FFCP PHASE1:Hg19::chr8:57354186..57354207,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354186..57354207,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354186..57354207,- | |description=CAGE_peak_at_chr8:57354186..57354207,- | ||
|id=chr8:57354186..57354207,- | |id=chr8:57354186..57354207,- | ||
|ontology_enrichment_celltype=CL:0000153!3.70e-11!9;CL:0000447!3.70e-11!9;CL:0000499!1.18e-09!27;CL:0000667!2.80e-09!6;CL:0000058!2.80e-09!6;CL:0000138!2.80e-09!6;CL:0002540!6.93e-08!6;CL:0000540!1.72e-07!6;CL:0000031!1.72e-07!6;CL:0000404!1.72e-07!6;CL:0000135!2.92e-07!3;CL:0000386!2.92e-07!3;CL:0000388!2.92e-07!3 | |ontology_enrichment_celltype=CL:0000153!3.70e-11!9;CL:0000447!3.70e-11!9;CL:0000499!1.18e-09!27;CL:0000667!2.80e-09!6;CL:0000058!2.80e-09!6;CL:0000138!2.80e-09!6;CL:0002540!6.93e-08!6;CL:0000540!1.72e-07!6;CL:0000031!1.72e-07!6;CL:0000404!1.72e-07!6;CL:0000135!2.92e-07!3;CL:0000386!2.92e-07!3;CL:0000388!2.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.53e-28;9!CL:0000447;1.53e-28;9!CL:0000138;6.54e-23;6!CL:0000499;2.39e-17;28!CL:0000327;9.30e-17;15!CL:0000135;9.44e-17;3!CL:0000388;9.44e-17;3!CL:0002552;6.96e-10;5!CL:0002556;1.08e-08;6!CL:0000214;9.72e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.44e-28,9;CL:0000447,1.44e-28,9;CL:0000058,6.40e-23,6;CL:0000138,6.40e-23,6;CL:0000499,2.24e-17,28;CL:0000135,8.49e-17,3;CL:0000388,8.49e-17,3;CL:0000327,8.97e-17,15;CL:0002552,6.54e-10,5;CL:0002556,1.15e-08,6;CL:0000214,9.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.41e-11;2!UBERON:0003099;5.58e-07;1!UBERON:0003852;5.58e-07;1!UBERON:0006222;8.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-15!57;UBERON:0005068!1.02e-15!57;UBERON:0006241!1.02e-15!57;UBERON:0007135!1.02e-15!57;UBERON:0001017!1.53e-14!82;UBERON:0002020!1.56e-14!34;UBERON:0003528!1.56e-14!34;UBERON:0005743!1.85e-13!86;UBERON:0002780!6.52e-13!41;UBERON:0001890!6.52e-13!41;UBERON:0006240!6.52e-13!41;UBERON:0001869!1.58e-12!32;UBERON:0003080!1.77e-12!42;UBERON:0000073!2.20e-12!94;UBERON:0001016!2.20e-12!94;UBERON:0002791!5.09e-12!33;UBERON:0001893!1.53e-11!34;UBERON:0002616!3.67e-11!59;UBERON:0002346!6.91e-10!90;UBERON:0002308!1.09e-09!9;UBERON:0000125!1.09e-09!9;UBERON:0000924!5.40e-09!173;UBERON:0006601!5.40e-09!173;UBERON:0003075!6.72e-09!86;UBERON:0007284!6.72e-09!86;UBERON:0000369!1.09e-08!4;UBERON:0002435!1.09e-08!4;UBERON:0000204!1.09e-08!4;UBERON:0010082!1.09e-08!4;UBERON:0001950!1.23e-08!20;UBERON:0000955!1.87e-08!69;UBERON:0006238!1.87e-08!69;UBERON:0004121!3.49e-08!169;UBERON:0000956!9.54e-08!25;UBERON:0000203!9.54e-08!25;UBERON:0002619!1.17e-07!22;UBERON:0002420!2.29e-07!9;UBERON:0007245!2.29e-07!9;UBERON:0010009!2.29e-07!9;UBERON:0010011!2.29e-07!9;UBERON:0000454!2.29e-07!9;UBERON:0000033!2.50e-07!123;UBERON:0000043!2.92e-07!3;UBERON:0009663!3.18e-07!7;UBERON:0005383!4.97e-07!3;UBERON:0005382!4.97e-07!3;UBERON:0003056!4.98e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.03e-20;4!UBERON:0002435;1.03e-20;4!UBERON:0000204;1.03e-20;4!UBERON:0009663;5.73e-18;7!UBERON:0007846;9.44e-17;3!UBERON:0000043;9.44e-17;3!UBERON:0007845;9.44e-17;3!UBERON:0005383;3.24e-16;3!UBERON:0005382;3.24e-16;3!UBERON:0002420;6.18e-14;9!UBERON:0000125;6.18e-14;9!UBERON:0007245;6.18e-14;9!UBERON:0002308;6.18e-14;9!UBERON:0010009;6.18e-14;9!UBERON:0010011;6.18e-14;9!UBERON:0000454;6.18e-14;9!UBERON:0001873;2.41e-11;2!UBERON:0