FFCP PHASE1:Hg19::chr9:34709547..34709591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:34709547..34709591,+ | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_at_chr9:34709547..34709591,+ | |description=CAGE_peak_at_chr9:34709547..34709591,+ | ||
|id=chr9:34709547..34709591,+ | |id=chr9:34709547..34709591,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.11e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.90e-11;7!UBERON:0006595;1.27e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-34!115;UBERON:0004921!3.78e-10!129;UBERON:0004185!3.78e-10!129;UBERON:0001007!9.93e-10!155;UBERON:0001555!9.93e-10!155;UBERON:0007026!9.93e-10!155;UBERON:0004119!4.85e-09!169;UBERON:0000925!4.85e-09!169;UBERON:0006595!4.85e-09!169;UBERON:0005409!1.18e-08!35;UBERON:0001829!3.25e-07!2;UBERON:0003103!6.84e-07!69;UBERON:0003127!9.36e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.46e-34!115;UBERON:0004921!3.78e-10!129;UBERON:0004185!3.78e-10!129;UBERON:0001007!9.93e-10!155;UBERON:0001555!9.93e-10!155;UBERON:0007026!9.93e-10!155;UBERON:0004119!4.85e-09!169;UBERON:0000925!4.85e-09!169;UBERON:0006595!4.85e-09!169;UBERON:0005409!1.18e-08!35;UBERON:0001829!3.25e-07!2;UBERON:0003103!6.84e-07!69;UBERON:0003127!9.36e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.46e-19;33!UBERON:0000160;9.12e-16;17!UBERON:0005409;4.08e-15;22!UBERON:0001829;3.29e-11;2!UBERON:0000059;9.29e-11;11!UBERON:0000922;1.38e-10;49!UBERON:0003127;2.18e-10;2!UBERON:0000341;3.84e-10;2!UBERON:0001555;1.02e-09;54!UBERON:0002108;4.26e-09;4!UBERON:0001155;7.75e-09;9!UBERON:0001007;1.12e-07;81!UBERON:0003124;1.13e-07;3!UBERON:0000920;1.13e-07;3!UBERON:0001723;3.18e-07;3!UBERON:0001033;3.18e-07;3!UBERON:0002106;4.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.14e-22,114;UBERON:0005409,1.09e-19,25;UBERON:0000160,8.68e-16,17;UBERON:0001007,1.51e-14,145;UBERON:0001555,1.51e-14,145;UBERON:0007026,1.51e-14,145;UBERON:0004921,3.99e-14,118;UBERON:0004119,6.71e-14,160;UBERON:0000925,6.71e-14,160;UBERON:0006595,6.71e-14,160;UBERON:0001829,3.30e-11,2;UBERON:0000059,9.79e-11,11;UBERON:0003127,1.98e-10,2;UBERON:0000341,3.66e-10,2;UBERON:0002108,3.71e-09,4;UBERON:0001155,7.83e-09,9;UBERON:0000920,1.11e-07,3;UBERON:0001723,2.80e-07,3;UBERON:0001033,2.80e-07,3;UBERON:0010056,2.80e-07,3;UBERON:0002106,5.22e-07,3;UBERON:0004854,5.22e-07,3;UBERON:0009034,5.22e-07,3;UBERON:0002095,5.22e-07,3;UBERON:0004782,5.22e-07,3;UBERON:0003281,5.22e-07,3;UBERON:0009664,5.22e-07,3;UBERON:0002296,5.22e-07,3;UBERON:0005602,5.22e-07,3;UBERON:0001179,5.22e-07,3;UBERON:0006293,5.22e-07,3 | |||
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| ||
|short_description=p@chr9:34709547..34709591,+ | |short_description=p@chr9:34709547..34709591,+ | ||
}} | }} |
Latest revision as of 01:37, 1 August 2015
Short description: | p@chr9:34709547..34709591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:34709547..34709591, + |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.14e-22 | 114 |
gastrointestinal system | 1.09e-19 | 25 |
intestine | 8.68e-16 | 17 |
digestive system | 1.51e-14 | 145 |
digestive tract | 1.51e-14 | 145 |
primitive gut | 1.51e-14 | 145 |
subdivision of digestive tract | 3.99e-14 | 118 |
endoderm-derived structure | 6.71e-14 | 160 |
endoderm | 6.71e-14 | 160 |
presumptive endoderm | 6.71e-14 | 160 |
major salivary gland | 3.30e-11 | 2 |
large intestine | 9.79e-11 | 11 |
open tracheal system trachea | 1.98e-10 | 2 |
throat | 3.66e-10 | 2 |
small intestine | 3.71e-09 | 4 |
colon | 7.83e-09 | 9 |
egg chorion | 1.11e-07 | 3 |
tongue | 2.80e-07 | 3 |
gustatory system | 2.80e-07 | 3 |
future tongue | 2.80e-07 | 3 |
spleen | 5.22e-07 | 3 |
gastrointestinal system mesentery | 5.22e-07 | 3 |
stomach region | 5.22e-07 | 3 |
mesentery | 5.22e-07 | 3 |
gastrointestinal system serosa | 5.22e-07 | 3 |
mesentery of stomach | 5.22e-07 | 3 |
gut mesentery | 5.22e-07 | 3 |
dorsal mesentery | 5.22e-07 | 3 |
dorsal mesogastrium | 5.22e-07 | 3 |
peritoneal cavity | 5.22e-07 | 3 |
spleen primordium | 5.22e-07 | 3 |