FFCP PHASE1:Hg19::chr8:57354275..57354292,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354275..57354292,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354275..57354292,- | |description=CAGE_peak_at_chr8:57354275..57354292,- | ||
|id=chr8:57354275..57354292,- | |id=chr8:57354275..57354292,- | ||
|ontology_enrichment_celltype=CL:0000153!5.03e-20!9;CL:0000447!5.03e-20!9;CL:0000667!3.61e-16!6;CL:0000058!3.61e-16!6;CL:0000138!3.61e-16!6;CL:0000327!1.76e-12!14;CL:0000135!2.53e-12!3;CL:0000386!2.53e-12!3;CL:0000388!2.53e-12!3;CL:0000499!3.23e-12!27;CL:0002552!3.12e-07!5 | |ontology_enrichment_celltype=CL:0000153!5.03e-20!9;CL:0000447!5.03e-20!9;CL:0000667!3.61e-16!6;CL:0000058!3.61e-16!6;CL:0000138!3.61e-16!6;CL:0000327!1.76e-12!14;CL:0000135!2.53e-12!3;CL:0000386!2.53e-12!3;CL:0000388!2.53e-12!3;CL:0000499!3.23e-12!27;CL:0002552!3.12e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.44e-38;6!CL:0000153;3.74e-36;9!CL:0000447;3.74e-36;9!CL:0000135;7.48e-28;3!CL:0000388;7.48e-28;3!CL:0000499;3.98e-25;28!CL:0000327;1.44e-21;15!CL:0002556;3.14e-14;6!CL:0002552;4.21e-08;5!CL:0000151;8.03e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.47e-38,6;CL:0000138,5.47e-38,6;CL:0000153,4.65e-36,9;CL:0000447,4.65e-36,9;CL:0000135,6.24e-28,3;CL:0000388,6.24e-28,3;CL:0000499,4.17e-25,28;CL:0000327,1.64e-21,15;CL:0002556,3.14e-14,6;CL:0000151,1.02e-08,36;CL:0002552,3.92e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;6.73e-11;1!UBERON:0003852;6.73e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!3.74e-18!7;UBERON:0000369!3.64e-15!4;UBERON:0002435!3.64e-15!4;UBERON:0000204!3.64e-15!4;UBERON:0010082!3.64e-15!4;UBERON:0002308!5.67e-14!9;UBERON:0002420!5.67e-14!9;UBERON:0000125!5.67e-14!9;UBERON:0007245!5.67e-14!9;UBERON:0010009!5.67e-14!9;UBERON:0010011!5.67e-14!9;UBERON:0000454!5.67e-14!9;UBERON:0000043!2.53e-12!3;UBERON:0005383!4.94e-12!3;UBERON:0005382!4.94e-12!3;UBERON:0001873!1.29e-08!2;UBERON:0010122!1.29e-08!2;UBERON:0001017!5.42e-08!82;UBERON:0001875!7.62e-08!2;UBERON:0006514!7.62e-08!2;UBERON:0002780!7.96e-08!41;UBERON:0001890!7.96e-08!41;UBERON:0006240!7.96e-08!41;UBERON:0003080!1.36e-07!42;UBERON:0005743!1.83e-07!86;UBERON:0000073!2.37e-07!94;UBERON:0001016!2.37e-07!94;UBERON:0001049!2.76e-07!57;UBERON:0005068!2.76e-07!57;UBERON:0006241!2.76e-07!57;UBERON:0007135!2.76e-07!57;UBERON:0000924!2.83e-07!173;UBERON:0006601!2.83e-07!173;UBERON:0001869!5.51e-07!32;UBERON:0002791!9.81e-07!33 | |ontology_enrichment_uberon=UBERON:0009663!3.74e-18!7;UBERON:0000369!3.64e-15!4;UBERON:0002435!3.64e-15!4;UBERON:0000204!3.64e-15!4;UBERON:0010082!3.64e-15!4;UBERON:0002308!5.67e-14!9;UBERON:0002420!5.67e-14!9;UBERON:0000125!5.67e-14!9;UBERON:0007245!5.67e-14!9;UBERON:0010009!5.67e-14!9;UBERON:0010011!5.67e-14!9;UBERON:0000454!5.67e-14!9;UBERON:0000043!2.53e-12!3;UBERON:0005383!4.94e-12!3;UBERON:0005382!4.94e-12!3;UBERON:0001873!1.29e-08!2;UBERON:0010122!1.29e-08!2;UBERON:0001017!5.42e-08!82;UBERON:0001875!7.62e-08!2;UBERON:0006514!7.62e-08!2;UBERON:0002780!7.96e-08!41;UBERON:0001890!7.96e-08!41;UBERON:0006240!7.96e-08!41;UBERON:0003080!1.36e-07!42;UBERON:0005743!1.83e-07!86;UBERON:0000073!2.37e-07!94;UBERON:0001016!2.37e-07!94;UBERON:0001049!2.76e-07!57;UBERON:0005068!2.76e-07!57;UBERON:0006241!2.76e-07!57;UBERON:0007135!2.76e-07!57;UBERON:0000924!2.83e-07!173;UBERON:0006601!2.83e-07!173;UBERON:0001869!5.51e-07!32;UBERON:0002791!9.81e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.48e-28;3!UBERON:0000043;7.48e-28;3!UBERON:0007845;7.48e-28;3!UBERON:0001758;3.14e-14;6!UBERON:0003672;3.14e-14;6!UBERON:0011137;1.31e-13;11!UBERON:0010323;1.31e-13;11!UBERON:0005383;3.91e-13;3!UBERON:0005382;3.91e-13;3!UBERON:0003129;2.81e-12;7!UBERON:0005705;6.73e-11;1!UBERON:0008193;6.73e-11;1!UBERON:0010912;6.73e-11;1!UBERON:0002514;6.73e-11;1!UBERON:0003457;6.73e-11;1!UBERON:0008907;6.73e-11;1!UBERON:0008001;6.73e-11;1!UBERON:0007213;6.73e-11;1!UBERON:0009891;6.73e-11;1!UBERON:0007914;6.73e-11;1!UBERON:0007375;6.73e-11;1!UBERON:0003323;6.73e-11;1!UBERON:0010258;6.73e