001758;1.08e-08;6!UBERON:0003672;1.08e-08;6!UBERON:0011137;4.03e-08;11!UBERON:0010323;4.03e-08;11!UBERON:0006915;9.72e-08;3!UBERON:0007616;9.72e-08;3!UBERON:0002217;9.72e-08;3!UBERON:0002018;9.72e-08;3!UBERON:0003129;1.65e-07;7!UBERON:0001434;3.61e-07;36!UBERON:0005705;5.58e-07;1!UBERON:0008193;5.58e-07;1!UBERON:0010912;5.58e-07;1!UBERON:0002514;5.58e-07;1!UBERON:0003457;5.58e-07;1!UBERON:0008907;5.58e-07;1!UBERON:0008001;5.58e-07;1!UBERON:0007213;5.58e-07;1!UBERON:0009891;5.58e-07;1!UBERON:0007914;5.58e-07;1!UBERON:0007375;5.58e-07;1!UBERON:0003323;5.58e-07;1!UBERON:0010258;5.58e-07;1!UBERON:0005253;5.58e-07;1!UBERON:0007842;5.58e-07;1!UBERON:0002397;5.58e-07;1!UBERON:0003113;5.58e-07;1!UBERON:0003277;5.58e-07;1!UBERON:0001709;5.58e-07;1!UBERON:0002244;5.58e-07;1!UBERON:0005620;5.58e-07;1!UBERON:0010364;5.58e-07;1!UBERON:0004288;5.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.34e-20,4;UBERON:0002435,1.34e-20,4;UBERON:0000204,1.34e-20,4;UBERON:0010082,1.34e-20,4;UBERON:0009663,7.00e-18,7;UBERON:0007846,8.49e-17,3;UBERON:0000043,8.49e-17,3;UBERON:0007845,8.49e-17,3;UBERON:0005383,3.51e-16,3;UBERON:0005382,3.51e-16,3;UBERON:0002420,7.21e-14,9;UBERON:0000125,7.21e-14,9;UBERON:0007245,7.21e-14,9;UBERON:0002308,7.21e-14,9;UBERON:0010009,7.21e-14,9;UBERON:0010011,7.21e-14,9;UBERON:0000454,7.21e-14,9;UBERON:0001873,2.54e-11,2;UBERON:0010122,2.54e-11,2;UBERON:0001758,1.15e-08,6;UBERON:0003672,1.15e-08,6;UBERON:0000165,4.08e-08,29;UBERON:0000930,4.08e-08,29;UBERON:0010323,4.22e-08,11;UBERON:0006915,9.40e-08,3;UBERON:0007616,9.40e-08,3;UBERON:0002217,9.40e-08,3;UBERON:0002018,9.40e-08,3;UBERON:0003129,1.74e-07,7;UBERON:0005705,5.58e-07,1;UBERON:0008193,5.58e-07,1;UBERON:0010912,5.58e-07,1;UBERON:0002514,5.58e-07,1;UBERON:0003457,5.58e-07,1;UBERON:0008907,5.58e-07,1;UBERON:0008001,5.58e-07,1;UBERON:0007213,5.58e-07,1;UBERON:0009891,5.58e-07,1;UBERON:0007914,5.58e-07,1;UBERON:0009292,5.58e-07,1;UBERON:0003099,5.58e-07,1;UBERON:0007375,5.58e-07,1;UBERON:0003323,5.58e-07,1;UBERON:0010258,5.58e-07,1;UBERON:0007842,5.58e-07,1;UBERON:0009494,5.58e-07,1;UBERON:0010042,5.58e-07,1;UBERON:0010045,5.58e-07,1;UBERON:0010259,5.58e-07,1;UBERON:0010359,5.58e-07,1;UBERON:0009526,5.58e-07,1;UBERON:0002397,5.58e-07,1;UBERON:0003113,5.58e-07,1;UBERON:0003277,5.58e-07,1;UBERON:0001709,5.58e-07,1;UBERON:0004066,5.58e-07,1;UBERON:0002244,5.58e-07,1;UBERON:0005620,5.58e-07,1;UBERON:0004362,5.58e-07,1;UBERON:0010364,5.58e-07,1;UBERON:0010046,5.58e-07,1;UBERON:0005868,5.58e-07,1;UBERON:0007238,5.58e-07,1;UBERON:0004288,5.58e-07,1;UBERON:0004068,5.58e-07,1;UBERON:0010334,5.58e-07,1;UBERON:0003852,5.58e-07,1;UBERON:0010253,5.58e-07,1 | |||
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|short_description=p@chr8:57354186..57354207,- | |short_description=p@chr8:57354186..57354207,- | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354186..57354207, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354186..57354207, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.44e-28 | 9 |
carbohydrate secreting cell | 1.44e-28 | 9 |
chondroblast | 6.40e-23 | 6 |
chondrocyte | 6.40e-23 | 6 |
stromal cell | 2.24e-17 | 28 |
fibrocyte | 8.49e-17 | 3 |
tendon cell | 8.49e-17 | 3 |
extracellular matrix secreting cell | 8.97e-17 | 15 |
fibroblast of gingiva | 6.54e-10 | 5 |
fibroblast of periodontium | 1.15e-08 | 6 |
synovial cell | 9.40e-08 | 3 |