:0002599;6.98e-09;1!CL:0000056;1.76e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.81e-17,2;CL:0002571,2.81e-17,2;CL:0002561,4.54e-17,2;CL:0002602,6.23e-17,2;CL:0002600,1.37e-16,2;CL:0002536,6.47e-16,2;CL:0002559,8.73e-15,5;CL:0002564,3.60e-11,3;CL:0002581,2.82e-09,1;CL:0002599,5.75e-09,1;CL:0000515,1.21e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.30e-09;1!CL:0000515;1.76e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.02e-12!83;UBERON:0002329!3.02e-12!83;UBERON:0003077!3.02e-12!83;UBERON:0003059!3.02e-12!83;UBERON:0007282!3.02e-12!83;UBERON:0009618!3.02e-12!83;UBERON:0007285!3.02e-12!83;UBERON:0004290!2.74e-11!70;UBERON:0001134!2.27e-10!61;UBERON:0002036!2.27e-10!61;UBERON:0003082!2.27e-10!61;UBERON:0002385!7.71e-10!63;UBERON:0001015!7.71e-10!63;UBERON:0000383!7.71e-10!63;UBERON:0000486!2.06e-09!82;UBERON:0002242!8.59e-07!3;UBERON:0003068!8.59e-07!3;UBERON:0002328!8.59e-07!3;UBERON:0004880!8.59e-07!3 | |ontology_enrichment_uberon=UBERON:0000914!3.02e-12!83;UBERON:0002329!3.02e-12!83;UBERON:0003077!3.02e-12!83;UBERON:0003059!3.02e-12!83;UBERON:0007282!3.02e-12!83;UBERON:0009618!3.02e-12!83;UBERON:0007285!3.02e-12!83;UBERON:0004290!2.74e-11!70;UBERON:0001134!2.27e-10!61;UBERON:0002036!2.27e-10!61;UBERON:0003082!2.27e-10!61;UBERON:0002385!7.71e-10!63;UBERON:0001015!7.71e-10!63;UBERON:0000383!7.71e-10!63;UBERON:0000486!2.06e-09!82;UBERON:0002242!8.59e-07!3;UBERON:0003068!8.59e-07!3;UBERON:0002328!8.59e-07!3;UBERON:0004880!8.59e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.98e-25;5!UBERON:0002216;2.98e-25;5!UBERON:0011134;2.98e-25;5!UBERON:0002209;2.98e-25;5!UBERON:0002213;2.98e-25;5!UBERON:0007844;2.98e-25;5!UBERON:0011138;2.98e-25;5!UBERON:0001130;2.98e-25;5!UBERON:0001066;2.98e-25;5!UBERON:0001468;2.98e-25;5!UBERON:0005933;4.53e-17;2!UBERON:0005942;4.53e-17;2!UBERON:0005932;4.53e-17;2!UBERON:0006444;6.22e-17;2!UBERON:0001995;6.22e-17;2!UBERON:0004715;6.22e-17;2!UBERON:0004905;7.04e-16;8!UBERON:0000982;7.04e-16;8!UBERON:0004770;7.04e-16;8!UBERON:0002073;9.35e-15;5!UBERON:0002418;1.34e-11;3!UBERON:0004755;1.34e-11;3!UBERON:0002242;3.16e-11;3!UBERON:0000075;5.14e-08;16!UBERON:0004765;2.29e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.49e-25,5;UBERON:0002216,3.49e-25,5;UBERON:0011134,3.49e-25,5;UBERON:0002209,3.49e-25,5;UBERON:0002213,3.49e-25,5;UBERON:0005856,3.49e-25,5;UBERON:0005866,3.49e-25,5;UBERON:0005863,3.49e-25,5;UBERON:0007844,3.49e-25,5;UBERON:0011138,3.49e-25,5;UBERON:0001130,3.49e-25,5;UBERON:0001066,3.49e-25,5;UBERON:0001468,3.49e-25,5;UBERON:0005933,4.54e-17,2;UBERON:0005942,4.54e-17,2;UBERON:0005932,4.54e-17,2;UBERON:0006444,6.23e-17,2;UBERON:0001995,6.23e-17,2;UBERON:0004715,6.23e-17,2;UBERON:0004905,7.77e-16,8;UBERON:0000982,7.77e-16,8;UBERON:0004770,7.77e-16,8;UBERON:0002073,8.73e-15,5;UBERON:0005086,8.73e-15,5;UBERON:0002418,1.34e-11,3;UBERON:0004755,1.34e-11,3;UBERON:0002242,3.60e-11,3;UBERON:0003068,3.60e-11,3;UBERON:0002328,3.60e-11,3;UBERON:0004880,3.60e-11,3;UBERON:0000075,5.39e-08,16 | |||
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| ||
|short_description=p@chr9:73094859..73094866,- | |short_description=p@chr9:73094859..73094866,- | ||
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Latest revision as of 02:31, 1 August 2015
Short description: | p@chr9:73094859..73094866, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:73094859..73094866, - |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.81e-17 | 2 |
hepatic mesenchymal stem cell | 2.81e-17 | 2 |
outer root sheath cell | 4.54e-17 | 2 |
annulus pulposus cell | 6.23e-17 | 2 |
smooth muscle cell of trachea | 1.37e-16 | 2 |
amniotic epithelial cell | 6.47e-16 | 2 |
hair follicle cell | 8.73e-15 | 5 |
nucleus pulposus cell of intervertebral disc | 3.60e-11 | 3 |
perirenal preadipocyte | 2.82e-09 | 1 |
smooth muscle cell of the esophagus | 5.75e-09 | 1 |
skeletal muscle myoblast | 1.21e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.49e-25 | 5 |
symphysis | 3.49e-25 | 5 |
nonsynovial joint | 3.49e-25 | 5 |
fibrous joint | 3.49e-25 | 5 |
cartilaginous joint | 3.49e-25 | 5 |
developing mesenchymal condensation | 3.49e-25 | 5 |
pre-cartilage condensation | 3.49e-25 | 5 |
cartilaginous condensation | 3.49e-25 | 5 |
cartilage element | 3.49e-25 | 5 |
post-cranial axial skeletal system | 3.49e-25 | 5 |
vertebral column | 3.49e-25 | 5 |
intervertebral disk | 3.49e-25 | 5 |
intervertebral joint | 3.49e-25 | 5 |
hair root sheath | 4.54e-17 | 2 |
hair outer root sheath | 4.54e-17 | 2 |
bulb of hair follicle | 4.54e-17 | 2 |
annulus fibrosus | 6.23e-17 | 2 |
fibrocartilage | 6.23e-17 | 2 |
annulus fibrosus disci intervertebralis | 6.23e-17 | 2 |
articulation | 7.77e-16 | 8 |
skeletal joint | 7.77e-16 | 8 |
articular system | 7.77e-16 | 8 |
hair follicle | 8.73e-15 | 5 |
hair follicle placode | 8.73e-15 | 5 |
cartilage tissue | 1.34e-11 | 3 |
skeletal tissue | 1.34e-11 | 3 |
nucleus pulposus | 3.60e-11 | 3 |
axial mesoderm | 3.60e-11 | 3 |
notochord | 3.60e-11 | 3 |
chordamesoderm | 3.60e-11 | 3 |
subdivision of skeletal system | 5.39e-08 | 16 |