FFCP PHASE1:Hg19::chr8:88823985..88824001,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:88823985..88824001,- | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_at_chr8:88823985..88824001,- | |||
|id=chr8:88823985..88824001,- | |||
|ontology_enrichment_celltype=CL:0000188!7.52e-14!9;CL:0000319!3.58e-09!1;CL:0000946!7.85e-09!1;CL:0000786!7.85e-09!1;CL:0000980!7.85e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:1000415;5.48e-18;2!CL:0000054;7.67e-18;2!CL:0000137;7.67e-18;2!CL:0000092;7.67e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.48e-18,2;CL:0000054,7.67e-18,2;CL:0000137,7.67e-18,2;CL:0000092,7.67e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.73e-08;5 | |||
|ontology_enrichment_disease=DOID:4231!5.32e-17!2;DOID:1907!5.32e-17!2;DOID:201!1.24e-12!6;DOID:0060100!1.24e-12!6;DOID:0060085!1.89e-09!1;DOID:3165!1.89e-09!1;DOID:0060121!1.89e-09!1;DOID:2438!1.89e-09!1;DOID:4418!1.89e-09!1;DOID:3030!3.58e-09!1;DOID:4960!4.54e-09!1;DOID:0070004!4.54e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.61e-34;1!DOID:3165;3.61e-34;1!DOID:0060121;3.61e-34;1!DOID:2438;3.61e-34;1!DOID:4418;3.61e-34;1!DOID:201;6.07e-23;6!DOID:0060100;6.07e-23;6!DOID:200;7.67e-18;2!DOID:4305;7.67e-18;2!DOID:4231;9.07e-18;2!DOID:1907;9.07e-18;2!DOID:0060072;1.32e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.61e-34,1;DOID:3165,3.61e-34,1;DOID:0060121,3.61e-34,1;DOID:2438,3.61e-34,1;DOID:4418,3.61e-34,1;DOID:201,6.07e-23,6;DOID:0060100,6.07e-23,6;DOID:200,7.67e-18,2;DOID:4305,7.67e-18,2;DOID:4231,9.07e-18,2;DOID:1907,9.07e-18,2;DOID:0060072,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007195!2.40e-09!1;UBERON:0001882!1.07e-08!1;UBERON:0005403!1.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.34e-34;1!UBERON:0002110;1.85e-12;3!UBERON:0002371;5.52e-12;12!UBERON:0000014;1.32e-09;4!UBERON:0001474;2.56e-08;18!UBERON:0002046;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1;UBERON:0002110,1.85e-12,3;UBERON:0006242,1.85e-12,3;UBERON:0000014,1.32e-09,4;UBERON:0002046,5.73e-08,5;UBERON:0004117,5.73e-08,5;UBERON:0007689,5.73e-08,5;UBERON:0007123,5.73e-08,5;UBERON:0003091,5.73e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96786529257474,0,0,11.1420760149632,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0.172214979660816,2.27006381426734,0.920529751259204,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07349410580417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:88823985..88824001,- | |||
}} |
Latest revision as of 20:21, 31 July 2015
Short description: | p@chr8:88823985..88824001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:88823985..88824001, - |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.48e-18 | 2 |
bone matrix secreting cell | 7.67e-18 | 2 |
osteocyte | 7.67e-18 | 2 |
osteoclast | 7.67e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.85e-34 | 1 |
gallbladder | 1.85e-12 | 3 |
gall bladder primordium | 1.85e-12 | 3 |
zone of skin | 1.32e-09 | 4 |
thyroid gland | 5.73e-08 | 5 |
pharyngeal pouch | 5.73e-08 | 5 |
thyroid diverticulum | 5.73e-08 | 5 |
pharyngeal pouch 2 | 5.73e-08 | 5 |
thyroid primordium | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.61e-34 | 1 |
skin benign neoplasm | 3.61e-34 | 1 |
integumentary system benign neoplasm | 3.61e-34 | 1 |
dermis tumor | 3.61e-34 | 1 |
cutaneous fibrous histiocytoma | 3.61e-34 | 1 |
connective tissue cancer | 6.07e-23 | 6 |
musculoskeletal system cancer | 6.07e-23 | 6 |
giant cell tumor | 7.67e-18 | 2 |
bone giant cell tumor | 7.67e-18 | 2 |
histiocytoma | 9.07e-18 | 2 |
malignant fibroxanthoma | 9.07e-18 | 2 |
benign neoplasm | 1.32e-09 | 4 |