FFCP PHASE1:Hg19::chr9:131397542..131397587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:131397542..131397587,- | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr9:131397542..131397587,- | |description=CAGE_peak_at_chr9:131397542..131397587,- | ||
|id=chr9:131397542..131397587,- | |id=chr9:131397542..131397587,- | ||
|ontology_enrichment_celltype=CL:0000066!1.23e-15!254;CL:0002076!6.93e-09!43;CL:0000223!2.87e-08!59;CL:0002368!5.50e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.23e-15!254;CL:0002076!6.93e-09!43;CL:0000223!2.87e-08!59;CL:0002368!5.50e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.51e-08;9!CL:0002632;1.51e-08;9!CL:0000082;7.22e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.41e-10,253;CL:0002202,1.49e-08,9;CL:0002632,1.49e-08,9;CL:0000082,6.36e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.56e-09;1!UBERON:0000358;2.16e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.37e-30!106;DOID:0050687!1.94e-25!143;DOID:162!2.68e-15!235;DOID:14566!1.39e-14!239;DOID:299!6.16e-14!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.40e-19;4!DOID:1612;7.40e-19;4!DOID:299;5.85e-15;25!DOID:1325;7.57e-11;7!DOID:3904;7.57e-11;7!DOID:3111;3.98e-09;1!DOID:3603;3.98e-09;1!DOID:305;1.27e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.41e-19,4;DOID:1612,7.41e-19,4;DOID:305,1.72e-16,106;DOID:299,6.18e-15,25;DOID:0050687,1.79e-11,143;DOID:1325,6.73e-11,7;DOID:3904,6.73e-11,7;DOID:3111,3.83e-09,1;DOID:3603,3.83e-09,1;DOID:162,9.61e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000065!8.33e-23!53;UBERON:0008947!1.17e-22!38;UBERON:0003258!1.17e-22!38;UBERON:0004119!1.14e-21!169;UBERON:0000925!1.14e-21!169;UBERON:0006595!1.14e-21!169;UBERON:0001004!2.22e-20!72;UBERON:0000077!7.02e-20!130;UBERON:0001007!3.06e-19!155;UBERON:0001555!3.06e-19!155;UBERON:0007026!3.06e-19!155;UBERON:0004921!5.37e-18!129;UBERON:0004185!5.37e-18!129;UBERON:0001041!2.09e-17!98;UBERON:0000072!4.14e-17!46;UBERON:0001737!1.86e-14!9;UBERON:0005178!1.02e-13!34;UBERON:0002224!1.02e-13!34;UBERON:0005181!3.68e-13!35;UBERON:0000464!1.07e-11!104;UBERON:0000915!1.80e-10!52;UBERON:0000466!5.48e-10!126;UBERON:0001557!1.25e-08!19;UBERON:0005177!1.80e-08!107;UBERON:0002048!2.73e-08!22;UBERON:0000117!2.73e-08!22;UBERON:0000171!2.73e-08!22;UBERON:0000170!2.73e-08!22;UBERON:0005597!2.73e-08!22;UBERON:0000118!2.73e-08!22;UBERON:0003104!2.77e-08!238;UBERON:0009142!2.77e-08!238;UBERON:0005153!3.63e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;8.82e-12;3!UBERON:0002294;3.77e-11;7!UBERON:0001173;3.77e-11;7!UBERON:0000310;7.42e-08;10!UBERON:0002075;1.80e-07;18!UBERON:0001443;3.50e-07;11!UBERON:0004802;7.22e-07;19!UBERON:0000115;7.22e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,7.51e-12,3;UBERON:0006242,7.51e-12,3;UBERON:0002294,8.15e-09,9;UBERON:0001173,8.15e-09,9;UBERON:0004912,8.15e-09,9;UBERON:0000915,9.04e-09,52;UBERON:0000310,7.42e-08,10;UBERON:0002075,1.74e-07,18;UBERON:0000072,1.81e-07,47;UBERON:0001443,3.50e-07,11;UBERON:0008947,5.17e-07,38;UBERON:0003258,5.17e-07,38;UBERON:0004802,6.36e-07,19;UBERON:0000115,6.36e-07,19;UBERON:0009569,7.73e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,1.83884244895785,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.709840800239063,0.674338760312407,0.964044119533928,0.992645754591546,0.653638332277218,0.474541238222193,0.134831308160164,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,3.1608175918371,6.00940313466411,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,20.4084139130194,0,0,0,0,0,0,0,1.30213880542617,0,0,0.682760689712998,6.10208760702639,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.46112780877612,0.0897576444097721,0.217294743844016,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0.123563938946503,0,0,0,0,0,4.10895699757388,0.242780379534093,0,0,0,0,0,0,0.664653872707185,0,0,0,0.569219092059585,0,2.42983633669183,0.489961987071888,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,2.93327074102205,0,3.84215390530835,0,0,0,0,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.506827321959218,0,1.38172136692479,0,0,0,0,0,0,0.245772908753719,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,2.07946199070609,0,0,0,0,0,4.68908406739856,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.177404740325278,0,0,0,0,0.590969204419841,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0.559277158988962,0.785201868921944,4.63288114932624,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,1.81155412280008,2.9326180081019,0,3.76253837089218,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0.162806537221949,0.320182037633146,0,0.0898252021065869,2.34640942403454,0,0,0,0,0 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| ||
|short_description=p@chr9:131397542..131397587,- | |short_description=p@chr9:131397542..131397587,- | ||
}} | }} |
Latest revision as of 23:15, 31 July 2015
Short description: | p@chr9:131397542..131397587, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:131397542..131397587, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.41e-10 | 253 |
epithelial cell of tracheobronchial tree | 1.49e-08 | 9 |
epithelial cell of lower respiratory tract | 1.49e-08 | 9 |
epithelial cell of lung | 6.36e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 7.51e-12 | 3 |
gall bladder primordium | 7.51e-12 | 3 |
biliary system | 8.15e-09 | 9 |
biliary tree | 8.15e-09 | 9 |
biliary bud | 8.15e-09 | 9 |
thoracic segment of trunk | 9.04e-09 | 52 |
breast | 7.42e-08 | 10 |
viscus | 1.74e-07 | 18 |
segment of respiratory tract | 1.81e-07 | 47 |
chest | 3.50e-07 | 11 |
respiratory primordium | 5.17e-07 | 38 |
endoderm of foregut | 5.17e-07 | 38 |
respiratory tract epithelium | 6.36e-07 | 19 |
lung epithelium | 6.36e-07 | 19 |
subdivision of trunk | 7.73e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.41e-19 | 4 |
breast cancer | 7.41e-19 | 4 |
carcinoma | 1.72e-16 | 106 |
adenocarcinoma | 6.18e-15 | 25 |
cell type cancer | 1.79e-11 | 143 |
bronchus cancer | 6.73e-11 | 7 |
bronchogenic carcinoma | 6.73e-11 | 7 |
cystadenocarcinoma | 3.83e-09 | 1 |
mucinous cystadenocarcinoma | 3.83e-09 | 1 |
cancer | 9.61e-07 | 235 |