-11;1!UBERON:0005253;6.73e-11;1!UBERON:0007842;6.73e-11;1!UBERON:0002397;6.73e-11;1!UBERON:0003113;6.73e-11;1!UBERON:0003277;6.73e-11;1!UBERON:0001709;6.73e-11;1!UBERON:0002244;6.73e-11;1!UBERON:0005620;6.73e-11;1!UBERON:0010364;6.73e-11;1!UBERON:0004288;6.73e-11;1!UBERON:0001874;2.62e-10;1!UBERON:0000369;4.44e-10;4!UBERON:0002435;4.44e-10;4!UBERON:0000204;4.44e-10;4!UBERON:0000075;2.05e-09;16!UBERON:0000165;6.02e-08;28!UBERON:0001434;3.74e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.24e-28,3;UBERON:0000043,6.24e-28,3;UBERON:0007845,6.24e-28,3;UBERON:0001758,3.14e-14,6;UBERON:0003672,3.14e-14,6;UBERON:0010323,1.31e-13,11;UBERON:0005383,4.84e-13,3;UBERON:0005382,4.84e-13,3;UBERON:0003129,2.81e-12,7;UBERON:0000165,6.72e-11,29;UBERON:0000930,6.72e-11,29;UBERON:0005705,6.73e-11,1;UBERON:0008193,6.73e-11,1;UBERON:0010912,6.73e-11,1;UBERON:0002514,6.73e-11,1;UBERON:0003457,6.73e-11,1;UBERON:0008907,6.73e-11,1;UBERON:0008001,6.73e-11,1;UBERON:0007213,6.73e-11,1;UBERON:0009891,6.73e-11,1;UBERON:0007914,6.73e-11,1;UBERON:0009292,6.73e-11,1;UBERON:0003099,6.73e-11,1;UBERON:0007375,6.73e-11,1;UBERON:0003323,6.73e-11,1;UBERON:0010258,6.73e-11,1;UBERON:0007842,6.73e-11,1;UBERON:0009494,6.73e-11,1;UBERON:0010042,6.73e-11,1;UBERON:0010045,6.73e-11,1;UBERON:0010259,6.73e-11,1;UBERON:0010359,6.73e-11,1;UBERON:0009526,6.73e-11,1;UBERON:0002397,6.73e-11,1;UBERON:0003113,6.73e-11,1;UBERON:0003277,6.73e-11,1;UBERON:0001709,6.73e-11,1;UBERON:0004066,6.73e-11,1;UBERON:0002244,6.73e-11,1;UBERON:0005620,6.73e-11,1;UBERON:0004362,6.73e-11,1;UBERON:0010364,6.73e-11,1;UBERON:0010046,6.73e-11,1;UBERON:0005868,6.73e-11,1;UBERON:0007238,6.73e-11,1;UBERON:0004288,6.73e-11,1;UBERON:0004068,6.73e-11,1;UBERON:0010334,6.73e-11,1;UBERON:0003852,6.73e-11,1;UBERON:0010253,6.73e-11,1;UBERON:0011137,9.80e-11,14;UBERON:0001874,3.61e-10,1;UBERON:0000369,5.21e-10,4;UBERON:0002435,5.21e-10,4;UBERON:0000204,5.21e-10,4;UBERON:0010082,5.21e-10,4;UBERON:0000075,2.05e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,5.21447468258965,2.3858578411533,13.6257763684738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,1.18800285728205,1.97813543422845,0,0,0,0,0,1.31693286264251,3.67785354958824,1.50238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0.664225598535437,1.84369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.29133233388275,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.597019211547496,0,0,0.568209015825267,1.0062716070103,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.48802444071178,0,0,0,0,0,26.803371720492,0,0.385375350578757,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0.588925401344836,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,5.21447468258965,2.3858578411533,13.6257763684738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,1.18800285728205,1.97813543422845,0,0,0,0,0,1.31693286264251,3.67785354958824,1.50238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0.664225598535437,1.84369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.29133233388275,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.597019211547496,0,0,0.568209015825267,1.0062716070103,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.48802444071178,0,0,0,0,0,26.803371720492,0,0.385375350578757,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0.588925401344836,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:57354275..57354292,- | |short_description=p@chr8:57354275..57354292,- | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354275..57354292, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354275..57354292, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.47e-38 | 6 |
chondrocyte | 5.47e-38 | 6 |
GAG secreting cell | 4.65e-36 | 9 |
carbohydrate secreting cell | 4.65e-36 | 9 |
fibrocyte | 6.24e-28 | 3 |
tendon cell | 6.24e-28 | 3 |
stromal cell | 4.17e-25 | 28 |
extracellular matrix secreting cell | 1.64e-21 | 15 |
fibroblast of periodontium | 3.14e-14 | 6 |
secretory cell | 1.02e-08 | 36 |
fibroblast of gingiva | 3.92e-08 | 5 |