FFCP PHASE1:Hg19::chr9:132094662..132094715,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:132094662..132094715,+
|short_description=p1@ENST00000427109
|description=CAGE_peak_1_at_ENST00000427109_5end
|association_with_transcript=83bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=83bp_to_ENST00000427109_5end | |||
|cluster_id=chr9:132094662..132094715,+ | |||
|coexpression_cluster_id=C2560 | |||
|description=CAGE_peak_1_at_ENST00000427109_5end | |||
|id=chr9:132094662..132094715,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.80e-14!43;CL:0000223!3.46e-10!59;CL:0002251!2.31e-09!21;CL:0002159!2.52e-09!13;CL:0002368!6.13e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.76e-16;42!CL:0002159;7.62e-16;14!CL:0002368;8.55e-13;13!CL:0002251;3.99e-12;20!CL:0000362;1.96e-09;9!CL:0002077;4.54e-08;34!CL:0002202;1.15e-07;9!CL:0002632;1.15e-07;9!CL:0000622;1.49e-07;5!CL:0000244;2.71e-07;4!CL:0000731;2.71e-07;4!CL:0002559;7.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.97e-21,42;CL:0002159,6.70e-16,14;CL:0000223,2.92e-14,58;CL:0002368,7.07e-13,13;CL:0002251,3.65e-12,20;CL:0000362,1.73e-09,9;CL:0002077,2.87e-09,34;CL:0000066,8.96e-09,253;CL:0002202,9.57e-08,9;CL:0002632,9.57e-08,9;CL:0000622,1.50e-07,5;CL:0000244,2.73e-07,4;CL:0000731,2.73e-07,4;CL:0002559,6.08e-07,5;CL:0000076,9.24e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;4.40e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!4.67e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.41e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.50e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!9.18e-16!95;UBERON:0000161!1.23e-10!35;UBERON:0000475!7.76e-10!365;UBERON:0000165!2.02e-09!28;UBERON:0000930!2.02e-09!28;UBERON:0000166!7.62e-09!21;UBERON:0001444!6.75e-08!48;UBERON:0002097!1.28e-07!40;UBERON:0001004!2.13e-07!72;UBERON:0004119!9.38e-07!169;UBERON:0000925!9.38e-07!169;UBERON:0006595!9.38e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;9.87e-12;28!UBERON:0000161;1.12e-11;19!UBERON:0000166;1.12e-11;19!UBERON:0001003;2.71e-11;15!UBERON:0007376;2.71e-11;15!UBERON:0003729;7.46e-10;13!UBERON:0000486;2.54e-09;12!UBERON:0000365;1.36e-08;5!UBERON:0000344;4.01e-08;20!UBERON:0010371;1.92e-07;31!UBERON:0003343;2.93e-07;4!UBERON:0004785;2.93e-07;4!UBERON:0005910;5.09e-07;6!UBERON:0002073;7.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.66e-21,99;UBERON:0000161,1.94e-13,36;UBERON:0000166,1.32e-12,22;UBERON:0001004,1.32e-12,74;UBERON:0001003,2.26e-11,15;UBERON:0007376,2.26e-11,15;UBERON:0007383,2.26e-11,15;UBERON:0000165,3.61e-11,29;UBERON:0000930,3.61e-11,29;UBERON:0003729,8.31e-10,13;UBERON:0000153,1.02e-09,62;UBERON:0007811,1.02e-09,62;UBERON:0004119,8.02e-09,160;UBERON:0000925,8.02e-09,160;UBERON:0006595,8.02e-09,160;UBERON:0000033,8.08e-09,56;UBERON:0000365,1.36e-08,5;UBERON:0000344,4.15e-08,20;UBERON:0002097,7.09e-08,41;UBERON:0001444,7.36e-08,49;UBERON:0003343,2.99e-07,4;UBERON:0004785,2.99e-07,4;UBERON:0002199,3.46e-07,46;UBERON:0002416,3.46e-07,46;UBERON:0005910,5.11e-07,6;UBERON:0000065,5.13e-07,54;UBERON:0002073,6.08e-07,5;UBERON:0005086,6.08e-07,5;UBERON:0004923,8.62e-07,66 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.40954404095971,0,1.78784437770915,0.872338524100369,0,0,1.04474251279935,0,0,0.436882744260345,0.791300934685361,0.247532705920093,1.65698687863958,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,48.7293248973831,48.19294700452,91.6989945213633,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,2.00535164254356,1.01392563272577,0,2.43317435151318,0.283604451492204,0,0.43917392846563,0.261958150995425,127.867646190682,70.0782596862572,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,98.1211617320702,0,0.12663051166458,0,0,0.354668382198357,1.68203280042692,0,0.24666754841716,0.311211035399766,0,0,1.21085942115945,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0,0,0.125118519871964,0,0.877955241761676,0.612975591598039,1.95309476578576,0,0.358779271377724,2.98980344345994,1.69545520927649,0.900273288253207,1.03052529238439,1.28820270022815,1.8611685633159,0.168776332241266,0.292311015483596,0.504867548488229,2.48534726334208,2.58633690910099,0.355009592516614,0.906768884048762,0.508681776931463,38.4589097794961,29.4565810238101,31.2617008974014,0,0,0,0.207322110030741,0,0,4.69348596989448,9.00537313470039,2.76269842704961,4.64367928031979,7.94067429836544,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0.857839051492628,41.1563570282346,121.393893518229,33.777734730308,79.0705321653843,0,0,0,0.231860809950154,1.17408694235822,0.144366447761074,0,0,0,0,0,0,0,33.7441802352397,36.2841396909537,34.8766739216271,32.5993022638368,39.8168495764128,54.0569577622948,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0.448524337381443,0,0.2933531432838,0.646358578788889,3.57656445851882,0,0,1.04007436911366,0.514