FFCP PHASE1:Hg19::chr9:137593007..137593032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137593007..137593032,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137593007..137593032,+ | |description=CAGE_peak_at_chr9:137593007..137593032,+ | ||
|id=chr9:137593007..137593032,+ | |id=chr9:137593007..137593032,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.79e-29!180;CL:0000057!2.67e-19!75;CL:0000183!7.02e-11!59;CL:0000680!7.55e-11!57;CL:0000056!7.55e-11!57;CL:0000355!7.55e-11!57;CL:0000187!3.28e-10!54;CL:0002334!2.98e-08!12;CL:0000048!3.25e-08!430;CL:0000393!7.76e-08!60;CL:0000211!7.76e-08!60;CL:0000192!8.37e-08!42;CL:0000514!8.37e-08!42;CL:0002494!1.07e-07!16;CL:0000723!1.18e-07!436;CL:0000144!1.29e-07!625;CL:0002371!1.41e-07!591;CL:0000034!2.35e-07!444;CL:0000222!2.63e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.79e-29!180;CL:0000057!2.67e-19!75;CL:0000183!7.02e-11!59;CL:0000680!7.55e-11!57;CL:0000056!7.55e-11!57;CL:0000355!7.55e-11!57;CL:0000187!3.28e-10!54;CL:0002334!2.98e-08!12;CL:0000048!3.25e-08!430;CL:0000393!7.76e-08!60;CL:0000211!7.76e-08!60;CL:0000192!8.37e-08!42;CL:0000514!8.37e-08!42;CL:0002494!1.07e-07!16;CL:0000723!1.18e-07!436;CL:0000144!1.29e-07!625;CL:0002371!1.41e-07!591;CL:0000034!2.35e-07!444;CL:0000222!2.63e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.51e-15;19!CL:0000134;2.34e-12;55!CL:0000048;7.09e-11;58!CL:0000723;3.20e-10;61!CL:0002334;4.34e-10;12!CL:0000057;2.01e-08;73!CL:0002569;2.06e-08;6!CL:0002320;1.12e-07;188!CL:0000034;1.47e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.56e-22,76;CL:0000349,2.84e-15,19;CL:0000048,2.98e-13,427;CL:0000723,1.18e-12,433;CL:0002320,2.07e-12,361;CL:0000134,4.38e-12,354;CL:0000034,6.92e-12,441;CL:0002334,5.47e-10,12;CL:0000219,2.63e-09,386;CL:0002569,2.44e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.02e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.39e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.59e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.47e-11!83;UBERON:0002329!1.47e-11!83;UBERON:0003077!1.47e-11!83;UBERON:0003059!1.47e-11!83;UBERON:0007282!1.47e-11!83;UBERON:0009618!1.47e-11!83;UBERON:0007285!1.47e-11!83;UBERON:0002385!3.90e-11!63;UBERON:0001015!3.90e-11!63;UBERON:0000383!3.90e-11!63;UBERON:0001134!5.18e-11!61;UBERON:0002036!5.18e-11!61;UBERON:0003082!5.18e-11!61;UBERON:0004290!7.53e-11!70;UBERON:0000486!4.69e-09!82;UBERON:0004872!1.29e-08!84;UBERON:0000478!2.90e-08!24;UBERON:0005256!7.47e-08!143 | |ontology_enrichment_uberon=UBERON:0000914!1.47e-11!83;UBERON:0002329!1.47e-11!83;UBERON:0003077!1.47e-11!83;UBERON:0003059!1.47e-11!83;UBERON:0007282!1.47e-11!83;UBERON:0009618!1.47e-11!83;UBERON:0007285!1.47e-11!83;UBERON:0002385!3.90e-11!63;UBERON:0001015!3.90e-11!63;UBERON:0000383!3.90e-11!63;UBERON:0001134!5.18e-11!61;UBERON:0002036!5.18e-11!61;UBERON:0003082!5.18e-11!61;UBERON:0004290!7.53e-11!70;UBERON:0000486!4.69e-09!82;UBERON:0004872!1.29e-08!84;UBERON:0000478!2.90e-08!24;UBERON:0005256!7.47e-08!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.26e-12;24!UBERON:0003104;8.73e-10;7!UBERON:0009142;8.73e-10;7!UBERON:0004457;4.32e-09;9!UBERON:0000042;4.32e-09;9!UBERON:0003688;5.99e-09;6!UBERON:0002358;5.99e-09;6!UBERON:0003684;5.99e-09;6!UBERON:0001178;5.99e-09;6!UBERON:0003422;2.06e-08;6!UBERON:0002384;2.37e-08;198!UBERON:0005631;2.50e-07;10!UBERON:0000158;2.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.20e-13,371;UBERON:0000478,5.72e-13,24;UBERON:0003688,7.24e-09,6;UBERON:0002358,7.24e-09,6;UBERON:0003684,7.24e-09,6;UBERON:0001178,7.24e-09,6;UBERON:0003422,2.44e-08,6;UBERON:0005631,4.17e-08,14;UBERON:0000158,4.17e-08,14;UBERON:0004923,1.39e-07,66 | |||
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| ||
|short_description=p@chr9:137593007..137593032,+ | |short_description=p@chr9:137593007..137593032,+ | ||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137593007..137593032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137593007..137593032, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.56e-22 | 76 |
extraembryonic cell | 2.84e-15 | 19 |
multi fate stem cell | 2.98e-13 | 427 |
somatic stem cell | 1.18e-12 | 433 |
connective tissue cell | 2.07e-12 | 361 |
mesenchymal cell | 4.38e-12 | 354 |
stem cell | 6.92e-12 | 441 |
preadipocyte | 5.47e-10 | 12 |
motile cell | 2.63e-09 | 386 |
mesenchymal stem cell of umbilical cord | 2.44e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.20e-13 | 371 |
extraembryonic structure | 5.72e-13 | 24 |
omentum | 7.24e-09 | 6 |
peritoneum | 7.24e-09 | 6 |
abdominal cavity | 7.24e-09 | 6 |
visceral peritoneum | 7.24e-09 | 6 |
mesenchyme of umbilical cord | 2.44e-08 | 6 |
extraembryonic membrane | 4.17e-08 | 14 |
membranous layer | 4.17e-08 | 14 |
organ component layer | 1.39e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.59e-07 | 14 |