414748524284,0,0.799266537048298,0.285955987316295,1.08524321078289,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,4.59447743336456,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,3.00102312635806,1.08506009479894,1.03985430765404,0.535286966391485,1.10391690523754,0.234282829985426,9.32932909155929,15.9185252839189,2.0694614258501,0,0.368738337083406,0.173767228936166,4.69922777910577,0.686286847621712,0,0,0,0,0,0.907170879989041,1.98486246255021,0.306923946576125,1.12264037773229,2.69092213436972,0.511707249066704,0.965123526861645,0,0,0,0.0821271560138091,0,0,0,55.1392793334033,122.099391328999,0.114814448164607,0,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,2.36994326789761,0,0.247528499761764,28.1390113618124,34.4531930399356,0,0,0.154048617114644,0.15350367472613,0,0.751941714077915,0.290033387828457,0.170453254832202,0.0890320356467374,108.426904476802,62.8461520283897,47.3443163354907,73.3393911202737,1.39453664789186,0,0,0,0,0,0,0,1.116475108079,1.2655176988749,0.953150969619124,0,0,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0.491245205065606,0,0,0.422215270595328,4.28083360847872,0,0,70.2421422896238,53.624182042863,56.6233121278877,2.35359501941948,83.5180422982186,107.82174442728,119.726141454902,66.3900626598113,0,0,0,0,0,0,0,0,0.320472213382419,0,24.0139411661411,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,5.04839957415486,0.921482106297696,0,0,0,0.16480387422676,0,1.79323189425963,0,0,0.20453736500431,0,0.311039587661807,0,0,0,4.43895325366201,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,19.5724731051059,1.77977555204936,4.49136595359079,0.344743373241465,0,0,1.77148277162768,1.4471572635049,0,0,0,0.438770794307945,0,135.519879438802,2.46240827212151,0,0,0.0897576444097721,0,2.23300811812344,2.56473261525214,18.6562171606522,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.876214728748802,0,0.234264445725339,0,122.094722213624,0.242780379534093,3.94584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,1.38674673013139,0.347119476670262,68.6926705874787,62.943806357631,2.97035336011451,0,0,0,0,8.43804443449249,0,1.35588444468319,0,0,0,0,0,0.213452994739353,1.59847687665704,0,0,0,0,0,108.654949958343,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0.223171457441873,0,0,0,0.236349546921671,0.412079291905832,0.404421263125109,0,0,0,0,0,0,0,0,0.77380195455795,0,86.2067147130114,0.315222829196793,0.314727528809989,0,0,130.502334177223,0,0,1.27134268827375,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0,0,1.29282956361551,0.66116300871345,0,0.704815022316672,0.320362237703084,1.10043013569766,0,0,0,0,74.6859271591113,0,0,0,0,0.157054096250234,0,0,0,3.44045517414043,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| ||
|short_description=p1@ENST00000427109 | |||
}} | }} |
Latest revision as of 23:24, 31 July 2015
Short description: | p1@ENST00000427109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000427109_5end |
Coexpression cluster: | C2560_nasal_squamous_Small_cervical_Prostate_Tracheal_Urothelial |
Association with transcript: | 83bp_to_ENST00000427109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.97e-21 | 42 |
general ecto-epithelial cell | 6.70e-16 | 14 |
endodermal cell | 2.92e-14 | 58 |
respiratory epithelial cell | 7.07e-13 | 13 |
epithelial cell of alimentary canal | 3.65e-12 | 20 |
epidermal cell | 1.73e-09 | 9 |
ecto-epithelial cell | 2.87e-09 | 34 |
epithelial cell | 8.96e-09 | 253 |
epithelial cell of tracheobronchial tree | 9.57e-08 | 9 |
epithelial cell of lower respiratory tract | 9.57e-08 | 9 |
acinar cell | 1.50e-07 | 5 |
transitional epithelial cell | 2.73e-07 | 4 |
urothelial cell | 2.73e-07 | 4 |
hair follicle cell | 6.08e-07 | 5 |
squamous epithelial cell | 9.24e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.66e-21 | 99 |
orifice | 1.94e-13 | 36 |
oral opening | 1.32e-12 | 22 |
respiratory system | 1.32e-12 | 74 |
skin epidermis | 2.26e-11 | 15 |
outer epithelium | 2.26e-11 | 15 |
enveloping layer of ectoderm | 2.26e-11 | 15 |
mouth | 3.61e-11 | 29 |
stomodeum | 3.61e-11 | 29 |
mouth mucosa | 8.31e-10 | 13 |
anterior region of body | 1.02e-09 | 62 |
craniocervical region | 1.02e-09 | 62 |
endoderm-derived structure | 8.02e-09 | 160 |
endoderm | 8.02e-09 | 160 |
presumptive endoderm | 8.02e-09 | 160 |
head | 8.08e-09 | 56 |
urothelium | 1.36e-08 | 5 |
mucosa | 4.15e-08 | 20 |
skin of body | 7.09e-08 | 41 |
subdivision of head | 7.36e-08 | 49 |
mucosa of oral region | 2.99e-07 | 4 |
respiratory system mucosa | 2.99e-07 | 4 |
integument | 3.46e-07 | 46 |
integumental system | 3.46e-07 | 46 |
transitional epithelium | 5.11e-07 | 6 |
respiratory tract | 5.13e-07 | 54 |
hair follicle | 6.08e-07 | 5 |
hair follicle placode | 6.08e-07 | 5 |
organ component layer | 8.62e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.50e-15 | 14 |